BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0760.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778156.1| threonine efflux protein [Herbaspirillum ser... 302 5e-80 ref|YP_004755047.1| lysine exporter protein LysE/YggA [Collimona... 258 8e-67 ref|YP_001974309.1| putative LysE family transport-related trans... 166 3e-39 ref|ZP_05133722.1| lysine exporter protein [Stenotrophomonas sp.... 165 6e-39 ref|YP_968442.1| lysine exporter protein LysE/YggA [Acidovorax c... 155 5e-36 >ref|YP_003778156.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ66248.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] Length = 210 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 198/210 (94%), Positives = 205/210 (97%) Query: 86 MQAIFHSLGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGGLRGGFMAQAGLMLGDIVL 145 MQA+FHSLGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGG+RGGF AQAGLMLGD+VL Sbjct: 1 MQALFHSLGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGGVRGGFAAQAGLMLGDVVL 60 Query: 146 MFLAAAGVAALLHANPLLFHGLQYLGAAYLAYLGGRLLFARGEGGGTVVPFSNAADFRRG 205 MFLAAAGVAALLHANPLLFHGLQYLGAAYLAYLG RLLFARGEGGGTVVPFSNAA+FRRG Sbjct: 61 MFLAAAGVAALLHANPLLFHGLQYLGAAYLAYLGARLLFARGEGGGTVVPFSNAAEFRRG 120 Query: 206 FLVTLFNPKAIVFYMAFFPLFLDPATQQGALTFFTMGAVISSCTLLYGSLLVIVGNAAAR 265 FLVTLFNPKAIVFYMAFFPLFLDPATQQGALTF TMGAVIS CT LYGS+LV+VGNAAAR Sbjct: 121 FLVTLFNPKAIVFYMAFFPLFLDPATQQGALTFITMGAVISCCTFLYGSVLVMVGNAAAR 180 Query: 266 RMARNRTIAKLASRAAGVFLIGFGIKLTTQ 295 RMARNRTIA+LASRAAGVFLIGFGIKLTTQ Sbjct: 181 RMARNRTIARLASRAAGVFLIGFGIKLTTQ 210 >ref|YP_004755047.1| lysine exporter protein LysE/YggA [Collimonas fungivorans Ter331] gb|AEK64224.1| Lysine exporter protein (LYSE/YGGA) [Collimonas fungivorans Ter331] Length = 211 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 149/210 (70%), Positives = 173/210 (82%), Gaps = 1/210 (0%) Query: 86 MQAIFHSLGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGGLRGGFMAQAGLMLGDIVL 145 M A FH+LGITD+WQLI ATMVFL LPG GTFC+LT A + G+RGG+ + G+MLGD VL Sbjct: 1 MSAFFHTLGITDVWQLIVATMVFLALPGAGTFCILTSAGREGVRGGYASLFGIMLGDAVL 60 Query: 146 MFLAAAGVAALLHANPLLFHGLQYLGAAYLAYLGGRLLFAR-GEGGGTVVPFSNAADFRR 204 MFLAA GVAALL ANP++F +QYLGAAYLAYLG +LLFAR GEG V F+ ++F R Sbjct: 61 MFLAAIGVAALLTANPMVFKAVQYLGAAYLAYLGCKLLFARKGEGASAAVGFTGVSNFTR 120 Query: 205 GFLVTLFNPKAIVFYMAFFPLFLDPATQQGALTFFTMGAVISSCTLLYGSLLVIVGNAAA 264 GFLVTL NPKAIVFYMAFFPLF+DPATQ+G+LTF TM A+ISSC L YGSLLV++GN AA Sbjct: 121 GFLVTLVNPKAIVFYMAFFPLFIDPATQRGSLTFLTMAAIISSCALFYGSLLVLLGNTAA 180 Query: 265 RRMARNRTIAKLASRAAGVFLIGFGIKLTT 294 +R+ NR IA ASRAAG+FLIGFGIKLTT Sbjct: 181 KRLGHNRRIAAFASRAAGIFLIGFGIKLTT 210 >ref|YP_001974309.1| putative LysE family transport-related transmembrane protein [Stenotrophomonas maltophilia K279a] ref|YP_002030410.1| lysine exporter protein LysE/YggA [Stenotrophomonas maltophilia R551-3] ref|YP_004794612.1| lysine exporter protein LysE/YggA [Burkholderia sp. JV3] emb|CAQ48034.1| putative LysE family transport-related transmembrane protein [Stenotrophomonas maltophilia K279a] gb|ACF53727.1| Lysine exporter protein (LYSE/YGGA) [Stenotrophomonas maltophilia R551-3] gb|AEM53386.1| Lysine exporter protein (LYSE/YGGA) [Burkholderia sp. JV3] Length = 209 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 103/202 (50%), Positives = 137/202 (67%), Gaps = 2/202 (0%) Query: 93 LGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGGLRGGFMAQAGLMLGDIVLMFLAAAG 152 +GI D+W + A +VFL LPGPGTF +LT +GG+RGG+ A AGL++GD +LM+LA AG Sbjct: 4 MGIQDLWTFLVAVLVFLALPGPGTFTLLTATGRGGVRGGYTALAGLLVGDQILMWLALAG 63 Query: 153 VAALLHANPLLFHGLQYLGAAYLAYLGGRLLFARGEGGGTVVPFSNAAD--FRRGFLVTL 210 VAALL ANPL+FH +QYLGAAYL ++G LL GG P F++ LV+L Sbjct: 64 VAALLKANPLVFHAVQYLGAAYLVWVGISLLRTPKHEGGDAGPIRMQPGRYFQQAILVSL 123 Query: 211 FNPKAIVFYMAFFPLFLDPATQQGALTFFTMGAVISSCTLLYGSLLVIVGNAAARRMARN 270 NPKAI+FYMAF PLF+DP QG TF + +I ++ Y S+L+ VGN A RR+ ++ Sbjct: 124 LNPKAILFYMAFLPLFIDPKAHQGIATFAALAGIILVVSIAYCSMLIGVGNLARRRLIQH 183 Query: 271 RTIAKLASRAAGVFLIGFGIKL 292 I+ R AG+FL+GFGI+L Sbjct: 184 PRISDALRRVAGLFLVGFGIRL 205 >ref|ZP_05133722.1| lysine exporter protein [Stenotrophomonas sp. SKA14] gb|EED37783.1| lysine exporter protein [Stenotrophomonas sp. SKA14] Length = 209 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 102/202 (50%), Positives = 136/202 (67%), Gaps = 2/202 (0%) Query: 93 LGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGGLRGGFMAQAGLMLGDIVLMFLAAAG 152 +GI D+W + A +VFL LPGPGTF +LT +GG+RGG+ A GL++GD +LM+LA AG Sbjct: 4 MGIQDLWTFLVAVLVFLALPGPGTFTLLTATGRGGVRGGYTALVGLLVGDQILMWLALAG 63 Query: 153 VAALLHANPLLFHGLQYLGAAYLAYLGGRLLFARGEGGGTVVPFSNAAD--FRRGFLVTL 210 VAALL ANPL+FH +QYLGAAYL ++G LL GG P F++ LV+L Sbjct: 64 VAALLKANPLVFHAVQYLGAAYLVWVGISLLRTPKHEGGEAGPIRMQPGRYFQQAILVSL 123 Query: 211 FNPKAIVFYMAFFPLFLDPATQQGALTFFTMGAVISSCTLLYGSLLVIVGNAAARRMARN 270 NPKAI+FYMAF PLF+DP QG TF + +I ++ Y S+L+ VGN A RR+ ++ Sbjct: 124 LNPKAILFYMAFLPLFIDPKAHQGIATFAALAGIILVVSIAYCSMLIGVGNLARRRLIQH 183 Query: 271 RTIAKLASRAAGVFLIGFGIKL 292 I+ R AG+FL+GFGI+L Sbjct: 184 PRISDALRRVAGLFLVGFGIRL 205 >ref|YP_968442.1| lysine exporter protein LysE/YggA [Acidovorax citrulli AAC00-1] gb|ABM30668.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax citrulli AAC00-1] Length = 204 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 97/200 (48%), Positives = 130/200 (65%), Gaps = 1/200 (0%) Query: 93 LGITDIWQLIAATMVFLLLPGPGTFCVLTCAAKGGLRGGFMAQAGLMLGDIVLMFLAAAG 152 GI D +AA ++FL +PGPG ++T KGG+R G A G++ GD VL+++A AG Sbjct: 2 FGIADYGAFVAAILLFLAIPGPGNLALVTSTGKGGVRAGMAATLGVIAGDQVLLWMAVAG 61 Query: 153 VAALLHANPLLFHGLQYLGAAYLAYLGGRLLFARGEGGGTVVPFSNAADFRRGFLVTLFN 212 VAA+L A P +FH +Q+LGAAYLA++GGR+L AR G V+ FR+ L+TL N Sbjct: 62 VAAMLSAVPAVFHAVQWLGAAYLAWMGGRMLLAR-PGSAPVIAIQPRHYFRQAALITLLN 120 Query: 213 PKAIVFYMAFFPLFLDPATQQGALTFFTMGAVISSCTLLYGSLLVIVGNAAARRMARNRT 272 PKAI+FYMAFFPLF+DPA +G LTF M A I+ + YG +V++ + A RM Sbjct: 121 PKAIMFYMAFFPLFVDPARHRGLLTFGVMAATIAVLSFFYGLGVVLLTHRMAERMRARPA 180 Query: 273 IAKLASRAAGVFLIGFGIKL 292 + + R AG FLIGFGIKL Sbjct: 181 LGRALERLAGTFLIGFGIKL 200