BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0758.p (236 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774073.1| two component response regulator protein [He... 409 e-112 ref|YP_001100873.1| OmpR family response regulator [Herminiimona... 392 e-107 ref|YP_004754468.1| response regulators consisting of a CheY-lik... 391 e-107 ref|YP_001354553.1| two-components system response regulator [Ja... 391 e-107 ref|ZP_08273335.1| Response regulators consisting of a CheY-like... 387 e-106 >ref|YP_003774073.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62165.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] Length = 237 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 221/223 (99%), Positives = 223/223 (100%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIKHGPLSFDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVI+HGPLS+DQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPE 223 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPE Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPE 223 >ref|YP_001100873.1| OmpR family response regulator [Herminiimonas arsenicoxydans] emb|CAL62752.1| Transcriptional regulatory protein TctD [Herminiimonas arsenicoxydans] Length = 233 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 206/223 (92%), Positives = 215/223 (96%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGY DCVKNGVEADSALSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYVTDCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRALTRRGA Sbjct: 61 EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIKHGPLSFDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVIKHGPLS+DQVGRIAYI +QMLELSARELGLLEVLLQR+GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINDQMLELSARELGLLEVLLQRSGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPE 223 W EEVSNNAIEVYVHRLRKKIE+GG+RIATVRGLGYCLEK E Sbjct: 181 WSEEVSNNAIEVYVHRLRKKIEIGGLRIATVRGLGYCLEKFAE 223 >ref|YP_004754468.1| response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein [Collimonas fungivorans Ter331] gb|AEK63645.1| Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein [Collimonas fungivorans Ter331] Length = 247 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 210/223 (94%), Positives = 217/223 (97%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCV NG+EADSALSTQDFDLLILDLGLPKM+GL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVMNGMEADSALSTQDFDLLILDLGLPKMTGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNSRLPVLILTAADS+EQRV+GLDLGADDYMAKPF LSELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSRLPVLILTAADSLEQRVKGLDLGADDYMAKPFELSELEARVRALTRRGA 120 Query: 121 GGGPTVIKHGPLSFDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVIKHGPLS+DQVGRIAYI EQML+LSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINEQMLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPE 223 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEK+ E Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKISE 223 >ref|YP_001354553.1| two-components system response regulator [Janthinobacterium sp. Marseille] gb|ABR89837.1| two-components system response regulator [Janthinobacterium sp. Marseille] Length = 233 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 205/230 (89%), Positives = 216/230 (93%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCVKNG EADS LSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVKNGAEADSVLSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRALTRRGA Sbjct: 61 EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIKHGPLSFDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVIKHGPLS+DQVGRIAYI +QML+LSARELGLLEVLLQR+GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINDQMLDLSARELGLLEVLLQRSGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPENGAAPLA 230 W EEVSNNAIEVYVHRLRKKIE+GG+RIATVRGLGYCLEK E +A Sbjct: 181 WSEEVSNNAIEVYVHRLRKKIEIGGLRIATVRGLGYCLEKFTETAPNTIA 230 >ref|ZP_08273335.1| Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Oxalobacteraceae bacterium IMCC9480] gb|EGF33207.1| Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Oxalobacteraceae bacterium IMCC9480] Length = 228 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 206/227 (90%), Positives = 216/227 (95%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCV NGVEAD ALSTQDFDLLILDLGLP+MSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVHNGVEADLALSTQDFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLR+LRARNS LPVLILTAADS+EQRV+GLDLGADDYMAKPFALSELEARVRALTRRG Sbjct: 61 EVLRKLRARNSHLPVLILTAADSIEQRVKGLDLGADDYMAKPFALSELEARVRALTRRGV 120 Query: 121 GGGPTVIKHGPLSFDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV++HGPLS+DQVGRIAYI EQML+LSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGPLSYDQVGRIAYINEQMLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPENGAA 227 WGEEVSNNAIEVYVHRLRKKIE+GGVRIATVRGLGYCLEK + AA Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIELGGVRIATVRGLGYCLEKYIDAPAA 227