BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0757.p (533 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774072.1| two component transmembrane sensor histidine... 667 0.0 ref|YP_004754469.1| putative two-component sensor kinase transcr... 637 e-180 ref|ZP_08273334.1| putative two-component sensor kinase transcri... 636 e-180 ref|YP_001354554.1| sensor histidine kinase transcription regula... 592 e-167 ref|YP_001100874.1| putative two-component sensor kinase transcr... 591 e-166 >ref|YP_003774072.1| two component transmembrane sensor histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ62164.1| two component transmembrane sensor histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 390 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 364/390 (93%), Positives = 373/390 (95%), Gaps = 2/390 (0%) Query: 146 MPQPPADEDRITLGTVQFRNDILHGSDVRIATLQVDLRRSAAQRAAQREPRIATVQVGET 205 MPQPP DEDR T+GTVQFRNDILHGSDVRIATLQVDLRRSAAQRAA REPR+ATVQVGET Sbjct: 1 MPQPPPDEDRSTVGTVQFRNDILHGSDVRIATLQVDLRRSAAQRAASREPRLATVQVGET 60 Query: 206 LEKRAQLANEIIKGVILPQFVILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPID 265 LEKRAQLANEIIKGVILPQF+ILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPID Sbjct: 61 LEKRAQLANEIIKGVILPQFIILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPID 120 Query: 266 SGQVPEEISPLVRSLNDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELALRQDDQ 325 SGQVPEEISPLVRSLNDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELALRQDDQ Sbjct: 121 SGQVPEEISPLVRSLNDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELALRQDDQ 180 Query: 326 DDVRRSLEQLAKSSETATRLVNQLLSLARAENQTPATAPFEPIELSELARSVVQDWVPMS 385 DVRRSLEQLAKSSETATRLVNQLLSLARAENQ + P+EL+ELARSVVQDWVPMS Sbjct: 181 VDVRRSLEQLAKSSETATRLVNQLLSLARAENQQSQSGGMIPVELNELARSVVQDWVPMS 240 Query: 386 FTQRIDLGFEQPDHPILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRARTDEGGGL 445 FTQRIDLGFEQPDHPILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRARTDEGGGL Sbjct: 241 FTQRIDLGFEQPDHPILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRARTDEGGGL 300 Query: 446 AILEVEDNGPGIPVAERTNVFERFYRILGTPSTGS--GLGLAIVREIAQQHEAIVEITHN 503 AILEVEDNGPGIPVAER NVFERFYRILGTPSTGS GLGLAIVREIAQQHEA +EIT N Sbjct: 301 AILEVEDNGPGIPVAERANVFERFYRILGTPSTGSGLGLGLAIVREIAQQHEAALEITSN 360 Query: 504 PRSSDPKYPGSLFRVSFRMMPRTPFFDDIT 533 PRS+DPKYPG +FRVSFRMMPRTPFFDDIT Sbjct: 361 PRSTDPKYPGCVFRVSFRMMPRTPFFDDIT 390 >ref|YP_004754469.1| putative two-component sensor kinase transcriptional regulatory protein [Collimonas fungivorans Ter331] gb|AEK63646.1| putative two-component sensor kinase transcriptional regulatory protein [Collimonas fungivorans Ter331] Length = 518 Score = 637 bits (1643), Expect = e-180, Method: Composition-based stats. Identities = 356/496 (71%), Positives = 410/496 (82%), Gaps = 12/496 (2%) Query: 40 ATQPVERIQRSLFGEILDWMLAPLLLLWPMSIAITYLIAQSIANQPFDRALEDSVTVLAQ 99 A Q ER+QRSLFGEILDWML PLLLLWP+SIAITY++A+SIANQPFD+AL+DSVTVL+Q Sbjct: 15 AAQTEERVQRSLFGEILDWMLVPLLLLWPISIAITYVVAKSIANQPFDQALDDSVTVLSQ 74 Query: 100 QVSEVNGKVVARLPVSARDLLRADDIDNIYYKVTGPNGEYVEGDVDMPQPPADEDRITL- 158 QVSEVNGKV+ RL +RD LRADD+DN+YY +TGP+GEY++GD DM PP ED Sbjct: 75 QVSEVNGKVLTRLTTPSRDFLRADDVDNVYYLITGPHGEYIDGDRDMHSPPVAEDEPAHP 134 Query: 159 GTVQFRNDILHGSDVRIATLQVDLRRSA-----AQRAAQREPRIATVQVGETLEKRAQLA 213 G V+F + LHGSDVRIA VDLR + + Q PR+A VQVGETLEKRA+LA Sbjct: 135 GKVKFWDSSLHGSDVRIAYTYVDLRNTVDNTVDVAASQQERPRVALVQVGETLEKRARLA 194 Query: 214 NEIIKGVILPQFVILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPIDSGQVPEEI 273 NEIIKGVILPQF+ILP+ALAL+WFALSRGLSPLSELQQRIRARRPDDLSPIDSGQVPEEI Sbjct: 195 NEIIKGVILPQFLILPIALALIWFALSRGLSPLSELQQRIRARRPDDLSPIDSGQVPEEI 254 Query: 274 SPLVRSLNDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELALRQDDQDDVRRSLE 333 SPLVRSLNDML+RLS +I QKRFIADAAHQMKTPLAGMRMQSELALRQ Q D+ RSLE Sbjct: 255 SPLVRSLNDMLSRLSLSIQTQKRFIADAAHQMKTPLAGMRMQSELALRQTSQHDIHRSLE 314 Query: 334 QLAKSSETATRLVNQLLSLARAENQTPATAPFEPIELSELARSVVQDWVPMSFTQRIDLG 393 QLAKSSE+ATRLVNQLLSLARAENQ+ +APF ++LSE AR+VVQDWV SF QRID G Sbjct: 315 QLAKSSESATRLVNQLLSLARAENQSQESAPFVEVDLSEFARAVVQDWVEASFGQRIDFG 374 Query: 394 FEQPDHPILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRARTDEG----GGLAILE 449 FEQ + P+ + NP+MLRELL NL+DNALHYTP + GRVTVR R + G+AILE Sbjct: 375 FEQAEQPVPVLCNPLMLRELLGNLIDNALHYTPVE--GRVTVRVRGERAENSTAGIAILE 432 Query: 450 VEDNGPGIPVAERTNVFERFYRILGTPSTGSGLGLAIVREIAQQHEAIVEITHNPRSSDP 509 VED GPGIP AER +VF+RFYRIL + GSGLGLAIVREIAQQH+A V I++NPRSS+P Sbjct: 433 VEDTGPGIPPAERDHVFQRFYRILDSGRGGSGLGLAIVREIAQQHDAQVTISYNPRSSEP 492 Query: 510 KYPGSLFRVSFRMMPR 525 + PGSLFRV+FR++ + Sbjct: 493 ELPGSLFRVAFRLLEK 508 >ref|ZP_08273334.1| putative two-component sensor kinase transcriptional regulatory protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33206.1| putative two-component sensor kinase transcriptional regulatory protein [Oxalobacteraceae bacterium IMCC9480] Length = 509 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 346/492 (70%), Positives = 407/492 (82%), Gaps = 7/492 (1%) Query: 45 ERIQRSLFGEILDWMLAPLLLLWPMSIAITYLIAQSIANQPFDRALEDSVTVLAQQVSEV 104 E I+RSLFGEILDWML PLLLLWPMSIAITYL+A+SIANQPFDRAL+DSVTVL+QQV EV Sbjct: 20 EPIRRSLFGEILDWMLVPLLLLWPMSIAITYLVAKSIANQPFDRALDDSVTVLSQQVREV 79 Query: 105 NGKVVARLPVSARDLLRADDIDNIYYKVTGPNGEYVEGDVDMPQPPADEDRITLGTVQFR 164 +GKVVA LP +ARD+LRAD++D +YY+V +G YV+GD DM P A+E+ TVQFR Sbjct: 80 DGKVVALLPGAARDILRADEVDTVYYQVRDVDGIYVDGDHDMSMP-AEEENAPTSTVQFR 138 Query: 165 NDILHGSDVRIATLQVDLRRSAAQRAAQR----EPRIATVQVGETLEKRAQLANEIIKGV 220 ++ +HG++VRIA +QVDLR S R EPR+A VQVGETL+KRA+LAN+IIKGV Sbjct: 139 DERIHGTEVRIAYVQVDLRSSRLMREQASDTVSEPRMALVQVGETLDKRARLANDIIKGV 198 Query: 221 ILPQFVILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPIDSGQVPEEISPLVRSL 280 ILPQF+ILPVALALVWFAL+RGL+PL+ELQQRIRARRPDDLSPIDSGQVPEEISPLVRSL Sbjct: 199 ILPQFIILPVALALVWFALARGLAPLAELQQRIRARRPDDLSPIDSGQVPEEISPLVRSL 258 Query: 281 NDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELALRQDDQDDVRRSLEQLAKSSE 340 NDML RLSQTI +QKRFIADAAHQMKTPLAGMRMQSELALRQ QD++ RSLEQL+KSSE Sbjct: 259 NDMLERLSQTIDLQKRFIADAAHQMKTPLAGMRMQSELALRQTSQDEIHRSLEQLSKSSE 318 Query: 341 TATRLVNQLLSLARAENQTPATAPFEPIELSELARSVVQDWVPMSFTQRIDLGFEQPDHP 400 ATRL+NQLLSLA AEN++ FEPIEL ELAR+VVQDWVP + ++ID+GFEQP HP Sbjct: 319 AATRLINQLLSLAHAENRSVRARAFEPIELCELARTVVQDWVPAALARQIDIGFEQPGHP 378 Query: 401 ILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRARTDEGGGLAILEVEDNGPGIPVA 460 ++ GN ++LRELLSNL+DNAL YTP G+ VT+R RTDE A+LE+ED GPGI A Sbjct: 379 VMTVGNAMLLRELLSNLIDNALRYTPSLGS--VTIRVRTDENRQQAMLEIEDTGPGIAAA 436 Query: 461 ERTNVFERFYRILGTPSTGSGLGLAIVREIAQQHEAIVEITHNPRSSDPKYPGSLFRVSF 520 ER+++FERFYRILG+ GSGLGLAIVREIA QH+A +++ NP S DPK PGSLFRV+ Sbjct: 437 ERSHIFERFYRILGSNVEGSGLGLAIVREIALQHDAEIDVFSNPHSHDPKIPGSLFRVTL 496 Query: 521 RMMPRTPFFDDI 532 M F +DI Sbjct: 497 PMAHALSFIEDI 508 >ref|YP_001354554.1| sensor histidine kinase transcription regulator protein [Janthinobacterium sp. Marseille] gb|ABR91339.1| sensor histidine kinase transcription regulator protein [Janthinobacterium sp. Marseille] Length = 544 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 325/491 (66%), Positives = 389/491 (79%), Gaps = 3/491 (0%) Query: 40 ATQPVERIQRSLFGEILDWMLAPLLLLWPMSIAITYLIAQSIANQPFDRALEDSVTVLAQ 99 ATQP ER QRSLFGEILDWML PLLLLWP+SIAITYL+A+SIAN+PFDRALED VTV+AQ Sbjct: 54 ATQPEERTQRSLFGEILDWMLVPLLLLWPLSIAITYLVAKSIANEPFDRALEDKVTVVAQ 113 Query: 100 QVSEVNGKVVARLPVSARDLLRADDIDNIYYKVTGPNGEYVEGDVDMPQPPADEDRITLG 159 QV EVNGKVV RL +A D+L ADDIDN+YY+V G+ VEGD+++P P D + Sbjct: 114 QVKEVNGKVVTRLTGAATDILHADDIDNVYYQVRNSFGDVVEGDMEIPLP-KDVEAPPPW 172 Query: 160 TVQFRNDILHGSDVRIATLQVDLRRSAAQRAAQREPRIATVQVGETLEKRAQLANEIIKG 219 + QFR D + ++VRIA + VDL ++ EPR+A VQV ETL+KR+QL N+IIKG Sbjct: 173 STQFRYDFIRNTEVRIAYIYVDLHKTQTAPQLSIEPRLALVQVAETLDKRSQLVNQIIKG 232 Query: 220 VILPQFVILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPIDSGQVPEEISPLVRS 279 VI+P+F+ILP+AL LVWFAL+RGL PL ELQQRIR RRPDDLSPIDSG VPEEI PLV S Sbjct: 233 VIVPEFIILPIALVLVWFALTRGLRPLVELQQRIRERRPDDLSPIDSGYVPEEILPLVGS 292 Query: 280 LNDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELALRQDDQDDVRRSLEQLAKSS 339 LN+ML RLSQ+I +QKRFIADAAHQMKTPLAGMRMQSELALRQ DQ ++ +SLEQLAKSS Sbjct: 293 LNEMLERLSQSIKVQKRFIADAAHQMKTPLAGMRMQSELALRQTDQVEIHKSLEQLAKSS 352 Query: 340 ETATRLVNQLLSLARAENQTPATAPFEPIELSELARSVVQDWVPMSFTQRIDLGFEQPDH 399 ++ATR++NQLL+LARAENQTP T P +P+ELSELAR VQ+WV SF ++IDLGFEQPD+ Sbjct: 353 KSATRMINQLLALARAENQTPTTRPLQPLELSELARDTVQEWVQTSFNKKIDLGFEQPDY 412 Query: 400 PILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRARTDEGGGLAILEVEDNGPGIPV 459 I++ G+ +MLRELL+NL+DNAL+YTP G TVR R DE LA LEVED GPGI Sbjct: 413 HIMVNGDAIMLRELLNNLIDNALNYTP--AGGHATVRVRADEEARLAYLEVEDTGPGIAP 470 Query: 460 AERTNVFERFYRILGTPSTGSGLGLAIVREIAQQHEAIVEITHNPRSSDPKYPGSLFRVS 519 E +FERFYRILG+ GSGLGLAIVREIAQQH A ++I +NP ++PK PG L R++ Sbjct: 471 HEHKRIFERFYRILGSNVEGSGLGLAIVREIAQQHGAEIDILNNPNCTNPKAPGCLMRIT 530 Query: 520 FRMMPRTPFFD 530 + PFFD Sbjct: 531 LPLEQPAPFFD 541 >ref|YP_001100874.1| putative two-component sensor kinase transcriptional regulatory protein [Herminiimonas arsenicoxydans] emb|CAL62753.1| Putative two-component sensor kinase [Herminiimonas arsenicoxydans] Length = 512 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 332/514 (64%), Positives = 393/514 (76%), Gaps = 4/514 (0%) Query: 20 PESTAAPAAPTPRKKRRAALATQPVERIQRSLFGEILDWMLAPLLLLWPMSIAITYLIAQ 79 P++ A T Q ER QRSLFGEILDWML PLLLLWP+SIAITYL+A+ Sbjct: 2 PDTHRLNAPDTDATASNTGTTAQHEERTQRSLFGEILDWMLVPLLLLWPLSIAITYLVAK 61 Query: 80 SIANQPFDRALEDSVTVLAQQVSEVNGKVVARLPVSARDLLRADDIDNIYYKVTGPNGEY 139 SIAN+PFDRALED VTV+AQQV EVNG+VV RL A D+L ADDIDNIYY++ + + Sbjct: 62 SIANEPFDRALEDKVTVVAQQVKEVNGQVVTRLTGPAIDILHADDIDNIYYQIRDAHDTF 121 Query: 140 VEGDVDMPQPPADEDRITLGTVQFRNDILHGSDVRIATLQVDLRRSAAQRAAQREPRIAT 199 VEGD +MP P E+ T +FR D +H ++VRIA + VDL ++ + EPR+A Sbjct: 122 VEGDPEMPLPKDAEESAPWST-KFRYDFIHNTEVRIAYIYVDLHKTQVEPQLSIEPRMAL 180 Query: 200 VQVGETLEKRAQLANEIIKGVILPQFVILPVALALVWFALSRGLSPLSELQQRIRARRPD 259 VQVGETL+KR+QL N+IIKGVI+P+F+ILP+AL LVWFAL+RGL PL+ELQQRIRARRPD Sbjct: 181 VQVGETLDKRSQLVNQIIKGVIVPEFIILPIALILVWFALTRGLRPLAELQQRIRARRPD 240 Query: 260 DLSPIDSGQVPEEISPLVRSLNDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELA 319 DLSPIDSG VPEEI PLV SLNDML RLSQ+I +QKRFIADAAHQMKTPLAGMRMQSELA Sbjct: 241 DLSPIDSGHVPEEIIPLVGSLNDMLERLSQSIKVQKRFIADAAHQMKTPLAGMRMQSELA 300 Query: 320 LRQDDQDDVRRSLEQLAKSSETATRLVNQLLSLARAENQTPATAPFEPIELSELARSVVQ 379 LRQ D ++ +SLEQLAKSS++ATR+VNQLL+LARAENQTP T P + +ELSELAR VQ Sbjct: 301 LRQTDHAEIHKSLEQLAKSSKSATRMVNQLLALARAENQTPQTKPMQVLELSELARDTVQ 360 Query: 380 DWVPMSFTQRIDLGFEQPDHPILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRART 439 +WV SF ++IDLGFEQPD ++ G+ ML ELL+NL+DNAL YTP GN TVR RT Sbjct: 361 NWVQTSFNRKIDLGFEQPDEAVMARGDATMLHELLNNLIDNALSYTPAGGNA--TVRVRT 418 Query: 440 DEGGGLAILEVEDNGPGIPVAERTNVFERFYRILGTPSTGSGLGLAIVREIAQQHEAIVE 499 D+ GLA LEVEDNGPGI ER+++FERFYRILG+ GSGLGLAIVREIA QH A +E Sbjct: 419 DQQAGLAFLEVEDNGPGIAPHERSHIFERFYRILGSNVEGSGLGLAIVREIALQHNAEIE 478 Query: 500 ITHNPRSSDPKYPGSLFRVSFRMMP-RTPFFDDI 532 I +NPR K PG L RV R+ P TP+ D I Sbjct: 479 ILNNPRCQGQKRPGCLMRVILRLEPAETPWDDSI 512