BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0727.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAM32651.1| Sugar kinase ribokinase family protein [Herbaspi... 598 e-169 ref|YP_003773818.1| sugar kinase ribokinase family protein [Herb... 594 e-168 ref|YP_001354665.1| sugar kinase [Janthinobacterium sp. Marseill... 490 e-136 ref|YP_001101004.1| adenosine kinase [Herminiimonas arsenicoxyda... 488 e-136 ref|YP_004751431.1| sugar kinase, ribokinase family [Collimonas ... 484 e-135 >emb|CAM32651.1| Sugar kinase ribokinase family protein [Herbaspirillum seropedicae] Length = 359 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 292/323 (90%), Positives = 301/323 (93%), Gaps = 1/323 (0%) Query: 1 MRHHSLTCPDHAMSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGG 60 MRH SL MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGG Sbjct: 38 MRHQSLLA-SIPMSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGG 96 Query: 61 CAGNIAYNLKLLGGEPIVMATVGLDSAPYMERFAALDISTRCVRQIESSFTAQCFITTDA 120 CAGNIAYNLKLLGG+P++MATVGLDSAPY+ERFA L ISTRCVRQI+SSFTAQCFITTDA Sbjct: 97 CAGNIAYNLKLLGGDPVIMATVGLDSAPYLERFAELGISTRCVRQIDSSFTAQCFITTDA 156 Query: 121 DSNQITAFHPGAMTWSHENKVADAGAVKFAIVAPDGRDGMLQHAQQAAELKIPLIFDPGQ 180 DSNQITAFHPGAMTWSHENKVADAG VKFAIVAPDGRDGMLQHAQQAAEL IPLIFDPGQ Sbjct: 157 DSNQITAFHPGAMTWSHENKVADAGPVKFAIVAPDGRDGMLQHAQQAAELNIPLIFDPGQ 216 Query: 181 GMPMFDGNDLKNFIDLATYVAVNDYEAELLTARTGLSLAQIAERVTALVVTRGELGADIF 240 GMPMFDG DLKNFIDLATYVAVNDYEAELLTARTGLSLAQIAER AL+VTRGELGADIF Sbjct: 217 GMPMFDGEDLKNFIDLATYVAVNDYEAELLTARTGLSLAQIAERTKALIVTRGELGADIF 276 Query: 241 VDGKHHAIPCVKADKIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSIKIASQGP 300 GK IPCV AD+IADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGS+KIASQGP Sbjct: 277 EGGKKFDIPCVPADRIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSLKIASQGP 336 Query: 301 QNHAPSKAEIEERFHKAFGYRFG 323 QNHAPS+AEIEERFH AFGYRF Sbjct: 337 QNHAPSRAEIEERFHAAFGYRFA 359 >ref|YP_003773818.1| sugar kinase ribokinase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ61910.1| sugar kinase ribokinase family protein [Herbaspirillum seropedicae SmR1] Length = 311 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 287/311 (92%), Positives = 296/311 (95%) Query: 13 MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGGCAGNIAYNLKLL 72 MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGGCAGNIAYNLKLL Sbjct: 1 MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGGCAGNIAYNLKLL 60 Query: 73 GGEPIVMATVGLDSAPYMERFAALDISTRCVRQIESSFTAQCFITTDADSNQITAFHPGA 132 GG+P++MATVGLDSAPY+ERFA L ISTRCVRQI+SSFTAQCFITTDADSNQITAFHPGA Sbjct: 61 GGDPVIMATVGLDSAPYLERFAELGISTRCVRQIDSSFTAQCFITTDADSNQITAFHPGA 120 Query: 133 MTWSHENKVADAGAVKFAIVAPDGRDGMLQHAQQAAELKIPLIFDPGQGMPMFDGNDLKN 192 MTWSHENKVADAG VKFAIVAPDGRDGMLQHAQQAAEL IPLIFDPGQGMPMFDG DLKN Sbjct: 121 MTWSHENKVADAGPVKFAIVAPDGRDGMLQHAQQAAELNIPLIFDPGQGMPMFDGEDLKN 180 Query: 193 FIDLATYVAVNDYEAELLTARTGLSLAQIAERVTALVVTRGELGADIFVDGKHHAIPCVK 252 FIDLATYVAVNDYEAELLTARTGLSLAQIAER AL+VTRGELGADIF GK IPCV Sbjct: 181 FIDLATYVAVNDYEAELLTARTGLSLAQIAERTKALIVTRGELGADIFEGGKKFDIPCVP 240 Query: 253 ADKIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSIKIASQGPQNHAPSKAEIEE 312 AD+IADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGS+KIASQGPQNHAPS+AEIEE Sbjct: 241 ADRIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSLKIASQGPQNHAPSRAEIEE 300 Query: 313 RFHKAFGYRFG 323 RFH AFGYRF Sbjct: 301 RFHAAFGYRFA 311 >ref|YP_001354665.1| sugar kinase [Janthinobacterium sp. Marseille] gb|ABR89409.1| sugar kinase [Janthinobacterium sp. Marseille] Length = 310 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 231/310 (74%), Positives = 266/310 (85%) Query: 13 MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGGCAGNIAYNLKLL 72 M SLICGS+A+D IM +EGRFAEALLA+QLHK+NVSFLVPT+RREFGGCAGNIAYNLK+L Sbjct: 1 MKSLICGSVAFDTIMSFEGRFAEALLAEQLHKINVSFLVPTIRREFGGCAGNIAYNLKML 60 Query: 73 GGEPIVMATVGLDSAPYMERFAALDISTRCVRQIESSFTAQCFITTDADSNQITAFHPGA 132 GG+P++MAT+G D A Y ER L IS +C++ I+ S+T Q FITTDA NQI AFHPGA Sbjct: 61 GGDPLIMATIGQDGASYRERLEQLQISQQCLKTIDDSYTGQAFITTDAGGNQINAFHPGA 120 Query: 133 MTWSHENKVADAGAVKFAIVAPDGRDGMLQHAQQAAELKIPLIFDPGQGMPMFDGNDLKN 192 M++SH NKVADAG V AIVAPDGRDGMLQHAQ A+L IPLIFDPGQG+PMF+G++LKN Sbjct: 121 MSFSHHNKVADAGKVAIAIVAPDGRDGMLQHAQHCADLDIPLIFDPGQGLPMFNGDELKN 180 Query: 193 FIDLATYVAVNDYEAELLTARTGLSLAQIAERVTALVVTRGELGADIFVDGKHHAIPCVK 252 FI+LATYVAVNDYEAELLT RTGLSL QIAERV+ALVVTRGE GA+IF +H IPCVK Sbjct: 181 FIELATYVAVNDYEAELLTERTGLSLKQIAERVSALVVTRGEQGAEIFTGSEHLNIPCVK 240 Query: 253 ADKIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSIKIASQGPQNHAPSKAEIEE 312 A+++ DPTGCGDAFRAGMLFGLT DW TTGRL+SLMGSIKIA QGPQNH S+AEI++ Sbjct: 241 AEQVLDPTGCGDAFRAGMLFGLTNNMDWATTGRLSSLMGSIKIAHQGPQNHVLSRAEIDD 300 Query: 313 RFHKAFGYRF 322 RF +AFGYR Sbjct: 301 RFEQAFGYRL 310 >ref|YP_001101004.1| adenosine kinase [Herminiimonas arsenicoxydans] emb|CAL62883.1| Carbohydrate kinase [Herminiimonas arsenicoxydans] Length = 310 Score = 488 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 227/310 (73%), Positives = 261/310 (84%) Query: 13 MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGGCAGNIAYNLKLL 72 M SLICGSLA+D IM ++ RF+EALLADQLH++NV F VP MRREFGGCAGNIAYNLKLL Sbjct: 1 MKSLICGSLAFDTIMSFQSRFSEALLADQLHRINVCFFVPEMRREFGGCAGNIAYNLKLL 60 Query: 73 GGEPIVMATVGLDSAPYMERFAALDISTRCVRQIESSFTAQCFITTDADSNQITAFHPGA 132 GG+P++MAT+G D A Y +R IS +C++ IE+S+TAQ FITTD DSNQITAFHPGA Sbjct: 61 GGDPLIMATIGQDGANYRDRLQKQQISQQCIKTIETSYTAQAFITTDTDSNQITAFHPGA 120 Query: 133 MTWSHENKVADAGAVKFAIVAPDGRDGMLQHAQQAAELKIPLIFDPGQGMPMFDGNDLKN 192 M ++HEN V DAG V AI+APDGRDGMLQHAQQ A+L +P IFDPGQG+PMF+G +LK Sbjct: 121 MIFAHENTVTDAGPVAIAIIAPDGRDGMLQHAQQCADLNVPFIFDPGQGLPMFNGEELKA 180 Query: 193 FIDLATYVAVNDYEAELLTARTGLSLAQIAERVTALVVTRGELGADIFVDGKHHAIPCVK 252 FIDLATYVAVN+YEAELLT RTGLSLAQIAERV+ALVVTRG+ GA+IF + + AIPCVK Sbjct: 181 FIDLATYVAVNEYEAELLTERTGLSLAQIAERVSALVVTRGDEGAEIFTNNERLAIPCVK 240 Query: 253 ADKIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSIKIASQGPQNHAPSKAEIEE 312 DK+ DPTGCGDAFRAGMLFGLT DW TTGRLASLMGSIKI QGPQNH S+AEI+E Sbjct: 241 VDKVVDPTGCGDAFRAGMLFGLTNNLDWPTTGRLASLMGSIKITHQGPQNHVLSRAEIDE 300 Query: 313 RFHKAFGYRF 322 RFH+AFGY Sbjct: 301 RFHQAFGYHL 310 >ref|YP_004751431.1| sugar kinase, ribokinase family [Collimonas fungivorans Ter331] gb|AEK60608.1| Sugar kinase, ribokinase family [Collimonas fungivorans Ter331] Length = 325 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 231/310 (74%), Positives = 266/310 (85%) Query: 13 MSSLICGSLAYDNIMQYEGRFAEALLADQLHKVNVSFLVPTMRREFGGCAGNIAYNLKLL 72 M+SLICGSLA+D IMQY GRF++ALLADQLHK++VSFLVPT+RR+FGGCAGNIAYNLKLL Sbjct: 16 MTSLICGSLAFDVIMQYPGRFSDALLADQLHKISVSFLVPTLRRDFGGCAGNIAYNLKLL 75 Query: 73 GGEPIVMATVGLDSAPYMERFAALDISTRCVRQIESSFTAQCFITTDADSNQITAFHPGA 132 GG+P +MAT+G D Y+ R IS + VR I+S +TAQCF+TTDAD+NQI AFHPGA Sbjct: 76 GGDPQIMATIGHDGGDYLARLDQQGISRKTVRTIDSIYTAQCFVTTDADNNQINAFHPGA 135 Query: 133 MTWSHENKVADAGAVKFAIVAPDGRDGMLQHAQQAAELKIPLIFDPGQGMPMFDGNDLKN 192 MT SHENKVADAG VK AIVAPDGRDGMLQHA A IPLIFDPGQGMPMF+G++LK Sbjct: 136 MTHSHENKVADAGPVKLAIVAPDGRDGMLQHAADCAAQGIPLIFDPGQGMPMFNGDELKQ 195 Query: 193 FIDLATYVAVNDYEAELLTARTGLSLAQIAERVTALVVTRGELGADIFVDGKHHAIPCVK 252 FI+LATY+A+NDYEAE+L +RTGLSLAQIAERV+ALVVTRGELGA+IF G IPCVK Sbjct: 196 FIELATYIAMNDYEAEMLASRTGLSLAQIAERVSALVVTRGELGAEIFTAGGKIDIPCVK 255 Query: 253 ADKIADPTGCGDAFRAGMLFGLTEGYDWETTGRLASLMGSIKIASQGPQNHAPSKAEIEE 312 AD++ DPTGCGDAFRAGML+GL+ G DW TTGRL+SL+GSIKIA GPQNHAPS+AEI E Sbjct: 256 ADQVLDPTGCGDAFRAGMLYGLSNGMDWATTGRLSSLLGSIKIAHLGPQNHAPSRAEINE 315 Query: 313 RFHKAFGYRF 322 RFH+ FGYR Sbjct: 316 RFHREFGYRL 325