BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0722.p         (145 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773823.1| 3-dehydroquinate dehydratase [Herbaspirillum...   236   6e-61
ref|YP_001100999.1| 3-dehydroquinate dehydratase [Herminiimonas ...   214   3e-54
ref|YP_004686919.1| 3-dehydroquinate dehydratase AroQ [Cupriavid...   191   2e-47
ref|YP_727613.1| 3-dehydroquinate dehydratase [Ralstonia eutroph...   190   7e-47
ref|YP_002006637.1| 3-dehydroquinate dehydratase [Cupriavidus ta...   189   1e-46

>ref|YP_003773823.1| 3-dehydroquinate dehydratase [Herbaspirillum seropedicae SmR1]
 gb|ADJ61915.1| 3-dehydroquinate dehydratase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 145

 Score =  236 bits (603), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 137/145 (94%), Positives = 140/145 (96%)

Query: 1   MAKQLLLLNGPNLNLLGTREPEVYGSTTLADIEQRAQEQACAAGASLVAFQSNHEGALID 60
           MAKQLLLLNGPNLNLLGTREP VYGSTTLADIEQRAQEQA AAGASLVAFQSNHEGALID
Sbjct: 1   MAKQLLLLNGPNLNLLGTREPAVYGSTTLADIEQRAQEQARAAGASLVAFQSNHEGALID 60

Query: 61  RIHQARHEGVDGIIINPGGLTHTSVALRDALAGVAIPFVELHISNVHQREEFRHFSYLSG 120
           RIHQAR EGVDGIIINPGGLTHTSVALRDALAGVAIPFVE+HISN+HQREEFRHFSYLSG
Sbjct: 61  RIHQARSEGVDGIIINPGGLTHTSVALRDALAGVAIPFVEVHISNIHQREEFRHFSYLSG 120

Query: 121 IARAVLCGFGVDGYMLAVDFWLRQS 145
           IARAVLCGFGVDGY +AVD WLRQS
Sbjct: 121 IARAVLCGFGVDGYRMAVDHWLRQS 145


>ref|YP_001100999.1| 3-dehydroquinate dehydratase [Herminiimonas arsenicoxydans]
 sp|A4G8P1|AROQ_HERAR RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
           AltName: Full=Type II DHQase
 emb|CAL62878.1| 3-dehydroquinate dehydratase (3-dehydroquinase) (Type II DHQase)
           [Herminiimonas arsenicoxydans]
          Length = 145

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 104/144 (72%), Positives = 121/144 (84%)

Query: 1   MAKQLLLLNGPNLNLLGTREPEVYGSTTLADIEQRAQEQACAAGASLVAFQSNHEGALID 60
           MAK +LLLNGPNLN+LG+REPEVYGS TLAD+E+ A EQA  AGA L AFQSNHEG LID
Sbjct: 1   MAKNILLLNGPNLNMLGSREPEVYGSATLADVERAATEQASQAGAKLTAFQSNHEGVLID 60

Query: 61  RIHQARHEGVDGIIINPGGLTHTSVALRDALAGVAIPFVELHISNVHQREEFRHFSYLSG 120
           RI  A+ EGVD IIINPGGLTH+SV+LRDALA VA+PFVE+H+SN+HQRE FRH SYLSG
Sbjct: 61  RIQAAKKEGVDAIIINPGGLTHSSVSLRDALASVALPFVEVHVSNIHQREAFRHHSYLSG 120

Query: 121 IARAVLCGFGVDGYMLAVDFWLRQ 144
           IA  V+CG G+DGY  A+ F L++
Sbjct: 121 IAVGVICGLGIDGYTAAISFALKK 144


>ref|YP_004686919.1| 3-dehydroquinate dehydratase AroQ [Cupriavidus necator N-1]
 gb|AEI78438.1| 3-dehydroquinate dehydratase AroQ [Cupriavidus necator N-1]
          Length = 165

 Score =  191 bits (486), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 97/142 (68%), Positives = 114/142 (80%)

Query: 3   KQLLLLNGPNLNLLGTREPEVYGSTTLADIEQRAQEQACAAGASLVAFQSNHEGALIDRI 62
           +++L+L+GPNLNLLGTREPE YG TTLADI+    E+A  AG SL  FQSNHEGAL+DRI
Sbjct: 14  RKVLVLHGPNLNLLGTREPETYGYTTLADIDAALAERAAKAGVSLDTFQSNHEGALVDRI 73

Query: 63  HQARHEGVDGIIINPGGLTHTSVALRDALAGVAIPFVELHISNVHQREEFRHFSYLSGIA 122
           H AR EGV+ IIINP   THTSVALRDALAGVAIPFVE+H+SNVH+RE FRH SY S +A
Sbjct: 74  HAARAEGVEFIIINPAAYTHTSVALRDALAGVAIPFVEVHLSNVHRRESFRHHSYFSDVA 133

Query: 123 RAVLCGFGVDGYMLAVDFWLRQ 144
             V+CG G  GY+LA+D+ L Q
Sbjct: 134 VGVICGLGWQGYLLALDYVLDQ 155


>ref|YP_727613.1| 3-dehydroquinate dehydratase [Ralstonia eutropha H16]
 emb|CAJ94245.1| 3-Dehydroquinate dehydratase [Ralstonia eutropha H16]
          Length = 165

 Score =  190 bits (482), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 97/142 (68%), Positives = 114/142 (80%)

Query: 3   KQLLLLNGPNLNLLGTREPEVYGSTTLADIEQRAQEQACAAGASLVAFQSNHEGALIDRI 62
           +++L+L+GPNLNLLGTREPE YG TTLADI+    E+A  AG SL  FQSNHEGAL+DRI
Sbjct: 14  RKVLVLHGPNLNLLGTREPETYGHTTLADIDAALAERAAKAGVSLDTFQSNHEGALVDRI 73

Query: 63  HQARHEGVDGIIINPGGLTHTSVALRDALAGVAIPFVELHISNVHQREEFRHFSYLSGIA 122
           H AR EGV+ IIINP   THTSVALRDALAGVAIPFVE+H+SNVH+RE FRH SY S +A
Sbjct: 74  HAARAEGVEFIIINPAAYTHTSVALRDALAGVAIPFVEVHLSNVHRRESFRHHSYFSDVA 133

Query: 123 RAVLCGFGVDGYMLAVDFWLRQ 144
             V+CG G  GY+LA+D+ L Q
Sbjct: 134 VGVICGLGWQGYLLALDYVLGQ 155


>ref|YP_002006637.1| 3-dehydroquinate dehydratase [Cupriavidus taiwanensis LMG 19424]
 emb|CAQ70576.1| 3-DEHYDROQUINATE DEHYDRATASE (3-DEHYDROQUINASE) (TYPE II DHQASE)
           PROTEIN [Cupriavidus taiwanensis LMG 19424]
          Length = 165

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/142 (66%), Positives = 114/142 (80%)

Query: 3   KQLLLLNGPNLNLLGTREPEVYGSTTLADIEQRAQEQACAAGASLVAFQSNHEGALIDRI 62
           +++L+L+GPNLNLLGTREPE YG TTLADI+    E+A  AG SL  FQSNHEGAL+DR+
Sbjct: 14  RKVLVLHGPNLNLLGTREPETYGHTTLADIDAALAERAAKAGMSLQTFQSNHEGALVDRV 73

Query: 63  HQARHEGVDGIIINPGGLTHTSVALRDALAGVAIPFVELHISNVHQREEFRHFSYLSGIA 122
           H AR EG++ IIINP   THTSVALRDALAGVAIPFVE+H+SNVH+RE FRH SY S +A
Sbjct: 74  HAARAEGIEFIIINPAAYTHTSVALRDALAGVAIPFVEVHLSNVHRRESFRHHSYFSDVA 133

Query: 123 RAVLCGFGVDGYMLAVDFWLRQ 144
             V+CG G  GY+LA+D+ L Q
Sbjct: 134 VGVVCGLGWQGYLLALDYVLGQ 155