BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0720.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773824.1| thioredoxin-related transmembrane protein [H... 291 2e-77 ref|YP_004751437.1| C-type cytochrome biogenesis protein ResA (t... 231 3e-59 ref|YP_001100998.1| thioredoxin-related transmembrane protein [H... 214 5e-54 ref|YP_001354659.1| thioredoxin-related transmembrane protein [J... 203 6e-51 ref|NP_520905.1| thioredoxin-related transmembrane protein [Rals... 165 2e-39 >ref|YP_003773824.1| thioredoxin-related transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61916.1| thioredoxin-related transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 173 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 154/173 (89%), Positives = 166/173 (95%) Query: 1 MTKLKNVILLAVVAVVCVGVGVYASHRANPPASPETQALNKLLSQSMPDASGQTQSLAQY 60 M KL+NVILLAVVAVVCVG+G+YASHRA+P S ETQALN+LL+QS+PDA+GQ QSLAQY Sbjct: 1 MKKLRNVILLAVVAVVCVGIGLYASHRAHPAESAETQALNRLLAQSLPDATGQMQSLAQY 60 Query: 61 KGKPLVVNFWATWCGPCVEEMPELTALQQEIAPVQILGIGVDSQENIAKFAQKYQIRYPL 120 +GKPL+VNFWATWCGPCVEEMPELTALQQEIAPVQILGIGVDSQENI KFAQKYQIRYPL Sbjct: 61 RGKPLIVNFWATWCGPCVEEMPELTALQQEIAPVQILGIGVDSQENIGKFAQKYQIRYPL 120 Query: 121 FVAGTGATDLLRQFGNQAGGLPFTALVGKDGNVKKVYLGRIKFDELRADLSQL 173 FVAGTGATDLLRQFGNQAGGLPFTALVGKDGNVKK+YLGR+KFDELR DLSQL Sbjct: 121 FVAGTGATDLLRQFGNQAGGLPFTALVGKDGNVKKIYLGRLKFDELRQDLSQL 173 >ref|YP_004751437.1| C-type cytochrome biogenesis protein ResA (thioredoxin) [Collimonas fungivorans Ter331] gb|AEK60614.1| C-type cytochrome biogenesis protein ResA (thioredoxin) [Collimonas fungivorans Ter331] Length = 174 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 108/171 (63%), Positives = 139/171 (81%), Gaps = 2/171 (1%) Query: 5 KNVILLAVVAVVCVGVGVYASHRANPPASPETQALNKLLSQSMPDASGQTQSLAQYKGKP 64 +N+++ +A++ +GVY + + PA+PE+ A+ LL+Q MPDASG+ +L+Q+KGKP Sbjct: 4 RNILIFVPIAILFCAIGVYFGMQRHTPAAPESVAVAALLAQEMPDASGKASALSQWKGKP 63 Query: 65 LVVNFWATWCGPCVEEMPELTALQQEIAP--VQILGIGVDSQENIAKFAQKYQIRYPLFV 122 LVVNFWATWC PCVEEMPEL ALQ EIA +Q++GIG+DS +NIAKFA KY+I YPL++ Sbjct: 64 LVVNFWATWCAPCVEEMPELNALQTEIAAKNIQVVGIGIDSADNIAKFADKYKISYPLYL 123 Query: 123 AGTGATDLLRQFGNQAGGLPFTALVGKDGNVKKVYLGRIKFDELRADLSQL 173 AGTGAT LLRQFGNQ+GGLPFT L+G+DG VKK+YLG IKFDELR DL+ L Sbjct: 124 AGTGATALLRQFGNQSGGLPFTVLIGRDGAVKKMYLGSIKFDELRKDLALL 174 >ref|YP_001100998.1| thioredoxin-related transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL62877.1| Putative thioredoxin [Herminiimonas arsenicoxydans] Length = 173 Score = 214 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 94/171 (54%), Positives = 132/171 (77%), Gaps = 2/171 (1%) Query: 5 KNVILLAVVAVVCVGVGVYASHRANPPASPETQALNKLLSQSMPDASGQTQSLAQYKGKP 64 +NV + + A+V G+G+Y +R + PA+PE+ A+ +Q + DA G+T +L+Q++GK Sbjct: 3 RNVFVFGIFALVFAGIGIYFGNRHHTPAAPESPAVATFFAQQLEDADGKTHALSQWQGKT 62 Query: 65 LVVNFWATWCGPCVEEMPELTALQQEIAP--VQILGIGVDSQENIAKFAQKYQIRYPLFV 122 L+VNFWATWC PCVEEMPELTALQ E+AP +QILG+G+D+ NI +FA KY+I YPL++ Sbjct: 63 LIVNFWATWCAPCVEEMPELTALQTELAPQGIQILGLGIDNPSNIREFAAKYKISYPLYI 122 Query: 123 AGTGATDLLRQFGNQAGGLPFTALVGKDGNVKKVYLGRIKFDELRADLSQL 173 AG T+L RQFGNQAGGLPFT ++G +G++KK YLGR+K ++LRAD+ L Sbjct: 123 AGMTGTELSRQFGNQAGGLPFTVIIGPNGDIKKTYLGRLKMEQLRADIHSL 173 >ref|YP_001354659.1| thioredoxin-related transmembrane protein [Janthinobacterium sp. Marseille] gb|ABR91198.1| thioredoxin-related transmembrane protein [Janthinobacterium sp. Marseille] Length = 173 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 90/171 (52%), Positives = 127/171 (74%), Gaps = 2/171 (1%) Query: 5 KNVILLAVVAVVCVGVGVYASHRANPPASPETQALNKLLSQSMPDASGQTQSLAQYKGKP 64 +NV+L +AV +G+Y + + PA+PE+ A+ +Q M D++G+ +L +++GK Sbjct: 3 RNVLLFGAIAVFFAAIGIYFGDKHHSPAAPESPAVATFFAQQMEDSAGKMHTLGEWQGKT 62 Query: 65 LVVNFWATWCGPCVEEMPELTALQQEIA--PVQILGIGVDSQENIAKFAQKYQIRYPLFV 122 L+VNFWATWC PCVEEMPELT LQ E+A +QILG+G+DS NI +FA KY+I YPL++ Sbjct: 63 LIVNFWATWCAPCVEEMPELTELQTELAGKNIQILGVGIDSPSNIREFAAKYKITYPLYI 122 Query: 123 AGTGATDLLRQFGNQAGGLPFTALVGKDGNVKKVYLGRIKFDELRADLSQL 173 AG ++L RQFGNQAGGLPFT ++G G+V+K YLGR+K D+LRAD++ L Sbjct: 123 AGLTGSELSRQFGNQAGGLPFTVIIGPKGDVRKTYLGRLKMDQLRADIAAL 173 >ref|NP_520905.1| thioredoxin-related transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD16491.1| putative ipr012335 thioredoxin fold transmembrane protein [Ralstonia solanacearum GMI1000] Length = 174 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 1/173 (0%) Query: 1 MTKLKNVILLAVVAVVCVGVGVYASHRANPPASPETQALNKLLSQSMPDASGQTQSLAQY 60 M++ + +I L + +V +GVYA HRA P P A+ +PDA+G L+ + Sbjct: 1 MSRRQTLIALILAGIVAAVLGVYAGHRATQPRPPADGAVTAFFDARLPDANGTPIDLSAF 60 Query: 61 KGKPLVVNFWATWCGPCVEEMPELTALQQE-IAPVQILGIGVDSQENIAKFAQKYQIRYP 119 +G+P+V+NFWA WCGPCVEEMPEL+AL QE A V+ +GIG+DS NI F K + YP Sbjct: 61 RGQPVVINFWAPWCGPCVEEMPELSALAQEQKARVKFIGIGIDSAANIQAFLGKVPVTYP 120 Query: 120 LFVAGTGATDLLRQFGNQAGGLPFTALVGKDGNVKKVYLGRIKFDELRADLSQ 172 + VAG G T+L RQ GNQAGGLPFT ++ G + +GR+ DELRA L + Sbjct: 121 IAVAGFGGTELGRQLGNQAGGLPFTVILNAQGEITFRKMGRVHADELRAALQR 173