BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0706.p (413 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773840.1| tyrosyl-tRNA synthetase [Herbaspirillum sero... 799 0.0 ref|YP_001351992.1| tyrosyl-tRNA synthetase [Janthinobacterium s... 710 0.0 ref|YP_004754606.1| tyrosyl-tRNA synthetase [Collimonas fungivor... 708 0.0 ref|YP_001098606.1| tyrosyl-tRNA synthetase [Herminiimonas arsen... 706 0.0 ref|ZP_08275030.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bac... 691 0.0 >ref|YP_003773840.1| tyrosyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ61932.1| tyrosyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 453 Score = 799 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 403/416 (96%), Positives = 409/416 (98%), Gaps = 3/416 (0%) Query: 1 MNADQLTPQAP---LPLTDKVQEALAITKRGIDELLIESEFAQKLARAEKSGQPLRIKLG 57 MNADQ TP A +PL+DKV EALAITKRGIDELLIESEFAQKLARAE+SGQPLRIKLG Sbjct: 38 MNADQSTPTAAPSKMPLSDKVLEALAITKRGIDELLIESEFAQKLARAEQSGQPLRIKLG 97 Query: 58 LDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEI 117 LDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEI Sbjct: 98 LDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEI 157 Query: 118 NAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEG 177 NAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEG Sbjct: 158 NAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEG 217 Query: 178 TPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLE 237 TPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLE Sbjct: 218 TPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLE 277 Query: 238 GLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEIAGYKAEVE 297 GLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYY+LLSFRSMAEIAGYKAEV+ Sbjct: 278 GLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVD 337 Query: 298 AGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLSGAPLGIGQL 357 AGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSL+GAPLGIGQL Sbjct: 338 AGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLTGAPLGIGQL 397 Query: 358 LKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTLA 413 LKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTLA Sbjct: 398 LKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTLA 453 >ref|YP_001351992.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille] gb|ABR89088.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 413 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 351/413 (84%), Positives = 383/413 (92%) Query: 1 MNADQLTPQAPLPLTDKVQEALAITKRGIDELLIESEFAQKLARAEKSGQPLRIKLGLDP 60 M+ + LPL+DKVQEAL + KRG++ELLIESEFAQKLAR+E++G+PLRIKLGLDP Sbjct: 1 MDVSSSSKAVQLPLSDKVQEALTVAKRGVEELLIESEFAQKLARSEQTGKPLRIKLGLDP 60 Query: 61 TAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAK 120 TAPDLHLGHTVVLNKMRQLQ+LGHQVIFLIGDFTSMIGDPSGRN TRPPL++EQIE NAK Sbjct: 61 TAPDLHLGHTVVLNKMRQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQIEENAK 120 Query: 121 TYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPI 180 TYF+QASLVLDP +TEIRYNSEWCD LG+RGMI+L+++YTVAR++ER+DFTKRFK TPI Sbjct: 121 TYFSQASLVLDPERTEIRYNSEWCDPLGARGMIELSAKYTVARILEREDFTKRFKANTPI 180 Query: 181 SVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLD 240 S+HEFLYPLMQGYDSVAL+SDLELGGTDQKFNLLVGRELQK +GQE QCILTMPLLEGLD Sbjct: 181 SLHEFLYPLMQGYDSVALQSDLELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLD 240 Query: 241 GVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEIAGYKAEVEAGK 300 GVEKMSKSKGNYIGITEP NTMFAK+MSISDVMMWRYYELLSFRS++EIA +K EVE G+ Sbjct: 241 GVEKMSKSKGNYIGITEPGNTMFAKLMSISDVMMWRYYELLSFRSLSEIAQFKKEVEGGR 300 Query: 301 NPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLSGAPLGIGQLLKQ 360 NPRDIKV LAQEIVARFHS QA EDAL DFVNRSKGGIP DIPEV+LSGAPLGIGQLLKQ Sbjct: 301 NPRDIKVLLAQEIVARFHSVQAGEDALTDFVNRSKGGIPHDIPEVALSGAPLGIGQLLKQ 360 Query: 361 ANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTLA 413 ANLCASTSEALRMVEQGGVRIDG VISDKGLKVEAG VVQVGKRKFARVTLA Sbjct: 361 ANLCASTSEALRMVEQGGVRIDGAVISDKGLKVEAGTLVVQVGKRKFARVTLA 413 >ref|YP_004754606.1| tyrosyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK63783.1| Tyrosyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 423 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 346/402 (86%), Positives = 382/402 (95%) Query: 11 PLPLTDKVQEALAITKRGIDELLIESEFAQKLARAEKSGQPLRIKLGLDPTAPDLHLGHT 70 PL L+D+ QEALAITKRG+DELLIES+FA+KL R+E+SG+PLRIKLGLDPTAPDLHLGHT Sbjct: 20 PLVLSDRTQEALAITKRGVDELLIESDFARKLQRSEQSGKPLRIKLGLDPTAPDLHLGHT 79 Query: 71 VVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVL 130 VVLNKMRQLQ+LGH VIFLIGDFTSMIGDPSGRN TRPPL+REQIE NAKTYFAQASLVL Sbjct: 80 VVLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRNVTRPPLTREQIEENAKTYFAQASLVL 139 Query: 131 DPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLM 190 DP++TEIRYNSEW D LG+RGMIQL+++YTVAR++ER+DFTKR+K GTPISVHE LYPLM Sbjct: 140 DPARTEIRYNSEWSDQLGARGMIQLSAKYTVARILEREDFTKRYKAGTPISVHELLYPLM 199 Query: 191 QGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKG 250 QGYDSVAL+SDLELGGTDQKFNLLVGRELQKD+GQEPQCILTMPLLEGLDGVEKMSKSKG Sbjct: 200 QGYDSVALESDLELGGTDQKFNLLVGRELQKDYGQEPQCILTMPLLEGLDGVEKMSKSKG 259 Query: 251 NYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEIAGYKAEVEAGKNPRDIKVALA 310 NYIGITEP NTMFAK+MSISDVMMWRYYELLSF+S+A+IA YKA+VE G+NPRDIKVAL Sbjct: 260 NYIGITEPGNTMFAKIMSISDVMMWRYYELLSFKSLAQIAAYKAQVEGGQNPRDIKVALG 319 Query: 311 QEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLSGAPLGIGQLLKQANLCASTSEA 370 QEIVARFH+QQAAEDAL+DF NR+KGGIPDDIPE++LSGAPLGIGQLLKQANLC STSEA Sbjct: 320 QEIVARFHNQQAAEDALSDFNNRAKGGIPDDIPELTLSGAPLGIGQLLKQANLCPSTSEA 379 Query: 371 LRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTL 412 LRMVEQGGVRIDG V+SDKGLKV+A V+QVGKRKFARVTL Sbjct: 380 LRMVEQGGVRIDGAVVSDKGLKVDAATFVIQVGKRKFARVTL 421 >ref|YP_001098606.1| tyrosyl-tRNA synthetase [Herminiimonas arsenicoxydans] emb|CAL60477.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) [Herminiimonas arsenicoxydans] Length = 413 Score = 706 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 347/413 (84%), Positives = 383/413 (92%) Query: 1 MNADQLTPQAPLPLTDKVQEALAITKRGIDELLIESEFAQKLARAEKSGQPLRIKLGLDP 60 M+ + LPL+D VQEAL + KRG++ELLIESEFAQKLAR+E+SG+PLRIKLGLDP Sbjct: 1 MDVSSSSKATLLPLSDAVQEALTVAKRGVEELLIESEFAQKLARSEQSGKPLRIKLGLDP 60 Query: 61 TAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAK 120 TAPDLHLGHTVVLNKMRQLQ+LGHQVIFLIGDFTSMIGDPSGRN TRPPL++EQI NAK Sbjct: 61 TAPDLHLGHTVVLNKMRQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQISENAK 120 Query: 121 TYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPI 180 TYF+QASLVLDP++TEIRYNSEWCD LG+RGMI+L+++YTVAR++ER+DFTKRF+ TPI Sbjct: 121 TYFSQASLVLDPARTEIRYNSEWCDPLGARGMIELSAKYTVARILEREDFTKRFQSNTPI 180 Query: 181 SVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLD 240 S+HEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQK +GQE QCILTMPLLEGLD Sbjct: 181 SLHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLD 240 Query: 241 GVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEIAGYKAEVEAGK 300 GVEKMSKSKGNYIGITEP NTMFAK+MSISDVMMWRYYELLSFRS+AEI ++ +VE G+ Sbjct: 241 GVEKMSKSKGNYIGITEPGNTMFAKLMSISDVMMWRYYELLSFRSLAEITQFRKDVEGGR 300 Query: 301 NPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLSGAPLGIGQLLKQ 360 NPRD+KV LAQEIVARFHS QAAEDALADFVNRSKGGIPDDIPE++LSGAPLGIGQLLKQ Sbjct: 301 NPRDVKVLLAQEIVARFHSVQAAEDALADFVNRSKGGIPDDIPELALSGAPLGIGQLLKQ 360 Query: 361 ANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTLA 413 ANLCASTSEALRMVEQGGVRIDG VISDK LKVEAG VVQVGKRKFARVTL+ Sbjct: 361 ANLCASTSEALRMVEQGGVRIDGAVISDKALKVEAGTVVVQVGKRKFARVTLS 413 >ref|ZP_08275030.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31486.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 424 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 343/405 (84%), Positives = 371/405 (91%) Query: 9 QAPLPLTDKVQEALAITKRGIDELLIESEFAQKLARAEKSGQPLRIKLGLDPTAPDLHLG 68 Q L LT+ VQ ALAITKRG+DELLIESEFAQKLAR+E +G+PLRIKLGLDPTAPDLHLG Sbjct: 20 QPTLVLTESVQHALAITKRGVDELLIESEFAQKLARSELTGKPLRIKLGLDPTAPDLHLG 79 Query: 69 HTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASL 128 HTVVLNKMRQLQ+LGH VIFLIGDFTSMIGDPSGRN TRP L++EQIE NAKTYFAQASL Sbjct: 80 HTVVLNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNITRPALTKEQIEDNAKTYFAQASL 139 Query: 129 VLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYP 188 VLD +TEIRYNSEWCD LG+RGMIQL+S+YTVAR++ER+DFTKRFK GTPISVHE LYP Sbjct: 140 VLDAERTEIRYNSEWCDPLGARGMIQLSSKYTVARILEREDFTKRFKAGTPISVHELLYP 199 Query: 189 LMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKS 248 LMQGYDSVAL +DLELGGTDQKFNLLVGRELQKD+GQEPQCILTMPLLEGLDGVEKMSKS Sbjct: 200 LMQGYDSVALHADLELGGTDQKFNLLVGRELQKDWGQEPQCILTMPLLEGLDGVEKMSKS 259 Query: 249 KGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEIAGYKAEVEAGKNPRDIKVA 308 KGNYI ITEPAN+MFAKVMSISD MMWRYYELLS RS+AE+A +K +VE G+NPRDIKVA Sbjct: 260 KGNYISITEPANSMFAKVMSISDTMMWRYYELLSARSLAELAQFKTDVEGGRNPRDIKVA 319 Query: 309 LAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLSGAPLGIGQLLKQANLCASTS 368 LAQEIV RFH+QQA DALADF NR++GGIPDDIPEV L GAPLGIGQLLKQANLCASTS Sbjct: 320 LAQEIVTRFHNQQAGVDALADFDNRARGGIPDDIPEVQLGGAPLGIGQLLKQANLCASTS 379 Query: 369 EALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTLA 413 EALRMVEQ GVRIDG ISDK LKVEAG V+QVGKRKFARVTL+ Sbjct: 380 EALRMVEQNGVRIDGVAISDKALKVEAGTFVLQVGKRKFARVTLS 424