BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0705.p         (114 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773841.1| D-tyrosyl-tRNA(Tyr) deacylase [Herbaspirillu...   129   1e-28
ref|YP_001098607.1| D-tyrosyl-tRNA(Tyr) deacylase [Herminiimonas...   111   5e-23
ref|YP_001351993.1| D-tyrosyl-tRNA(Tyr) deacylase [Janthinobacte...   104   4e-21
ref|YP_002355552.1| D-tyrosyl-tRNA(Tyr) deacylase [Thauera sp. M...   102   1e-20
ref|ZP_08275031.1| D-tyrosyl-tRNA(Tyr) deacylase [Oxalobacterace...    97   1e-18

>ref|YP_003773841.1| D-tyrosyl-tRNA(Tyr) deacylase [Herbaspirillum seropedicae SmR1]
 gb|ADJ61933.1| D-tyrosyl-tRNA(Tyr) deacylase protein [Herbaspirillum seropedicae
          SmR1]
          Length = 157

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 74/99 (74%), Positives = 79/99 (79%), Gaps = 8/99 (8%)

Query: 1  MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
          MIALLQR SQASVVVDGQTLG+IGTGLMVLVCAER+D+ AEADALLKKLLAYRVF+DEAG
Sbjct: 1  MIALLQRVSQASVVVDGQTLGAIGTGLMVLVCAERNDSTAEADALLKKLLAYRVFADEAG 60

Query: 61 KMNRSVADVQGGLLL--------DRAGGRPPTVRPFCRP 91
          KMNRSVADVQGGLLL        D   G  P+  P   P
Sbjct: 61 KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAATP 99


>ref|YP_001098607.1| D-tyrosyl-tRNA(Tyr) deacylase [Herminiimonas arsenicoxydans]
 sp|A4G1U1|DTD_HERAR RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase
 emb|CAL60478.1| D-tyrosyl-tRNA(Tyr) deacylase [Herminiimonas arsenicoxydans]
          Length = 149

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 62/99 (62%), Positives = 72/99 (72%), Gaps = 8/99 (8%)

Query: 1  MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
          MIALLQR ++ASVVV+  T+G+IG GLMVL+CAER DTP EADALL KLLAYRVF+D+AG
Sbjct: 1  MIALLQRVTRASVVVNDVTIGAIGAGLMVLLCAERGDTPKEADALLGKLLAYRVFADDAG 60

Query: 61 KMNRSVADVQGGLLL--------DRAGGRPPTVRPFCRP 91
          KMNRSV DV GG+LL        D   G  P+  P   P
Sbjct: 61 KMNRSVTDVAGGVLLVPQFTLAADTCSGTRPSFTPAAAP 99


>ref|YP_001351993.1| D-tyrosyl-tRNA(Tyr) deacylase [Janthinobacterium sp. Marseille]
 sp|A6SUP6|DTD_JANMA RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase
 gb|ABR89850.1| D-tyrosyl-tRNA(Tyr) deacylase [Janthinobacterium sp. Marseille]
          Length = 149

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 76/121 (62%), Gaps = 9/121 (7%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           MIALLQR + ASVVVDG T+G+I  GLMVL+CAER DT  EADALL KLL+YRVFSD AG
Sbjct: 1   MIALLQRVAHASVVVDGATVGAIDAGLMVLLCAERGDTEKEADALLAKLLSYRVFSDAAG 60

Query: 61  KMNRSVADVQGGLLL--------DRAGGRPPTVRPFCRPGESQARRGG-DRSFRRRHASV 111
           KMN SV D  GG+LL        D   G  P+  P   P  ++A         R RHA +
Sbjct: 61  KMNLSVVDTAGGVLLVPQFTLAADTRSGTRPSFTPAAAPDVARALFNYFVMQARSRHADI 120

Query: 112 A 112
           A
Sbjct: 121 A 121


>ref|YP_002355552.1| D-tyrosyl-tRNA(Tyr) deacylase [Thauera sp. MZ1T]
 gb|ACK54656.1| D-tyrosyl-tRNA(Tyr) deacylase [Thauera sp. MZ1T]
          Length = 157

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 8/104 (7%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           M+A+LQR S+A V+VDG+T+G IG GL+ LVCAER DTPAEAD LL ++L  R+F+DEAG
Sbjct: 1   MLAVLQRVSEARVIVDGETIGEIGPGLLALVCAERGDTPAEADKLLARILKLRIFADEAG 60

Query: 61  KMNRSVADVQGGLLL--------DRAGGRPPTVRPFCRPGESQA 96
           KMNRSV DV GGLL+        D +GG  P+      P   QA
Sbjct: 61  KMNRSVQDVGGGLLVVSQFTLAADTSGGNRPSFTKAADPHTGQA 104


>ref|ZP_08275031.1| D-tyrosyl-tRNA(Tyr) deacylase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF31487.1| D-tyrosyl-tRNA(Tyr) deacylase [Oxalobacteraceae bacterium IMCC9480]
          Length = 152

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/103 (55%), Positives = 68/103 (66%), Gaps = 8/103 (7%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           MI L+QR ++ASVVVDG  +G+IG GL+VLVCAER D+  EAD LL KL  YRVF D AG
Sbjct: 1   MIGLIQRVTRASVVVDGHEVGAIGAGLLVLVCAERGDSQREADLLLTKLRGYRVFGDAAG 60

Query: 61  KMNRSVADVQGGLLL--------DRAGGRPPTVRPFCRPGESQ 95
           KMNRSVADV G LLL        D   G  P+  P   P +++
Sbjct: 61  KMNRSVADVGGALLLVPQFTLAADTRSGSRPSFTPAAAPEDAR 103