BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0704.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773842.1| hypothetical protein Hsero_0409 [Herbaspiril... 369 e-100 ref|YP_001351994.1| phospholipid-binding protein [Janthinobacter... 300 1e-79 ref|YP_001098608.1| toluene-induced BbsI protein [Herminiimonas ... 291 7e-77 ref|YP_004754604.1| toluene-induced BbsI protein [Collimonas fun... 290 9e-77 gb|EGW61700.1| PEBP family protein [Dechlorosoma suillum PS] 284 8e-75 >ref|YP_003773842.1| hypothetical protein Hsero_0409 [Herbaspirillum seropedicae SmR1] emb|CAM32649.1| Conserved Hypothetical [Herbaspirillum seropedicae] gb|ADJ61934.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 215 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 181/215 (84%), Positives = 197/215 (91%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHFAWSDLPAGTKSLALVMHDPDV 60 MK WSDSF+DGA IPGEF FAV DPK+HVALS NRNPHFAWS+LPAGTKSLALV+HDPDV Sbjct: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVVHDPDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTVVDIPPGVSELAAGQFSSAVTTRGKANPAIPGD 120 PSRGDDVNQEGKTVP +LPRVDF+HWT+VDIP V+E+ AGQFS+ VT RGK PA+ G+ Sbjct: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGE 120 Query: 121 PLSGARHGLNDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVVG 180 + GAR G+NDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPV G Sbjct: 121 VMPGARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVAG 180 Query: 181 NLEGSVVVTALRDHVLDQASLTGLYTLNPNAVPRS 215 NLEGSVVVTALRDHVL+QAS+TGLYTLNPNAVPRS Sbjct: 181 NLEGSVVVTALRDHVLEQASITGLYTLNPNAVPRS 215 >ref|YP_001351994.1| phospholipid-binding protein [Janthinobacterium sp. Marseille] gb|ABR90253.1| phospholipid-binding protein [Janthinobacterium sp. Marseille] Length = 215 Score = 300 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 147/212 (69%), Positives = 169/212 (79%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHFAWSDLPAGTKSLALVMHDPDV 60 MKLWSDSF+DGA IPGEF F V P +HV LS+N+NPH AWS LPA TKSLAL++HDPDV Sbjct: 1 MKLWSDSFKDGATIPGEFAFCVIAPATHVTLSANKNPHLAWSGLPAATKSLALIVHDPDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTVVDIPPGVSELAAGQFSSAVTTRGKANPAIPGD 120 PSRGDDVNQEGKTVPADLPRVDFFHWT+VD+PP ++AAG F+ VT RGK+ PAI Sbjct: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTLVDLPPDTQQIAAGSFAHGVTPRGKSGPAIANS 120 Query: 121 PLSGARHGLNDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVVG 180 P+ GARHG+NDYTGWFA D DM G YFGYDGPCPPWNDA+VHRY+FTLYALD+ +PV G Sbjct: 121 PVPGARHGINDYTGWFAQDVDMAGAYFGYDGPCPPWNDAIVHRYVFTLYALDIASVPVDG 180 Query: 181 NLEGSVVVTALRDHVLDQASLTGLYTLNPNAV 212 G V A+ HVL +AS++ YTLNP V Sbjct: 181 QFSGQQVRDAIAGHVLAEASVSASYTLNPTLV 212 >ref|YP_001098608.1| toluene-induced BbsI protein [Herminiimonas arsenicoxydans] emb|CAL60479.1| Putative phospholipid binding protein, possible toluene-induced [Herminiimonas arsenicoxydans] Length = 221 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 146/219 (66%), Positives = 168/219 (76%), Gaps = 4/219 (1%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHFAWSDLPAGTKSLALVMHDPDV 60 MKLWSD+F+DGA IPG F V DP +HVALS+N+NPH AWSD+PAGTKSLAL++HDPDV Sbjct: 2 MKLWSDTFKDGAAIPGACAFCVIDPVTHVALSANQNPHLAWSDVPAGTKSLALIVHDPDV 61 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTVVDIPPGVSELAAGQFSSAVTTRGKANPAIPGD 120 PSRGDDVNQEGKTVPADLPRVDFFHW +VD+PP + + A FS VT RGK+ PAI Sbjct: 62 PSRGDDVNQEGKTVPADLPRVDFFHWVLVDVPPDTTHIDAASFSDGVTPRGKSGPAISAS 121 Query: 121 PLSGA----RHGLNDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQL 176 P+ GA R GLNDYTGWFA D M GDYFGYDGPCPPWNDA+VHRY+FTLYALD+ +L Sbjct: 122 PIDGAQINPRQGLNDYTGWFAQDAQMAGDYFGYDGPCPPWNDAIVHRYVFTLYALDIARL 181 Query: 177 PVVGNLEGSVVVTALRDHVLDQASLTGLYTLNPNAVPRS 215 P+ G G+ A+ HVL QASL G Y LNP P + Sbjct: 182 PLNGKFGGAQARDAVAGHVLAQASLCGWYGLNPAVSPTT 220 >ref|YP_004754604.1| toluene-induced BbsI protein [Collimonas fungivorans Ter331] gb|AEK63781.1| toluene-induced BbsI protein [Collimonas fungivorans Ter331] Length = 211 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 140/209 (66%), Positives = 161/209 (77%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHFAWSDLPAGTKSLALVMHDPDV 60 M LWS SF DGA +PGEF FAV P++HV LS+N NPH W + PAGTKSLALV DPDV Sbjct: 1 MNLWSHSFNDGAYLPGEFAFAVVHPETHVTLSANHNPHLGWGEPPAGTKSLALVCCDPDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTVVDIPPGVSELAAGQFSSAVTTRGKANPAIPGD 120 PSRGDDVNQEGKTVPA+LPRVDFFHW +VD+PP + + AG FS VT+RGK P I G Sbjct: 61 PSRGDDVNQEGKTVPAELPRVDFFHWVLVDLPPHATSIEAGTFSDRVTSRGKPGPEIYGS 120 Query: 121 PLSGARHGLNDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVVG 180 P+ GARHGLNDYTGWFAGD M GDYFGYDGPCPPWND VHRY+FT+YALD+ +LPV G Sbjct: 121 PIPGARHGLNDYTGWFAGDAAMSGDYFGYDGPCPPWNDETVHRYVFTVYALDIARLPVDG 180 Query: 181 NLEGSVVVTALRDHVLDQASLTGLYTLNP 209 G + A+R H+L + S+ LYTLNP Sbjct: 181 KFTGQQALAAIRGHILGETSIVSLYTLNP 209 >gb|EGW61700.1| PEBP family protein [Dechlorosoma suillum PS] Length = 209 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 136/209 (65%), Positives = 156/209 (74%), Gaps = 4/209 (1%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHFAWSDLPAGTKSLALVMHDPDV 60 MKL S SF DG IPGEF F +P + HV L N NPH WSD+P GT+S AL+ HDPDV Sbjct: 1 MKLESKSFSDGQPIPGEFAFCIPHAQHHVCLGGNHNPHLRWSDVPIGTRSFALICHDPDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTVVDIPPGVSELAAGQFSSAVTTRGKANPAIPGD 120 PS GDDVNQEG++VPADLPRVDFFHW + DI E+ AG+F S VT RGK PA Sbjct: 61 PSTGDDVNQEGRSVPADLPRVDFFHWVLTDISAMRREIRAGEFCSEVTPRGKPGPA---- 116 Query: 121 PLSGARHGLNDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVVG 180 L G+RHG+NDYTGWFAGDGDM GDY+GYDGPCPPWNDAL HRY+FT+YALDVEQLPV G Sbjct: 117 SLEGSRHGINDYTGWFAGDGDMSGDYYGYDGPCPPWNDALRHRYVFTIYALDVEQLPVTG 176 Query: 181 NLEGSVVVTALRDHVLDQASLTGLYTLNP 209 G+ + A+ H+L QA LTG Y+LNP Sbjct: 177 RFSGADLRQAMEGHILAQAQLTGTYSLNP 205