BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0685.p         (151 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773857.1| hypothetical protein Hsero_0424 [Herbaspiril...   266   7e-70
ref|YP_004751368.1| hypothetical protein CFU_0711 [Collimonas fu...   207   6e-52
ref|YP_001352002.1| hypothetical protein mma_0312 [Janthinobacte...   206   1e-51
ref|YP_001098616.1| hypothetical protein HEAR0259 [Herminiimonas...   203   8e-51
ref|YP_001759831.1| hypothetical protein Swoo_1444 [Shewanella w...   198   3e-49

>ref|YP_003773857.1| hypothetical protein Hsero_0424 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61949.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 151

 Score =  266 bits (680), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 141/150 (94%), Positives = 144/150 (96%)

Query: 1   MAIWVDADACPGVIKDMLFRVADRTTIIVTLVANRPLRTPPSRYIKSMVVPAGFDVADKE 60
           MAIWVDADACPGVIKDMLFRVADRTTI VTLVANRPLRTPPSRYIKSMVVPAGFDVAD+E
Sbjct: 1   MAIWVDADACPGVIKDMLFRVADRTTITVTLVANRPLRTPPSRYIKSMVVPAGFDVADRE 60

Query: 61  IARQCEPGDLVITADIPLAADVVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV 120
           IAR    GDLV+TADIPLAA+VVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV
Sbjct: 61  IARLVASGDLVVTADIPLAAEVVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV 120

Query: 121 ETGGPAAFSASDGRAFARELDRYVLKASRP 150
           ETGGPAAFSA DGRAFARELDRYVLKASRP
Sbjct: 121 ETGGPAAFSAGDGRAFARELDRYVLKASRP 150


>ref|YP_004751368.1| hypothetical protein CFU_0711 [Collimonas fungivorans Ter331]
 gb|AEK60545.1| hypothetical protein CFU_0711 [Collimonas fungivorans Ter331]
          Length = 175

 Score =  207 bits (526), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 104/147 (70%), Positives = 120/147 (81%)

Query: 1   MAIWVDADACPGVIKDMLFRVADRTTIIVTLVANRPLRTPPSRYIKSMVVPAGFDVADKE 60
           M IWVDADACPGVIK++LFRVADR  I+VTLVANR LR PPSR+IK++ V +GFDVAD+E
Sbjct: 26  MQIWVDADACPGVIKEILFRVADRLQIVVTLVANRLLRVPPSRFIKAVQVASGFDVADRE 85

Query: 61  IARQCEPGDLVITADIPLAADVVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV 120
           I R  + GDLVITADIPLAADV+ KG  ALNPRGE YT  NI  HL+ RNFM+ELR SGV
Sbjct: 86  IVRLLQAGDLVITADIPLAADVLEKGGNALNPRGEFYTKDNIQQHLTMRNFMDELRGSGV 145

Query: 121 ETGGPAAFSASDGRAFARELDRYVLKA 147
           ETGGPAAFS SD   FA +LDR++ K+
Sbjct: 146 ETGGPAAFSQSDRHLFAAQLDRFLQKS 172


>ref|YP_001352002.1| hypothetical protein mma_0312 [Janthinobacterium sp. Marseille]
 sp|A6SUQ5|Y312_JANMA RecName: Full=UPF0178 protein mma_0312
 gb|ABR89957.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 151

 Score =  206 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 102/146 (69%), Positives = 119/146 (81%)

Query: 1   MAIWVDADACPGVIKDMLFRVADRTTIIVTLVANRPLRTPPSRYIKSMVVPAGFDVADKE 60
           M IWVDADACP VIKD+LFRVADR  + VTLVAN+ LRTPPSR+IK++ VPAGFDVAD E
Sbjct: 1   MQIWVDADACPNVIKDVLFRVADRLQVQVTLVANKLLRTPPSRFIKAIQVPAGFDVADNE 60

Query: 61  IARQCEPGDLVITADIPLAADVVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV 120
           I R  + GDLVITADIPLAADV+ KG   LNPRGE YT  NI  HL+ R+FM++LRSSGV
Sbjct: 61  IVRLVQAGDLVITADIPLAADVLEKGGHPLNPRGEFYTKDNIQQHLTMRSFMDDLRSSGV 120

Query: 121 ETGGPAAFSASDGRAFARELDRYVLK 146
           +TGGP+AFS  D RAFA +LDRY+ +
Sbjct: 121 DTGGPSAFSQGDIRAFANQLDRYLAR 146


>ref|YP_001098616.1| hypothetical protein HEAR0259 [Herminiimonas arsenicoxydans]
 sp|A4G1V0|Y259_HERAR RecName: Full=UPF0178 protein HEAR0259
 emb|CAL60487.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 149

 Score =  203 bits (516), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 100/149 (67%), Positives = 117/149 (78%)

Query: 1   MAIWVDADACPGVIKDMLFRVADRTTIIVTLVANRPLRTPPSRYIKSMVVPAGFDVADKE 60
           M IWVDADACP VIKD+LFRVADR  + VTLVAN+ LRTPPSR+I+++ VPAGFDVAD E
Sbjct: 1   MQIWVDADACPSVIKDVLFRVADRLQVQVTLVANKLLRTPPSRFIRAIQVPAGFDVADNE 60

Query: 61  IARQCEPGDLVITADIPLAADVVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV 120
           I R  + GDLVIT DIPLAADV+ KG L LNPRGE YT   I   L+ R FM+ELRSSGV
Sbjct: 61  IVRLVQEGDLVITGDIPLAADVLEKGGLPLNPRGEFYTKDTIQQQLTMRTFMDELRSSGV 120

Query: 121 ETGGPAAFSASDGRAFARELDRYVLKASR 149
           +TGGPAAFS SD R FA +LDR++ +  +
Sbjct: 121 DTGGPAAFSQSDTRNFANQLDRFLTRTGK 149


>ref|YP_001759831.1| hypothetical protein Swoo_1444 [Shewanella woodyi ATCC 51908]
 sp|B1KJR3|Y1444_SHEWM RecName: Full=UPF0178 protein Swoo_1444
 gb|ACA85736.1| protein of unknown function DUF188 [Shewanella woodyi ATCC 51908]
          Length = 151

 Score =  198 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 96/150 (64%), Positives = 120/150 (80%)

Query: 1   MAIWVDADACPGVIKDMLFRVADRTTIIVTLVANRPLRTPPSRYIKSMVVPAGFDVADKE 60
           M IWVDADACPGVIK++LFRVADR  + VTLVAN  +R PPSRYI  + VP+GFDVAD E
Sbjct: 1   MKIWVDADACPGVIKEILFRVADRAKVEVTLVANHSMRIPPSRYINMVTVPSGFDVADDE 60

Query: 61  IARQCEPGDLVITADIPLAADVVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV 120
           I ++ + GDLVITADIPLA++V+ KG +ALNPRGELYT QNI   L+ R+FM+ +R+SGV
Sbjct: 61  IVKRLDAGDLVITADIPLASEVIDKGGVALNPRGELYTEQNIKSILNMRDFMDTMRASGV 120

Query: 121 ETGGPAAFSASDGRAFARELDRYVLKASRP 150
           +TGGPAA  AS+ +AF  +LDR+V K  +P
Sbjct: 121 QTGGPAAIGASEKQAFGNQLDRFVTKHHKP 150