BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0670.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773864.1| DNA-binding ferritin-like protein [Herbaspir... 320 4e-86 ref|YP_004751377.1| Iron-binding ferritin-like antioxidant prote... 279 1e-73 ref|YP_002006575.1| DNA-binding protein, dps family [Cupriavidus... 265 2e-69 ref|YP_297009.1| Ferritin and Dps [Ralstonia eutropha JMP134] >g... 265 3e-69 ref|YP_585082.1| metalloregulation DNA-binding stress protein [C... 264 3e-69 >ref|YP_003773864.1| DNA-binding ferritin-like protein [Herbaspirillum seropedicae SmR1] emb|CAM32646.1| DNA-binding ferritin-like protein (oxidative damage protectant) protein [Herbaspirillum seropedicae] gb|ADJ61956.1| DNA-binding ferritin-like protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 163/164 (99%), Positives = 164/164 (100%) Query: 15 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 74 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 Query: 75 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPNAQEMIAQLVAGQEA 134 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEA+GVPNAQEMIAQLVAGQEA Sbjct: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 Query: 135 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG 178 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG Sbjct: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG 164 >ref|YP_004751377.1| Iron-binding ferritin-like antioxidant protein [Collimonas fungivorans Ter331] gb|AEK60554.1| Iron-binding ferritin-like antioxidant protein [Collimonas fungivorans Ter331] Length = 187 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 141/163 (86%), Positives = 148/163 (90%), Gaps = 2/163 (1%) Query: 15 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 74 M KK+VA I+IGI+DKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 26 MVKKSVAV--IDIGISDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 83 Query: 75 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPNAQEMIAQLVAGQEA 134 E QYNEL LAVDLIAERIRALGYPAP +YK F+KL+SI E EGVPNA MI QLV GQEA Sbjct: 84 ETQYNELWLAVDLIAERIRALGYPAPATYKAFSKLTSITEEEGVPNATAMIQQLVQGQEA 143 Query: 135 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLE 177 VTRTARSIFP VDAA+DEPTADLLTQRMQLHEKNAWMLRSLLE Sbjct: 144 VTRTARSIFPVVDAASDEPTADLLTQRMQLHEKNAWMLRSLLE 186 >ref|YP_002006575.1| DNA-binding protein, dps family [Cupriavidus taiwanensis LMG 19424] emb|CAQ70514.1| putative DNA-binding protein, dps family [Cupriavidus taiwanensis LMG 19424] Length = 161 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 135/162 (83%), Positives = 145/162 (89%), Gaps = 2/162 (1%) Query: 15 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 74 MAKKN S+NIGI+DKDRKKIA+GLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKN--EMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 58 Query: 75 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPNAQEMIAQLVAGQEA 134 E QYNELALAVD IAERIRALGYPAPG+YKE+A+LSSI E EGVP A EMI +LV GQEA Sbjct: 59 ETQYNELALAVDSIAERIRALGYPAPGTYKEYARLSSIAEEEGVPEATEMIRKLVEGQEA 118 Query: 135 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 176 V RTARSIFP +DAA DEP+ADLLTQRMQ HEK AWMLRS+L Sbjct: 119 VVRTARSIFPVIDAAGDEPSADLLTQRMQTHEKTAWMLRSML 160 >ref|YP_297009.1| Ferritin and Dps [Ralstonia eutropha JMP134] gb|AAZ62165.1| Ferritin and Dps [Ralstonia eutropha JMP134] Length = 161 Score = 265 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 136/162 (83%), Positives = 146/162 (90%), Gaps = 2/162 (1%) Query: 15 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 74 MAKKN S+NIGI+DKDRKKIA+GLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKN--EMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 58 Query: 75 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPNAQEMIAQLVAGQEA 134 E QYNELALAVD IAERIRALGYPAPG+YKE+A+LSSI E EGVP A EMI +LV GQEA Sbjct: 59 ETQYNELALAVDSIAERIRALGYPAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEA 118 Query: 135 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 176 V RTARSIFP VDAA+DEP+ADLLTQRMQ HEK AWMLRS+L Sbjct: 119 VVRTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSML 160 >ref|YP_585082.1| metalloregulation DNA-binding stress protein [Cupriavidus metallidurans CH34] gb|ABF09813.1| DNA protection during starvation or oxydative stress transcription regulator protein; Metalloregulation DNA-binding stress protein [Cupriavidus metallidurans CH34] Length = 161 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 135/162 (83%), Positives = 144/162 (88%), Gaps = 2/162 (1%) Query: 15 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 74 MAKKN S+NIGI+DKDRKKIA+GL KLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKN--EMSVNIGISDKDRKKIAEGLCKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 58 Query: 75 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPNAQEMIAQLVAGQEA 134 E QYNELALAVD IAERIRALGYPAPG+YKE+AKLSSI E EGVP A EMI +LV GQEA Sbjct: 59 ETQYNELALAVDAIAERIRALGYPAPGTYKEYAKLSSIAEEEGVPEATEMIRKLVEGQEA 118 Query: 135 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 176 V RTARS+FP +DAA DEP+ADLLTQRMQ HEK AWMLRSLL Sbjct: 119 VVRTARSLFPAIDAAGDEPSADLLTQRMQTHEKTAWMLRSLL 160