BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0665.p (365 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773868.1| DnaJ-class molecular chaperone protein [Herb... 345 1e-92 ref|YP_002232777.1| DnaJ domain-containing protein [Burkholderia... 241 2e-61 ref|ZP_04942689.1| DnaJ-class molecular chaperone [Burkholderia ... 238 2e-60 ref|YP_624862.1| heat shock protein DnaJ-like [Burkholderia ceno... 233 4e-59 ref|YP_001777968.1| heat shock protein DnaJ domain-containing pr... 231 2e-58 >ref|YP_003773868.1| DnaJ-class molecular chaperone protein [Herbaspirillum seropedicae SmR1] gb|ADJ61960.1| DnaJ-class molecular chaperone protein [Herbaspirillum seropedicae SmR1] Length = 367 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 257/365 (70%), Positives = 289/365 (79%), Gaps = 5/365 (1%) Query: 1 MNKPTPQTVAIVDGQSAMRLSPAQEQFNALIDAIGTRRAQLKEWEAASDEFHKKFTAQYV 60 M+KPTP V +V+GQSA RLSPAQE+FNALIDAIG RRA+LKEWE ASDEFH+K+ AQYV Sbjct: 1 MHKPTPHDVTLVNGQSATRLSPAQEKFNALIDAIGARRARLKEWETASDEFHRKYAAQYV 60 Query: 61 PLEQELLTLKRQVVYRLHAAWPDKALGKGERIALSALIADMAQALLQRADDAELALTYQQ 120 PLEQELL LKRQ VYRLH AW KALGKGERI LSALIADMAQALLQR++DAELAL YQQ Sbjct: 61 PLEQELLGLKRQAVYRLHEAWAHKALGKGERITLSALIADMAQALLQRSEDAELALIYQQ 120 Query: 121 HAEEEETEEPASVAEVHEDKTIQAEPAIAEDDFTTGTPEEIMQRMEAMLERQERERMQAA 180 HAEEE E A +IAEDDFTTGTPEEIMQRMEAMLERQERER AA Sbjct: 121 HAEEEHAAEIAH-----APSPPGGNESIAEDDFTTGTPEEIMQRMEAMLERQERERQAAA 175 Query: 181 QAREAQRASRKKPPKQRAAEARQQEQRIELSQSIRAVYRRLASALHPDRELDESERARKT 240 QAREA RASRKKPPKQRAAE +QQ QR ELSQSIRAVYRRLASALHPDRE DE ER RKT Sbjct: 176 QAREAGRASRKKPPKQRAAEHQQQAQRTELSQSIRAVYRRLASALHPDREPDEDERTRKT 235 Query: 241 ALMQQVNQAYEKNDLSRLLELQLELEQIDQRSIHGVSEERLTHYNHILTEQLGDLDQEIA 300 ALMQQVNQAYEKNDL +LLELQLELE I + + VSE RL HYN IL EQ +LDQEI Sbjct: 236 ALMQQVNQAYEKNDLLKLLELQLELEHITRHTQTEVSEARLAHYNQILQEQADELDQEII 295 Query: 301 HMERHFRQTFGLGPAARVSPKGIGRDLNKVIAGMRQEMRDVGIVLGSFDDVEQVRAWLKQ 360 H++R FR+ +GL AR++P+ + R LN+ I +RQE +D+ L +F D+EQVR+WLK Sbjct: 296 HVQRQFRRAYGLPSTARLTPEKMMRYLNRGITALRQEGQDLRAALAAFGDIEQVRSWLKH 355 Query: 361 GGRRQ 365 R++ Sbjct: 356 ARRQR 360 >ref|YP_002232777.1| DnaJ domain-containing protein [Burkholderia cenocepacia J2315] emb|CAR54000.1| DnaJ domain protein [Burkholderia cenocepacia J2315] Length = 375 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 172/356 (48%), Positives = 227/356 (63%) Query: 9 VAIVDGQSAMRLSPAQEQFNALIDAIGTRRAQLKEWEAASDEFHKKFTAQYVPLEQELLT 68 VAI G LS AQ+ FN L+ I TRR +L WEA F KKF +PLEQE Sbjct: 9 VAIAPGHETASLSKAQQTFNTLVKQIETRRERLGAWEAVMPAFQKKFVDALLPLEQEATA 68 Query: 69 LKRQVVYRLHAAWPDKALGKGERIALSALIADMAQALLQRADDAELALTYQQHAEEEETE 128 L+ ++++ L A+ K L K E+ LS LI DMA+ LL +DDA L + Y +HA T Sbjct: 69 LRIRLIHLLDDAFLQKGLSKAEQRTLSDLIVDMARDLLDVSDDATLKIIYDRHAGPAHTG 128 Query: 129 EPASVAEVHEDKTIQAEPAIAEDDFTTGTPEEIMQRMEAMLERQERERMQAAQAREAQRA 188 A E + Q +D T +P+E+ RM+A L+ Q M A AREAQRA Sbjct: 129 HAAGAPEPAKPGREQEPEPQPPEDLDTLSPDELAARMQAELDAQFERDMAAHAAREAQRA 188 Query: 189 SRKKPPKQRAAEARQQEQRIELSQSIRAVYRRLASALHPDRELDESERARKTALMQQVNQ 248 RKK PKQ AA+AR + ++ E S+SIR +YR+LASALHPDRE D E+ RKT LMQ+VN+ Sbjct: 189 KRKKAPKQSAAQARIEAEQAESSKSIREIYRKLASALHPDREPDPQEQQRKTVLMQRVNR 248 Query: 249 AYEKNDLSRLLELQLELEQIDQRSIHGVSEERLTHYNHILTEQLGDLDQEIAHMERHFRQ 308 AYEK +L +LLELQLE+EQID+R+I G+ E RLT YN IL EQL +LDQEI H+E FR+ Sbjct: 249 AYEKGNLLQLLELQLEIEQIDRRAIDGLGEARLTRYNGILEEQLRELDQEIVHVEHDFRR 308 Query: 309 TFGLGPAARVSPKGIGRDLNKVIAGMRQEMRDVGIVLGSFDDVEQVRAWLKQGGRR 364 T+G+ P+ +V+P + R L + IAGM++ +D+ + L F+D +QVR WLK RR Sbjct: 309 TYGIAPSTKVAPDTVLRMLARDIAGMQRSNQDLTVTLREFEDPDQVRNWLKDMKRR 364 >ref|ZP_04942689.1| DnaJ-class molecular chaperone [Burkholderia cenocepacia PC184] gb|EAY65860.1| DnaJ-class molecular chaperone [Burkholderia cenocepacia PC184] Length = 403 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 170/356 (47%), Positives = 226/356 (63%) Query: 9 VAIVDGQSAMRLSPAQEQFNALIDAIGTRRAQLKEWEAASDEFHKKFTAQYVPLEQELLT 68 VAI G LS AQ+ FN L+ I RR +L WEA F KKF +PLEQE Sbjct: 37 VAIAPGHETASLSKAQQTFNTLVKQIEKRRERLGAWEAVMPAFQKKFVDGLLPLEQEATA 96 Query: 69 LKRQVVYRLHAAWPDKALGKGERIALSALIADMAQALLQRADDAELALTYQQHAEEEETE 128 L+ ++++ L A+ + L K E+ LS LI DMA LL +DDA L + Y +HA Sbjct: 97 LRIRLIHLLDDAFLQRGLSKAEQRTLSDLIVDMAGDLLDVSDDATLKIIYNRHAGPAHAG 156 Query: 129 EPASVAEVHEDKTIQAEPAIAEDDFTTGTPEEIMQRMEAMLERQERERMQAAQAREAQRA 188 A+ E + Q +D T +PEE+ +RM+A L+ Q M A AREAQRA Sbjct: 157 HVAAAPEPAKPGREQEPEPQPPEDLDTLSPEELAERMQAELDAQFERDMAAHAAREAQRA 216 Query: 189 SRKKPPKQRAAEARQQEQRIELSQSIRAVYRRLASALHPDRELDESERARKTALMQQVNQ 248 RKK PKQ AA+AR + ++ E S+SIR +YR+LASALHPDRE D E+ RKT LMQ+VN+ Sbjct: 217 KRKKAPKQSAAQARIEAEQAESSKSIREIYRKLASALHPDREPDPQEQQRKTVLMQRVNR 276 Query: 249 AYEKNDLSRLLELQLELEQIDQRSIHGVSEERLTHYNHILTEQLGDLDQEIAHMERHFRQ 308 AYEK +L +LLELQLE+EQID+R+I G+SE RLT YN IL EQL +LDQEI H+E FR+ Sbjct: 277 AYEKGNLLQLLELQLEIEQIDRRAIDGLSEARLTRYNGILEEQLRELDQEIVHVENDFRR 336 Query: 309 TFGLGPAARVSPKGIGRDLNKVIAGMRQEMRDVGIVLGSFDDVEQVRAWLKQGGRR 364 T+G+ + +V+P + R L + IAGM++ +D+ + L F+D +QVR WLK RR Sbjct: 337 TYGIASSTKVAPDTVLRMLARDIAGMQRSNQDLTVALREFEDPDQVRNWLKDMKRR 392 >ref|YP_624862.1| heat shock protein DnaJ-like [Burkholderia cenocepacia AU 1054] ref|YP_839472.1| heat shock protein DnaJ domain-containing protein [Burkholderia cenocepacia HI2424] gb|ABF79889.1| heat shock protein DnaJ-like protein [Burkholderia cenocepacia AU 1054] gb|ABK12579.1| heat shock protein DnaJ domain protein [Burkholderia cenocepacia HI2424] Length = 375 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 168/356 (47%), Positives = 225/356 (63%) Query: 9 VAIVDGQSAMRLSPAQEQFNALIDAIGTRRAQLKEWEAASDEFHKKFTAQYVPLEQELLT 68 VAI G LS AQ+ FN L+ I RR +L WEA F KKF +PLEQE Sbjct: 9 VAIAPGHETASLSKAQQTFNTLVKQIEKRRERLGAWEAVMPAFQKKFVDGLLPLEQEATA 68 Query: 69 LKRQVVYRLHAAWPDKALGKGERIALSALIADMAQALLQRADDAELALTYQQHAEEEETE 128 L+ ++++ L A+ K L K E+ LS LI DMA LL +DDA L + Y +HA T Sbjct: 69 LRIRLIHLLDDAFLQKGLSKAEQRTLSDLIVDMAGDLLDVSDDATLKIIYNRHAGPAHTG 128 Query: 129 EPASVAEVHEDKTIQAEPAIAEDDFTTGTPEEIMQRMEAMLERQERERMQAAQAREAQRA 188 A+ E + Q + T +PEE+ +R++A L+ Q M A AREAQRA Sbjct: 129 HEAAAPEPAKPGREQEPEPQPPEGLDTLSPEELAERLQAELDAQFERDMAAHAAREAQRA 188 Query: 189 SRKKPPKQRAAEARQQEQRIELSQSIRAVYRRLASALHPDRELDESERARKTALMQQVNQ 248 RKK PKQ AA+AR + ++ E ++SIR +YR+LASALHPDRE D E+ RKT LMQ+VN+ Sbjct: 189 KRKKAPKQSAAQARIEAEQAESNKSIREIYRKLASALHPDREPDPQEQQRKTVLMQRVNR 248 Query: 249 AYEKNDLSRLLELQLELEQIDQRSIHGVSEERLTHYNHILTEQLGDLDQEIAHMERHFRQ 308 AYEK +L +LLELQLE+EQID+R+I G+SE RLT YN IL EQL +LDQEI H+E FR+ Sbjct: 249 AYEKGNLLQLLELQLEIEQIDRRAIDGLSEARLTRYNGILEEQLRELDQEIVHVENDFRR 308 Query: 309 TFGLGPAARVSPKGIGRDLNKVIAGMRQEMRDVGIVLGSFDDVEQVRAWLKQGGRR 364 T+G+ + +V+P + R L + IAG ++ +D+ + L F+D +QVR WLK RR Sbjct: 309 TYGIASSTKVAPDTVLRMLARDIAGTQRSNQDLSVALREFEDPDQVRNWLKDMKRR 364 >ref|YP_001777968.1| heat shock protein DnaJ domain-containing protein [Burkholderia cenocepacia MC0-3] gb|ACA93478.1| heat shock protein DnaJ domain protein [Burkholderia cenocepacia MC0-3] Length = 375 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 169/356 (47%), Positives = 227/356 (63%) Query: 9 VAIVDGQSAMRLSPAQEQFNALIDAIGTRRAQLKEWEAASDEFHKKFTAQYVPLEQELLT 68 VAI G LS AQ+ FN L+ I RR +L WEA F KKF +PLEQE Sbjct: 9 VAIAPGHETASLSKAQQTFNTLVKQIEKRRERLGAWEAVMPAFQKKFVDALLPLEQEATA 68 Query: 69 LKRQVVYRLHAAWPDKALGKGERIALSALIADMAQALLQRADDAELALTYQQHAEEEETE 128 L+ ++++ L A+ K L K E+ LS LI DMA+ LL +DDA L + Y +HA T Sbjct: 69 LRIRLIHLLDDAFLQKGLSKAEQRRLSDLIVDMARDLLDVSDDATLKIIYNRHAGPAHTG 128 Query: 129 EPASVAEVHEDKTIQAEPAIAEDDFTTGTPEEIMQRMEAMLERQERERMQAAQAREAQRA 188 A+ E + Q ++ T +P+E+ RM+A L+ Q M A AREAQRA Sbjct: 129 HAAAAPEPAKPGREQEPEPEQPENLDTLSPDELAARMQAELDAQFERDMAAHAAREAQRA 188 Query: 189 SRKKPPKQRAAEARQQEQRIELSQSIRAVYRRLASALHPDRELDESERARKTALMQQVNQ 248 RKK PKQ AA+AR + ++ E ++SIR +YR+LASALHPDRE D E+ RKT LMQ+VN+ Sbjct: 189 KRKKAPKQSAAQARIEAEQAESNKSIREIYRKLASALHPDREPDPQEQQRKTVLMQRVNR 248 Query: 249 AYEKNDLSRLLELQLELEQIDQRSIHGVSEERLTHYNHILTEQLGDLDQEIAHMERHFRQ 308 AYEK +L +LLELQLE+EQID+R+I G+SE RLT YN IL EQL +LDQEI H+E FR+ Sbjct: 249 AYEKGNLLQLLELQLEIEQIDRRAIDGLSEARLTRYNGILEEQLRELDQEIVHVENDFRR 308 Query: 309 TFGLGPAARVSPKGIGRDLNKVIAGMRQEMRDVGIVLGSFDDVEQVRAWLKQGGRR 364 T+G+ + +V+P + R L + IAGM++ +D+ + L F+D +QVR WLK RR Sbjct: 309 TYGIASSTKVAPDTVLRMLARDIAGMQRSNQDLTVALREFEDPDQVRNWLKDMKRR 364