BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0659.p (271 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773875.1| sugar ABC transporter permease [Herbaspirill... 432 e-119 ref|YP_004751755.1| Various polyols ABC transporter permease 2 [... 399 e-109 ref|YP_002912714.1| putative ABC transporter permease [Burkholde... 357 1e-96 ref|YP_004361853.1| Putative ABC transporter permease protein [B... 356 2e-96 ref|ZP_04940687.1| Maltose/maltodextrin transport permease [Burk... 354 9e-96 >ref|YP_003773875.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ61967.1| ABC-type sugar transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 271 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 267/271 (98%), Positives = 271/271 (100%) Query: 1 MSDPKKSPLWVAVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLIFLPTLDTFREVFSR 60 MSDPKKSPLWVAVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSL+FLPTL+TFREVFSR Sbjct: 1 MSDPKKSPLWVAVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLVFLPTLETFREVFSR 60 Query: 61 SHYLGYVQNSLIVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLI 120 SHYLGYVQNSLIVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLI Sbjct: 61 SHYLGYVQNSLIVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLI 120 Query: 121 PIYLLAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 PIYL+AKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM Sbjct: 121 PIYLMAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 Query: 181 IYLLLPTAMPGLASTALLLIILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLS 240 IYLLLPTAMPGLASTALLL+ILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLS Sbjct: 181 IYLLLPTAMPGLASTALLLVILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLS 240 Query: 241 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK 271 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK Sbjct: 241 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK 271 >ref|YP_004751755.1| Various polyols ABC transporter permease 2 [Collimonas fungivorans Ter331] gb|AEK60932.1| Various polyols ABC transporter, permease component 2 [Collimonas fungivorans Ter331] Length = 271 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 235/271 (86%), Positives = 254/271 (93%) Query: 1 MSDPKKSPLWVAVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLIFLPTLDTFREVFSR 60 MS K+ LW+ +L WACAI+LFFPIFWVA+TAFKTE QAY P+LIF PTL++F EV +R Sbjct: 1 MSAKNKNRLWLGLLAWACAIILFFPIFWVAITAFKTEHQAYVPTLIFWPTLESFHEVMAR 60 Query: 61 SHYLGYVQNSLIVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLI 120 S+Y+ +V NSLIVSLGST+LSLL+AVPAAY+MAFFPT RTQKLLLWMLSTKMMPAVGVLI Sbjct: 61 SNYMNFVGNSLIVSLGSTILSLLIAVPAAYAMAFFPTARTQKLLLWMLSTKMMPAVGVLI 120 Query: 121 PIYLLAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 PIYLLAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM Sbjct: 121 PIYLLAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 Query: 181 IYLLLPTAMPGLASTALLLIILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLS 240 +YLLLPT+MPGL STALLLIILSWNEAFWS+NLTSV+ APLTVFIASYSNPEGLFWAKLS Sbjct: 181 VYLLLPTSMPGLVSTALLLIILSWNEAFWSINLTSVSGAPLTVFIASYSNPEGLFWAKLS 240 Query: 241 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK 271 AASLLAIAPIM LGWLAQKQLVRGLTFGAVK Sbjct: 241 AASLLAIAPIMVLGWLAQKQLVRGLTFGAVK 271 >ref|YP_002912714.1| putative ABC transporter permease [Burkholderia glumae BGR1] gb|ACR30010.1| Putative ABC transporter permease protein [Burkholderia glumae BGR1] Length = 285 Score = 357 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 202/260 (77%), Positives = 236/260 (90%) Query: 12 AVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLIFLPTLDTFREVFSRSHYLGYVQNSL 71 VL W A++LFFPIFW+A+TAFKTE QAY+ SLIF PTLD+FREVF+RS+Y G+ NS+ Sbjct: 26 GVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLIFTPTLDSFREVFARSNYFGFAWNSI 85 Query: 72 IVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLIPIYLLAKNTGL 131 +VS+G TLL LLLAVPAAY+MAFFP RTQK+LLWMLSTKMMP+VGVL+PIYLL KN+GL Sbjct: 86 LVSVGVTLLCLLLAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGL 145 Query: 132 LDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEMIYLLLPTAMPG 191 LDTV+GL I+YTLINLPIAVWM FTYF ++P++ILEA RIDGA WQE++YLL+P A+PG Sbjct: 146 LDTVSGLVIVYTLINLPIAVWMTFTYFAEIPRDILEAGRIDGATTWQEIVYLLMPMALPG 205 Query: 192 LASTALLLIILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLSAASLLAIAPIM 251 LASTALLL+ILSWNEAFWS+NLTS NAAPLTVFIASYS+PEGLFWAKLSAASLLA+API+ Sbjct: 206 LASTALLLVILSWNEAFWSINLTSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPIL 265 Query: 252 ALGWLAQKQLVRGLTFGAVK 271 +GWL+QKQLVRGLTFGAVK Sbjct: 266 IVGWLSQKQLVRGLTFGAVK 285 >ref|YP_004361853.1| Putative ABC transporter permease protein [Burkholderia gladioli BSR3] gb|AEA61897.1| Putative ABC transporter permease protein [Burkholderia gladioli BSR3] Length = 281 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 199/260 (76%), Positives = 237/260 (91%) Query: 12 AVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLIFLPTLDTFREVFSRSHYLGYVQNSL 71 VL W A++LFFPIFW+A+TAFKTE QAY+ SLIF PTLD+FREVF+RS+Y G+ NS+ Sbjct: 22 GVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLIFTPTLDSFREVFARSNYFGFAWNSI 81 Query: 72 IVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLIPIYLLAKNTGL 131 ++S+G T++ LL AVPAAY+MAFFPTGRTQK+LLWMLSTKMMP+VGVL+PIYLL KN+GL Sbjct: 82 LISVGVTVVCLLFAVPAAYAMAFFPTGRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGL 141 Query: 132 LDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEMIYLLLPTAMPG 191 LDTV+G+ IIYTLINLPIAVWM FTYF ++P++ILEA RIDGA WQE++YLL+P A+PG Sbjct: 142 LDTVSGVVIIYTLINLPIAVWMTFTYFTEIPRDILEAGRIDGATTWQEIVYLLMPMALPG 201 Query: 192 LASTALLLIILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLSAASLLAIAPIM 251 LAST+LLL+ILSWNEAFWS+NLTS NAAPLTVFIASYS+PEGLFWAKLSAASLLA+API+ Sbjct: 202 LASTSLLLVILSWNEAFWSINLTSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPIL 261 Query: 252 ALGWLAQKQLVRGLTFGAVK 271 +GWL+QKQLVRGLTFGAVK Sbjct: 262 IVGWLSQKQLVRGLTFGAVK 281 >ref|ZP_04940687.1| Maltose/maltodextrin transport permease [Burkholderia cenocepacia PC184] gb|EAY63858.1| Maltose/maltodextrin transport permease [Burkholderia cenocepacia PC184] Length = 283 Score = 354 bits (908), Expect = 9e-96, Method: Composition-based stats. Identities = 198/260 (76%), Positives = 234/260 (90%) Query: 12 AVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLIFLPTLDTFREVFSRSHYLGYVQNSL 71 L W A++LFFPIFW+A+TAFKTE QAY SL F+PTLD+FREVF+RS+Y G+ NS+ Sbjct: 24 GTLAWLIALLLFFPIFWMAITAFKTEQQAYASSLFFMPTLDSFREVFARSNYFGFAWNSI 83 Query: 72 IVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLIPIYLLAKNTGL 131 ++S G T++SLL AVPAAY+MAFFP RTQK+LLWMLSTKMMP+VGVL+PIYLL KN GL Sbjct: 84 LISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGL 143 Query: 132 LDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEMIYLLLPTAMPG 191 LDTV+GL I+YTLINLPIAVWM FTYFN++PK+ILEA RIDGA+ WQE++YLL+P A+PG Sbjct: 144 LDTVSGLVIVYTLINLPIAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPG 203 Query: 192 LASTALLLIILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLSAASLLAIAPIM 251 LASTALLL+ILSWNEAFWS+NL+S NAAPLTVFIASYS+PEGLFWAKLSAASLLA+API+ Sbjct: 204 LASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPIL 263 Query: 252 ALGWLAQKQLVRGLTFGAVK 271 +GWL+QKQLVRGLTFGAVK Sbjct: 264 IVGWLSQKQLVRGLTFGAVK 283