BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0653.p (500 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773879.1| sugar (pentulose and hexulose) kinase [Herba... 867 0.0 ref|YP_004751751.1| xylulose kinase [Collimonas fungivorans Ter3... 650 0.0 ref|YP_003908068.1| xylulokinase [Burkholderia sp. CCGE1003] >gi... 618 e-175 ref|ZP_03268003.1| xylulokinase [Burkholderia sp. H160] >gi|2095... 617 e-174 ref|YP_003606060.1| xylulokinase [Burkholderia sp. CCGE1002] >gi... 616 e-174 >ref|YP_003773879.1| sugar (pentulose and hexulose) kinase [Herbaspirillum seropedicae SmR1] gb|ADJ61971.1| sugar (pentulose and hexulose) kinase protein [Herbaspirillum seropedicae SmR1] Length = 490 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 461/488 (94%), Positives = 470/488 (96%) Query: 11 MYLGIDLGTSEVKAVVIDETGALLALAGSTLTVSRPHPRWSEQSPADWWLATCATVDKLR 70 MYLGIDLGTSEVKAVVID G+L+ALAGSTL V+RPHPRWSEQ+PADWW ATC TV KLR Sbjct: 1 MYLGIDLGTSEVKAVVIDAQGSLVALAGSTLNVARPHPRWSEQAPADWWQATCDTVAKLR 60 Query: 71 EQLGSERFGRIRAIGLSGQMHGAVLMDAQDAVLRPAILWSDSRSAPECAELERRAPRLHG 130 QLGSERFG IRAIGLSGQMHGAVL+D +D VLRPAILWSDSRSAPECAELE RAPRLHG Sbjct: 61 TQLGSERFGSIRAIGLSGQMHGAVLLDERDEVLRPAILWSDSRSAPECAELESRAPRLHG 120 Query: 131 IAGNLAMPGFTAPKLLWVARHEPQLFARIATVLLPKDWLRFMMTGRKVCDPSDAAGTLWL 190 IAGNLAMPGFTAPKLLWVARHEPQLFARIATVLLPKDWLR MTGRKV DPSDAAGTLWL Sbjct: 121 IAGNLAMPGFTAPKLLWVARHEPQLFARIATVLLPKDWLRLKMTGRKVSDPSDAAGTLWL 180 Query: 191 DVEGRNWSDELLAASGMRRDQMPALVDGSAVSGTLLPEVAQAWGLRADVIVAGGAGDGAA 250 DVEGRNWSDELLAASGMRRDQMPALVDGSAVSG+LLPEVAQAWGLR+DVIVAGGAGDGAA Sbjct: 181 DVEGRNWSDELLAASGMRRDQMPALVDGSAVSGSLLPEVAQAWGLRSDVIVAGGAGDGAA 240 Query: 251 SAVGIGAVKPGDGFLSLGTSGVLFVVNDRFRPNPGRAIHAFCHTLPQRWHQMSVMLSAAS 310 SAVGIGAVKPGDGFLSLGTSGVLFVVNDRFRPNPGRAIHAFCHTLPQRWHQMSVMLSAAS Sbjct: 241 SAVGIGAVKPGDGFLSLGTSGVLFVVNDRFRPNPGRAIHAFCHTLPQRWHQMSVMLSAAS 300 Query: 311 CLRWFCRLCSVDEKSLLAEIEQLDEEARNNAPLFLPYLSGERTPHNDPYATGVFHGLTPE 370 CLRWFCRLCSVDEKSLLAEIEQLDE+A NNAPLFLPYLSGERTPHNDPYATGVFHGLTPE Sbjct: 301 CLRWFCRLCSVDEKSLLAEIEQLDEQACNNAPLFLPYLSGERTPHNDPYATGVFHGLTPE 360 Query: 371 HQRAALGYAVLEGVAFGMVDGLDALRAAGTDVAELSLVGGGARSAYWAQLLADALQVRIV 430 HQRAALGYAVLEGVAFGMVDGLDALRAAGTDVAELSLVGGGARSAYWAQLLADALQVRIV Sbjct: 361 HQRAALGYAVLEGVAFGMVDGLDALRAAGTDVAELSLVGGGARSAYWAQLLADALQVRIV 420 Query: 431 THVGSEAGGALGAARLAWLADGGDEAEVCRKPAQQALYQPDAARHAALQVRLQRYRAIYA 490 THVGSEAGGALGAARLAWLADGGDEAEVCRKPAQQALYQPD ARHAALQ RLQRYRAIYA Sbjct: 421 THVGSEAGGALGAARLAWLADGGDEAEVCRKPAQQALYQPDPARHAALQARLQRYRAIYA 480 Query: 491 PFAPLQGE 498 PFAPL GE Sbjct: 481 PFAPLHGE 488 >ref|YP_004751751.1| xylulose kinase [Collimonas fungivorans Ter331] gb|AEK60928.1| Xylulose kinase [Collimonas fungivorans Ter331] Length = 496 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 353/482 (73%), Positives = 388/482 (80%), Gaps = 4/482 (0%) Query: 11 MYLGIDLGTSEVKAVVIDETGALLALAGSTLTVSRPHPRWSEQSPADWWLATCATVDKLR 70 MYLGIDLGTSEVK V++D+ G LLA AGS LTVSRP PRWSEQ P WW AT + KLR Sbjct: 1 MYLGIDLGTSEVKIVLMDQAGKLLADAGSALTVSRPQPRWSEQDPEQWWQATGEAIAKLR 60 Query: 71 EQLGSERFGRIRAIGLSGQMHGAVLMDAQDAVLRPAILWSDSRSAPECAELERRAPRLHG 130 + +E F +RAIGLSGQMHGAV++ AQD VLRPAILW+D RS EC EL RAP+LH Sbjct: 61 AKAPAE-FRAVRAIGLSGQMHGAVVLGAQDRVLRPAILWNDLRSISECVELTERAPQLHQ 119 Query: 131 IAGNLAMPGFTAPKLLWVARHEPQLFARIATVLLPKDWLRFMMTGRKVCDPSDAAGTLWL 190 IAGNLAMPGFTAPKLLW+A HEP +FA + VLLPKDWLR +TG KV +PSDAAGTLWL Sbjct: 120 IAGNLAMPGFTAPKLLWLAHHEPDVFAAMQMVLLPKDWLRLKLTGNKVSEPSDAAGTLWL 179 Query: 191 DVEGRNWSDELLAASGMRRDQMPALVDGSAVSGTLLPEVAQAWGLRADVIVAGGAGDGAA 250 DV R+WSDELL A+GMRR MP LV+G SGTLLPEVA AWGL +VIVAGG GDGAA Sbjct: 180 DVAKRDWSDELLTATGMRRSHMPRLVEGGESSGTLLPEVASAWGLSPEVIVAGGGGDGAA 239 Query: 251 SAVGIGAVKPGDGFLSLGTSGVLFVVNDRFRPNPGRAIHAFCHTLPQRWHQMSVMLSAAS 310 SAVGIGAV PGDGF+SLGTSGVLFVVNDRFRPNP +A+HAFCH LP RWHQMSVMLSAAS Sbjct: 240 SAVGIGAVNPGDGFVSLGTSGVLFVVNDRFRPNPAQAVHAFCHALPGRWHQMSVMLSAAS 299 Query: 311 CLRWFCRLCSVDEKSLLAEIEQLDEEARNNAPLFLPYLSGERTPHNDPYATGVFHGLTPE 370 CLRWFCRL SVDE +LL EI +LD A NAPLFLPYLSGERTPHNDPYA GVFHGL+ Sbjct: 300 CLRWFCRLVSVDEATLLNEIAELDSAALENAPLFLPYLSGERTPHNDPYAQGVFHGLSHA 359 Query: 371 HQRAALGYAVLEGVAFGMVDGLDALRAAGTDVAELSLVGGGARSAYWAQLLADALQVRIV 430 H RAALGYAV+EGV FGM DGL AL AGT+V ELSLVGGG+RS YWAQL+ADAL VR+V Sbjct: 360 HGRAALGYAVIEGVTFGMADGLAALHTAGTEVTELSLVGGGSRSPYWAQLIADALNVRMV 419 Query: 431 THVGSEAGGALGAARLAWLADG---GDEAEVCRKPAQQALYQPDAARHAALQVRLQRYRA 487 THVGSE GGALGAARLAWLA G EA +C KP + + P+A RHAALQ RL YR Sbjct: 420 THVGSETGGALGAARLAWLAANDQPGKEAVICAKPPLREAFTPNAQRHAALQPRLAAYRE 479 Query: 488 IY 489 IY Sbjct: 480 IY 481 >ref|YP_003908068.1| xylulokinase [Burkholderia sp. CCGE1003] gb|ADN58777.1| xylulokinase [Burkholderia sp. CCGE1003] Length = 493 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 325/485 (67%), Positives = 366/485 (75%), Gaps = 1/485 (0%) Query: 11 MYLGIDLGTSEVKAVVIDETGALLALAGSTLTVSRPHPRWSEQSPADWWLATCATVDKLR 70 MYLGIDLGTSEVK +++ TG ++ AGS TVSRPH RW+EQ+P DWW T + + LR Sbjct: 1 MYLGIDLGTSEVKVLLLAPTGRVIGTAGSPFTVSRPHQRWAEQNPEDWWAGTRSALAALR 60 Query: 71 EQLGSERFGRIRAIGLSGQMHGAVLMDAQDAVLRPAILWSDSRSAPECAELERRAPRLHG 130 + E F +IR IGLSGQMHGAVL+DA++ VLRPAILW+D RS ECAEL RAP LH Sbjct: 61 AKHPDE-FAQIRGIGLSGQMHGAVLLDAENRVLRPAILWNDMRSDKECAELTERAPELHS 119 Query: 131 IAGNLAMPGFTAPKLLWVARHEPQLFARIATVLLPKDWLRFMMTGRKVCDPSDAAGTLWL 190 +AGNLAMPGFTAPKLLWVARHEP +FAR A VLLPKD+LR +TG KV DPSDAAGTLWL Sbjct: 120 VAGNLAMPGFTAPKLLWVARHEPDIFARTACVLLPKDYLRLQLTGGKVSDPSDAAGTLWL 179 Query: 191 DVEGRNWSDELLAASGMRRDQMPALVDGSAVSGTLLPEVAQAWGLRADVIVAGGAGDGAA 250 DV R+WSD LLAA M R QMP L +GSA SGTLLP++A+ WGL VIVA G GD A Sbjct: 180 DVAKRDWSDSLLAACNMTRAQMPGLAEGSAPSGTLLPQLAREWGLSDGVIVAAGGGDNAT 239 Query: 251 SAVGIGAVKPGDGFLSLGTSGVLFVVNDRFRPNPGRAIHAFCHTLPQRWHQMSVMLSAAS 310 SA+GIGA +PGDGF+SLGTSGVL VV D FRPNP A+HAFCH +P RWHQMSV+LSAAS Sbjct: 240 SAIGIGATQPGDGFVSLGTSGVLCVVGDSFRPNPASAVHAFCHAIPDRWHQMSVVLSAAS 299 Query: 311 CLRWFCRLCSVDEKSLLAEIEQLDEEARNNAPLFLPYLSGERTPHNDPYATGVFHGLTPE 370 CLRW C+L S DE +LLAEIE L EEA N APLFLPYLSGERTPHNDPYA GVF G+ Sbjct: 300 CLRWVCKLTSTDEPTLLAEIEALPEEALNTAPLFLPYLSGERTPHNDPYAQGVFFGMNHA 359 Query: 371 HQRAALGYAVLEGVAFGMVDGLDALRAAGTDVAELSLVGGGARSAYWAQLLADALQVRIV 430 RA LGYAVLEGV + DGLDALRAAGT+ LSL+GGGARS YWAQLLADAL Sbjct: 360 TDRALLGYAVLEGVTLALTDGLDALRAAGTEAKALSLLGGGARSDYWAQLLADALDTATR 419 Query: 431 THVGSEAGGALGAARLAWLADGGDEAEVCRKPAQQALYQPDAARHAALQVRLQRYRAIYA 490 H G E G ALGAARL WLA GGD A V KP + + P+ RHA L+ RL YRA+Y Sbjct: 420 KHGGGETGAALGAARLGWLAAGGDPATVLTKPPIEKEFTPNPRRHAQLRARLDAYRALYR 479 Query: 491 PFAPL 495 PL Sbjct: 480 HVRPL 484 >ref|ZP_03268003.1| xylulokinase [Burkholderia sp. H160] gb|EEA00407.1| xylulokinase [Burkholderia sp. H160] Length = 493 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 325/485 (67%), Positives = 367/485 (75%), Gaps = 1/485 (0%) Query: 11 MYLGIDLGTSEVKAVVIDETGALLALAGSTLTVSRPHPRWSEQSPADWWLATCATVDKLR 70 MYLGIDLGTSEVK +++ G ++ AGS TVSRPH RWSEQ+P DWW T + LR Sbjct: 1 MYLGIDLGTSEVKVLLLASDGRVIGTAGSPFTVSRPHQRWSEQNPEDWWAGTRTALAALR 60 Query: 71 EQLGSERFGRIRAIGLSGQMHGAVLMDAQDAVLRPAILWSDSRSAPECAELERRAPRLHG 130 + E F +IR IGLSGQMHGAVL+DA++ VLRPAILW+D RS ECAEL RAP LH Sbjct: 61 ARHPDE-FAQIRGIGLSGQMHGAVLLDAENRVLRPAILWNDMRSDKECAELTERAPELHR 119 Query: 131 IAGNLAMPGFTAPKLLWVARHEPQLFARIATVLLPKDWLRFMMTGRKVCDPSDAAGTLWL 190 +AGNLAMPGFTAPKLLWVARHEP +FA+ A VLLPKD+LR +TG KV DPSDAAGTLWL Sbjct: 120 VAGNLAMPGFTAPKLLWVARHEPDIFAKTACVLLPKDYLRLQLTGGKVSDPSDAAGTLWL 179 Query: 191 DVEGRNWSDELLAASGMRRDQMPALVDGSAVSGTLLPEVAQAWGLRADVIVAGGAGDGAA 250 DV R+WSD LLAA M R QMPAL +GSA +GTLLPEVA+ +GL VIVA G GD A Sbjct: 180 DVAKRDWSDSLLAACNMTRAQMPALREGSAPAGTLLPEVAREFGLSETVIVAAGGGDNAT 239 Query: 251 SAVGIGAVKPGDGFLSLGTSGVLFVVNDRFRPNPGRAIHAFCHTLPQRWHQMSVMLSAAS 310 SA+GIGA +PGDGF+SLGTSGVL VV D FRPNP A+HAFCH +P RWHQMSV+LSAAS Sbjct: 240 SAIGIGATQPGDGFVSLGTSGVLCVVGDSFRPNPASAVHAFCHAIPDRWHQMSVVLSAAS 299 Query: 311 CLRWFCRLCSVDEKSLLAEIEQLDEEARNNAPLFLPYLSGERTPHNDPYATGVFHGLTPE 370 CLRW C+L S DE +LLAEIE L EA APLFLPYLSGERTPHNDPYA GVF G+T Sbjct: 300 CLRWVCKLTSTDEPTLLAEIEALPAEALTTAPLFLPYLSGERTPHNDPYAQGVFFGMTHA 359 Query: 371 HQRAALGYAVLEGVAFGMVDGLDALRAAGTDVAELSLVGGGARSAYWAQLLADALQVRIV 430 RA LGYAVLEGV + DGLDALRAAGT+ ELSL+GGGARS YWAQLLADAL V Sbjct: 360 TDRALLGYAVLEGVTLALTDGLDALRAAGTEAKELSLLGGGARSDYWAQLLADALDTVTV 419 Query: 431 THVGSEAGGALGAARLAWLADGGDEAEVCRKPAQQALYQPDAARHAALQVRLQRYRAIYA 490 H G E G ALGAARL WLA GG A V KP+ + + P+ RHA L+ RL+ YRA+Y Sbjct: 420 KHGGGETGAALGAARLGWLAAGGAPATVLTKPSVEKEFTPNPRRHAQLRTRLEAYRALYR 479 Query: 491 PFAPL 495 PL Sbjct: 480 HVRPL 484 >ref|YP_003606060.1| xylulokinase [Burkholderia sp. CCGE1002] gb|ADG16549.1| xylulokinase [Burkholderia sp. CCGE1002] Length = 493 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 323/485 (66%), Positives = 369/485 (76%), Gaps = 1/485 (0%) Query: 11 MYLGIDLGTSEVKAVVIDETGALLALAGSTLTVSRPHPRWSEQSPADWWLATCATVDKLR 70 MYLGIDLGTSEVK +++ G ++ AGS TVSRPH RW+EQ+P DWW T + LR Sbjct: 1 MYLGIDLGTSEVKVLLLAPDGRVIGTAGSPFTVSRPHQRWAEQNPEDWWAGTRTALAALR 60 Query: 71 EQLGSERFGRIRAIGLSGQMHGAVLMDAQDAVLRPAILWSDSRSAPECAELERRAPRLHG 130 + E F +IR IGLSGQMHGAVL+DA++ VLRPAILW+D RS ECAEL RAP LH Sbjct: 61 ARHPDE-FAQIRGIGLSGQMHGAVLLDAENRVLRPAILWNDMRSDKECAELTERAPDLHS 119 Query: 131 IAGNLAMPGFTAPKLLWVARHEPQLFARIATVLLPKDWLRFMMTGRKVCDPSDAAGTLWL 190 +AGNLAMPGFTAPKLLWVARHEP++FAR A VLLPKD+LR +TG KV DPSDAAGTLWL Sbjct: 120 VAGNLAMPGFTAPKLLWVARHEPEIFARTACVLLPKDYLRLQLTGGKVSDPSDAAGTLWL 179 Query: 191 DVEGRNWSDELLAASGMRRDQMPALVDGSAVSGTLLPEVAQAWGLRADVIVAGGAGDGAA 250 DV R+WSD LLAA M+R QMP L +GSA +G LLPE+A+ +GLR DVIVA G GD A Sbjct: 180 DVAKRDWSDSLLAACNMKRAQMPVLREGSAPAGALLPELAREFGLRDDVIVAAGGGDNAT 239 Query: 251 SAVGIGAVKPGDGFLSLGTSGVLFVVNDRFRPNPGRAIHAFCHTLPQRWHQMSVMLSAAS 310 SA+GIGA +PGDGF+SLGTSGVL VV D FRPNP A+HAFCH +P RWHQMSV+LSAAS Sbjct: 240 SAIGIGATQPGDGFVSLGTSGVLCVVGDSFRPNPASAVHAFCHAIPDRWHQMSVVLSAAS 299 Query: 311 CLRWFCRLCSVDEKSLLAEIEQLDEEARNNAPLFLPYLSGERTPHNDPYATGVFHGLTPE 370 CLRW C+L S DE +LLAEIE L EA +APLFLPYLSGERTPHNDPYA GVF G+T Sbjct: 300 CLRWVCKLTSTDEPTLLAEIEALPAEALTSAPLFLPYLSGERTPHNDPYAQGVFFGMTHA 359 Query: 371 HQRAALGYAVLEGVAFGMVDGLDALRAAGTDVAELSLVGGGARSAYWAQLLADALQVRIV 430 RA LGYAVLEGV + DGLDALRAAGT+ LSL+GGGARS YWAQLLADAL V Sbjct: 360 TDRALLGYAVLEGVTLALTDGLDALRAAGTEAKVLSLLGGGARSDYWAQLLADALDTVTV 419 Query: 431 THVGSEAGGALGAARLAWLADGGDEAEVCRKPAQQALYQPDAARHAALQVRLQRYRAIYA 490 H G E G ALGAARL WLA GG+ A V KP + + P+ RHA L+ RL+ YRA+Y Sbjct: 420 KHGGGETGAALGAARLGWLAAGGEPATVLTKPPVEKEFTPNPRRHAELRTRLEAYRALYR 479 Query: 491 PFAPL 495 PL Sbjct: 480 HVRPL 484