BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0649.p         (157 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773884.1| hypothetical protein Hsero_0451 [Herbaspiril...   154   4e-36
ref|YP_004751382.1| hypothetical protein CFU_0725 [Collimonas fu...    68   4e-10
ref|ZP_08272692.1| hypothetical protein IMCC9480_1593 [Oxalobact...    65   3e-09
ref|ZP_04577658.1| predicted protein [Oxalobacter formigenes HOx...    64   1e-08
ref|YP_001098625.1| hypothetical protein HEAR0268 [Herminiimonas...    63   2e-08

>ref|YP_003773884.1| hypothetical protein Hsero_0451 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61976.1| hypothetical protein Hsero_0451 [Herbaspirillum seropedicae SmR1]
          Length = 146

 Score =  154 bits (389), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 125/146 (85%), Positives = 132/146 (90%), Gaps = 1/146 (0%)

Query: 13  MKPSQLRFKESLAALLLCASAGLAAPLALAQTPPAGLAAQPAPPPPELEKLEEGEPPAVT 72
           MKPSQ  FKESLAA+LLCASAGLAAPLALAQ  PAG+AAQPAPPPPELEKLEEGEPPAVT
Sbjct: 1   MKPSQPWFKESLAAVLLCASAGLAAPLALAQPAPAGVAAQPAPPPPELEKLEEGEPPAVT 60

Query: 73  IRKPGEDSRTQGNSIKERRDHGQTKEIEVKSGPSTYYVRPNPQLGGSTPGDAQSPPPSSA 132
           IRKPGEDSR QGNSIKE+RDHGQ KEIEVKSGPSTYY+RPN  +G STPGDAQS PP+SA
Sbjct: 61  IRKPGEDSRNQGNSIKEQRDHGQVKEIEVKSGPSTYYLRPNQNVGSSTPGDAQSGPPTSA 120

Query: 133 QWKVGEFDWGVKKP-QEGDTDGTTKK 157
           QWKVGEFDWGVKKP QEG T+G  KK
Sbjct: 121 QWKVGEFDWGVKKPQQEGQTEGAAKK 146


>ref|YP_004751382.1| hypothetical protein CFU_0725 [Collimonas fungivorans Ter331]
 gb|AEK60559.1| hypothetical protein CFU_0725 [Collimonas fungivorans Ter331]
          Length = 145

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 7/130 (5%)

Query: 21  KESLAALLLCASAGLAAPLALAQTPPAGLAAQPAPPPPELEKLEEGEPPAVTIRKPGEDS 80
           K  +  LL      LA PL +        +   APPPPEL+KLEEGE PA TIRKPG++ 
Sbjct: 3   KSQVWQLLAAGIVSLATPLLVNAQQAPQPSKSAAPPPPELQKLEEGEAPAATIRKPGDEP 62

Query: 81  RTQGNSIKERRDHGQTKEIEVKSGPSTYYVRPNPQLGGSTPGDAQSPPPSSAQWKVGEFD 140
                 I ++R+ G+  E++V+SG STYYV+P  Q G   PGD+    P  AQW++ EFD
Sbjct: 63  A----GITQKREQGRVSEVKVESGGSTYYVKPGSQAGTLQPGDS---IPRGAQWQIKEFD 115

Query: 141 WGVKKPQEGD 150
            G K  + G+
Sbjct: 116 LGQKARKPGE 125


>ref|ZP_08272692.1| hypothetical protein IMCC9480_1593 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33834.1| hypothetical protein IMCC9480_1593 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 166

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 13/125 (10%)

Query: 27  LLLCASAGLAAPLALAQTPPAGLAAQPAPPPPELEKLEEGEPPAVTIRKPGEDSRTQGNS 86
            +LC +A +   LA AQ+     A      PP LE+LEEG  P +TI      S  Q ++
Sbjct: 38  FILCVAASVTPLLAQAQSATVNQA------PPNLERLEEGSAPDITI------SPQQRST 85

Query: 87  IKERRDHGQTKEIEVKSGPSTYYVRPNPQLGGSTPGDAQSPPPSSAQWKVGEFDWGVKK- 145
             ++R+ G   E++V+SG S Y V+ +   G + PGDAQS    + QW V EFDWG KK 
Sbjct: 86  TTDKREQGVVTEVQVQSGGSNYRVKQSAGPGNAAPGDAQSNAVRAPQWLVKEFDWGGKKE 145

Query: 146 PQEGD 150
           P+ G+
Sbjct: 146 PKPGE 150


>ref|ZP_04577658.1| predicted protein [Oxalobacter formigenes HOxBLS]
 gb|EEO28620.1| predicted protein [Oxalobacter formigenes HOxBLS]
          Length = 137

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 9/118 (7%)

Query: 40  ALAQTPPA-GLAAQPAPPPPELEKLEEGEPPAVTIRKPGEDSRTQGNSIKERRDHGQTKE 98
           ALA T  A G   Q +P   ELE ++E + PA+TIRKP          I E+R  G  +E
Sbjct: 15  ALAVTSVAVGQDVQQSPQVQELEIIDEVDQPAITIRKP-----DMTGEITEKRQGGIVEE 69

Query: 99  IEVKSGPSTYYVRPNPQLGGSTPGDAQSPPPSSAQWKVGEFDWGVKKPQEGDTDGTTK 156
           I+VKSGPSTYY+ PN   G   PG  +S     A W+V EFD G  K Q+G  + T +
Sbjct: 70  IKVKSGPSTYYLFPNGPNG--VPGSFESSEVRPALWRVHEFDIGESK-QDGKKEETAE 124


>ref|YP_001098625.1| hypothetical protein HEAR0268 [Herminiimonas arsenicoxydans]
 emb|CAL60496.1| Hypothetical protein HEAR0268 [Herminiimonas arsenicoxydans]
          Length = 136

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 8/117 (6%)

Query: 24  LAALLLCASAGLAAPL-ALAQTPPAGLAAQPAPPPPELEKLEEGEPPAVTIRKPGEDSRT 82
           L +L+  ++A +A PL A AQ+ P   A  PAPP  ++E+LEEGE PAVTIR+P    + 
Sbjct: 6   LWSLVTISAAAIAMPLIASAQSTPQNKAFAPAPP--QMERLEEGEAPAVTIRQPDTQKK- 62

Query: 83  QGNSIKERRDHGQTKEIEVKSGPSTYYVRPNPQLGGSTPGDAQSPPPSSAQWKVGEF 139
               I E++  G+  E++V++G +TYY +PN   G +  GD QS      Q+++GEF
Sbjct: 63  ----ITEKKSQGKVTEVKVQTGTTTYYAKPNDPAGSAMRGDGQSDTTRPVQFQIGEF 115