BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0646.p (986 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773887.1| DNA polymerase I protein [Herbaspirillum ser... 1748 0.0 ref|YP_004751383.1| DNA polymerase I [Collimonas fungivorans Ter... 1519 0.0 emb|CAL60497.2| DNA polymerase I (POL I) [Herminiimonas arsenico... 1437 0.0 ref|YP_001098626.1| DNA polymerase I (POL I) [Herminiimonas arse... 1437 0.0 ref|YP_001352013.1| DNA polymerase I [Janthinobacterium sp. Mars... 1418 0.0 >ref|YP_003773887.1| DNA polymerase I protein [Herbaspirillum seropedicae SmR1] gb|ADJ61979.1| DNA polymerase I protein [Herbaspirillum seropedicae SmR1] Length = 920 Score = 1748 bits (4527), Expect = 0.0, Method: Composition-based stats. Identities = 871/920 (94%), Positives = 899/920 (97%) Query: 67 MQKTLLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDA 126 MQKTLLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDA Sbjct: 1 MQKTLLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDA 60 Query: 127 KGKTFRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQ 186 KGKTFRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQ Sbjct: 61 KGKTFRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQ 120 Query: 187 ATAAGLNTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIG 246 ATAAGL+TIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIG Sbjct: 121 ATAAGLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIG 180 Query: 247 DTVDNVPGVEKCGPKTAVKWLSAYGSLDGVMANADKITGVVGENLRKALDWLPQGRVLVT 306 DTVDNVPGVEKCGPKTAVKWL+AYG+LDGVMANADKI+GVVGENLR+ALDWLPQGRVLVT Sbjct: 181 DTVDNVPGVEKCGPKTAVKWLTAYGTLDGVMANADKISGVVGENLRRALDWLPQGRVLVT 240 Query: 307 VKTDCDLSEHMKSILESLTMQPVDKEVLKDLFTRYNFRTWLRELGEGSEPASAKAPLVGA 366 VKTDCDLS HM SILESLTMQP DK+VLK+LFTRYNFRTWLREL +G+E ++KAP+VGA Sbjct: 241 VKTDCDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGA 300 Query: 367 SAAAALEAPAQGGLFAPAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLDAMQAE 426 SAAAALEAPAQGGLFA APKVEYETVLTDAQLDQWIATINAAELTAVDTETTSL+AMQAE Sbjct: 301 SAAAALEAPAQGGLFAAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLEAMQAE 360 Query: 427 LVGISLCCEPGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDASKPKLGQHLKYDSHI 486 LVGISLCCEPGRAAYIPVAHNYQD P QL R+ VL KLKPWLEDASKPKLGQHLKYDSHI Sbjct: 361 LVGISLCCEPGRAAYIPVAHNYQDAPVQLSRQHVLEKLKPWLEDASKPKLGQHLKYDSHI 420 Query: 487 FANYGVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNE 546 FANYGVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNE Sbjct: 421 FANYGVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNE 480 Query: 547 VAIERATEYAAEDAEVTLALHHAMWPQVEHDDKLRFIYEKIEVPTSVVLQKIERNGVLID 606 VAIERATEYAAEDAEVTLALH AMWPQ+EHDDKLRFIYEKIEVPTSVVLQKIERNGVLID Sbjct: 481 VAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQKIERNGVLID 540 Query: 607 SERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPS 666 SERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPS Sbjct: 541 SERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPS 600 Query: 667 TDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMINPASGRVHTNYAQAVAVTGR 726 TDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKM+NPA+GRVHTNYAQAVAVTGR Sbjct: 601 TDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGR 660 Query: 727 LSSNEPNLQNIPIRTPEGRRIREAFVAPEGCVIVSADYSQIELRIMAHISEDENMLKAFA 786 LSSN+PNLQNIPIRT EGRRIREAFVAPEG VIVSADYSQIELRIMAHISEDENMLKAFA Sbjct: 661 LSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISEDENMLKAFA 720 Query: 787 NNEDIHKATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLAGNLGIERSAAQMYI 846 NNEDIH+ATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLA NLGIER+AAQMYI Sbjct: 721 NNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQMYI 780 Query: 847 DKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM 906 DKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM Sbjct: 781 DKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM 840 Query: 907 QGTAADLIKLAMIAVQDWLESTGMKSRMIMQVHDELVLEVPQDELAVVREKLPELMKNVA 966 QGTAADLIK+AMIAVQDWLE+ +++RMIMQVHDELVLEVPQ EL +VREKLPELMKNVA Sbjct: 841 QGTAADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEMVREKLPELMKNVA 900 Query: 967 ELKVPLIAEVGAGKNWDQAH 986 ELKVPL+AEVG GKNWD+AH Sbjct: 901 ELKVPLLAEVGIGKNWDEAH 920 >ref|YP_004751383.1| DNA polymerase I [Collimonas fungivorans Ter331] gb|AEK60560.1| DNA polymerase I [Collimonas fungivorans Ter331] Length = 1165 Score = 1519 bits (3933), Expect = 0.0, Method: Composition-based stats. Identities = 766/990 (77%), Positives = 845/990 (85%), Gaps = 7/990 (0%) Query: 3 IVGLDPGRTEDGNGRTQLGETFGRFDEFCHNREYMPRLARLLGRRAFDVPHLPQTRDIFS 62 IV LD GR ED + R QLG+ FGR D+FCHNRE+MPR ARL G AFDV HLPQTR IFS Sbjct: 177 IVFLDAGRAEDRHRRMQLGKAFGRLDKFCHNREHMPRFARLFGSCAFDVRHLPQTRHIFS 236 Query: 63 SLFHMQKTLLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVAC 122 FHMQKTLLLVDGSSYLYRAFHALPDMRNA PTGA+YGIINMLRRLR DYP++Y+AC Sbjct: 237 VQFHMQKTLLLVDGSSYLYRAFHALPDMRNAANEPTGAMYGIINMLRRLRLDYPSAYLAC 296 Query: 123 VFDAKGKTFRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGT 182 VFDAKGKTFRDD+Y DYKATR SMPEDL QI PIHAAVRA+GWPILMVEG+EADDVIGT Sbjct: 297 VFDAKGKTFRDDMYADYKATRASMPEDLVKQITPIHAAVRAMGWPILMVEGVEADDVIGT 356 Query: 183 LSVQATAAGLNTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYL 242 L+VQA G+ IVSTGDKD+AQLVN++VTL+NTMSNE LD AGV AKFGVPPERIVDYL Sbjct: 357 LTVQAVTHGMQAIVSTGDKDLAQLVNDNVTLINTMSNETLDRAGVIAKFGVPPERIVDYL 416 Query: 243 SLIGDTVDNVPGVEKCGPKTAVKWLSAYGSLDGVMANADKITGVVGENLRKALDWLPQGR 302 +LIGDTVDN+PGV K GPKTAVKWL+ Y ++D V+A+A I G VGENLR+ LDWLP+ + Sbjct: 417 TLIGDTVDNIPGVAKVGPKTAVKWLAQYDTVDQVIAHAADIGGAVGENLRQVLDWLPKAK 476 Query: 303 VLVTVKTDCDLSEHMKSILESLTMQPVDKEVLKDLFTRYNFRTWLREL---GEGSEPASA 359 LVTVKTDCDLS HM SI ESL DKE L +LFTRYNF+TWLREL G + A A Sbjct: 477 ELVTVKTDCDLSAHMVSIPESLKAPEQDKETLIELFTRYNFKTWLRELSVAGNAAGTAEA 536 Query: 360 KAPLVGASAAAALEAPAQGGLFAP-APKVE--YETVLTDAQLDQWIATINAAELTAVDTE 416 P S A E PAQ LFA A VE YETVLT+AQLDQW+ I+ A LTAVDTE Sbjct: 537 GKPAAAGSNTGAAE-PAQSSLFAATAAPVERLYETVLTEAQLDQWLQRIDKASLTAVDTE 595 Query: 417 TTSLDAMQAELVGISLCCEPGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDASKPKL 476 TTSLD M A+LVGISLCCE G AAYIPVAH YQD PAQLPRE VL K++ WLED SKPK+ Sbjct: 596 TTSLDPMTAQLVGISLCCEVGVAAYIPVAHRYQDAPAQLPREFVLEKMRAWLEDESKPKV 655 Query: 477 GQHLKYDSHIFANYGVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCG 536 GQ+LKYDSHIFAN GV L G+ HDTLLESYVFESHR HDMDSLA RHL +TIT+ EVCG Sbjct: 656 GQNLKYDSHIFANQGVSLRGIVHDTLLESYVFESHRSHDMDSLALRHLNHQTITFQEVCG 715 Query: 537 KGASQIGFNEVAIERATEYAAEDAEVTLALHHAMWPQVEHDDKLRFIYEKIEVPTSVVLQ 596 KGASQIGF+EV I RA EYAAEDA++TL LH MWP + D KLRFIYEKIEVPTSVVLQ Sbjct: 716 KGASQIGFDEVEIGRAAEYAAEDADITLQLHLTMWPHIADDAKLRFIYEKIEVPTSVVLQ 775 Query: 597 KIERNGVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPV 656 KIERNGVLID+ L QS++LGKRMLEIEQ AY+LAGQPFNL+SPKQLGEILF KL+LPV Sbjct: 776 KIERNGVLIDASLLATQSNELGKRMLEIEQLAYELAGQPFNLSSPKQLGEILFDKLKLPV 835 Query: 657 VKKTASGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMINPASGRVHTN 716 VKKT SG+PSTDEEVLQKLAEDYPLPKVLLDYR L+KLKSTYTDKLPKM+NP +GRVHTN Sbjct: 836 VKKTPSGSPSTDEEVLQKLAEDYPLPKVLLDYRSLSKLKSTYTDKLPKMVNPHTGRVHTN 895 Query: 717 YAQAVAVTGRLSSNEPNLQNIPIRTPEGRRIREAFVAPEGCVIVSADYSQIELRIMAHIS 776 YAQAVAVTGRL+SN+PNLQNIPIRT EGRRIREAFVAP VIVSADYSQIELRIMAHIS Sbjct: 896 YAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFVAPPDSVIVSADYSQIELRIMAHIS 955 Query: 777 EDENMLKAFANNEDIHKATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLAGNLG 836 DENML+AFA DIH+ATAAEIFG +V SEQRRYAKVINFGLIYGMSAFGLAGNLG Sbjct: 956 GDENMLRAFAEGVDIHRATAAEIFGTPAAEVTSEQRRYAKVINFGLIYGMSAFGLAGNLG 1015 Query: 837 IERSAAQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQG 896 IER+AAQMYI+KYFMRF+GVK++MD TR++AK++GYVETVFGRRLWLPEINSPNG RRQG Sbjct: 1016 IERAAAQMYIEKYFMRFAGVKQFMDMTRVEAKSQGYVETVFGRRLWLPEINSPNGQRRQG 1075 Query: 897 AERAAINAPMQGTAADLIKLAMIAVQDWLESTGMKSRMIMQVHDELVLEVPQDELAVVRE 956 AERAAINAPMQGTAADLIKL+MIAVQ W+E+ +KS+M+MQVHDELVLEVPQDELA+VRE Sbjct: 1076 AERAAINAPMQGTAADLIKLSMIAVQGWIETERLKSKMVMQVHDELVLEVPQDELALVRE 1135 Query: 957 KLPELMKNVAELKVPLIAEVGAGKNWDQAH 986 +LP+LM VAELKVPLIAEVG GKNWD+AH Sbjct: 1136 RLPQLMAGVAELKVPLIAEVGVGKNWDEAH 1165 >emb|CAL60497.2| DNA polymerase I (POL I) [Herminiimonas arsenicoxydans] Length = 917 Score = 1437 bits (3720), Expect = 0.0, Method: Composition-based stats. Identities = 711/925 (76%), Positives = 800/925 (86%), Gaps = 19/925 (2%) Query: 67 MQKTLLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYP-ASYVACVFD 125 M KTLLLVDGSSYLYRAFHA+PD+R EGAPTGA+YG+INMLRRLR DYP A Y+ACVFD Sbjct: 7 MNKTLLLVDGSSYLYRAFHAMPDLRGPEGAPTGAIYGMINMLRRLRKDYPDAEYMACVFD 66 Query: 126 AKGKTFRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSV 185 AKGKTFRDDLY +YKA R SMP+DL QIEPIH AVRA+GWPILMV+GIEADDVI TL+V Sbjct: 67 AKGKTFRDDLYAEYKAQRASMPDDLVRQIEPIHEAVRAMGWPILMVDGIEADDVIATLAV 126 Query: 186 QATAAGLNTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLI 245 A G+NT++STGDKD+AQLVNEHVTLVNTMS E+LD GV AKFGVPPERIVDYL+L+ Sbjct: 127 AAVGHGINTVISTGDKDLAQLVNEHVTLVNTMSGEILDRDGVLAKFGVPPERIVDYLTLV 186 Query: 246 GDTVDNVPGVEKCGPKTAVKWLSAYGSLDGVMANADKITGVVGENLRKALDWLPQGRVLV 305 GDTVDNVPGVEK GPKTAVKWL+ YG+LDG++A+A +I GVVGENLR+ALDWLPQ +VL+ Sbjct: 187 GDTVDNVPGVEKVGPKTAVKWLTQYGTLDGIVAHAAEIKGVVGENLRRALDWLPQAKVLI 246 Query: 306 TVKTDCDLSEHMKSILESLTMQPVDKEVLKDLFTRYNFRTWLRELGEGSE-PASAKAPLV 364 TVKTDCDLS HM I ESLT + D E + F R F++WLREL E +E PASA AP Sbjct: 247 TVKTDCDLSAHMTEIPESLTQKTEDIEAMVAFFKRNGFKSWLRELTEKTEMPASATAP-- 304 Query: 365 GASAAAALEAPAQGGLFAP-APKVE--YETVLTDAQLDQWIATINAAELTAVDTETTSLD 421 QG LF P+VE YETV T+A LD+W+ INAAELTA+DTETTSL+ Sbjct: 305 ------------QGALFGEDTPEVEKHYETVWTEANLDRWLQKINAAELTAIDTETTSLE 352 Query: 422 AMQAELVGISLCCEPGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDASKPKLGQHLK 481 MQA+LVGISLCCEPG AAYIPVAH YQD+P QL R VL KL+ WLED SKPK+GQ+LK Sbjct: 353 PMQAQLVGISLCCEPGVAAYIPVAHRYQDVPLQLSRASVLEKLRSWLEDDSKPKVGQNLK 412 Query: 482 YDSHIFANYGVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQ 541 YDSHIFAN+GV L G+ HDTLL+SYVFESHR HDMDSLA RHL RKT+T+ +VCGKGASQ Sbjct: 413 YDSHIFANHGVTLRGIVHDTLLQSYVFESHRSHDMDSLALRHLNRKTMTFQDVCGKGASQ 472 Query: 542 IGFNEVAIERATEYAAEDAEVTLALHHAMWPQVEHDDKLRFIYEKIEVPTSVVLQKIERN 601 + F++V I RATEYAAEDA++TL LH M+P V D L F+YEKIE+PT+VVLQK+ERN Sbjct: 473 LCFDQVDIARATEYAAEDADITLQLHQRMFPHVAEDAGLSFVYEKIELPTAVVLQKVERN 532 Query: 602 GVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTA 661 GVLID L QSH+LGKRMLEIEQQAY+LAGQPFNL SPKQ+GEI F K++LPVVKKT Sbjct: 533 GVLIDPGLLATQSHELGKRMLEIEQQAYELAGQPFNLGSPKQIGEIFFEKMKLPVVKKTP 592 Query: 662 SGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMINPASGRVHTNYAQAV 721 SG+PSTDEEVLQKLAEDYPLPK+LL+YRGL+KLKSTYTDKLPKMI+PA+GRVHTNYAQAV Sbjct: 593 SGSPSTDEEVLQKLAEDYPLPKLLLEYRGLSKLKSTYTDKLPKMIDPATGRVHTNYAQAV 652 Query: 722 AVTGRLSSNEPNLQNIPIRTPEGRRIREAFVAPEGCVIVSADYSQIELRIMAHISEDENM 781 AVTGRLSSN+PNLQNIPIR EGRRIREAF+AP G VIVSADYSQIELRIMAHISEDENM Sbjct: 653 AVTGRLSSNDPNLQNIPIRNAEGRRIREAFIAPPGSVIVSADYSQIELRIMAHISEDENM 712 Query: 782 LKAFANNEDIHKATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLAGNLGIERSA 841 L+AFA EDIH+ATAAEIFG+A V SEQRRYAKVINFGLIYGMSAFGLAGNLGIER+A Sbjct: 713 LRAFAEGEDIHRATAAEIFGVARGDVSSEQRRYAKVINFGLIYGMSAFGLAGNLGIERAA 772 Query: 842 AQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAA 901 AQ YI+KYF RFSGVKRYMD+TRL+AKARGYV+TVFGRRLWLPEINSPNGPRRQGAERAA Sbjct: 773 AQSYIEKYFYRFSGVKRYMDDTRLEAKARGYVQTVFGRRLWLPEINSPNGPRRQGAERAA 832 Query: 902 INAPMQGTAADLIKLAMIAVQDWLESTGMKSRMIMQVHDELVLEVPQDELAVVREKLPEL 961 INAPMQGTAADLIKLAMIAVQDWLE+ ++++MIMQVHDELVLEVP+ ELA+VR KLPEL Sbjct: 833 INAPMQGTAADLIKLAMIAVQDWLEAEKLQTKMIMQVHDELVLEVPETELALVRVKLPEL 892 Query: 962 MKNVAELKVPLIAEVGAGKNWDQAH 986 M+NVA+LKVPLIAEVG GKNWD+AH Sbjct: 893 MRNVAQLKVPLIAEVGVGKNWDEAH 917 >ref|YP_001098626.1| DNA polymerase I (POL I) [Herminiimonas arsenicoxydans] Length = 911 Score = 1437 bits (3720), Expect = 0.0, Method: Composition-based stats. Identities = 711/925 (76%), Positives = 800/925 (86%), Gaps = 19/925 (2%) Query: 67 MQKTLLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYP-ASYVACVFD 125 M KTLLLVDGSSYLYRAFHA+PD+R EGAPTGA+YG+INMLRRLR DYP A Y+ACVFD Sbjct: 1 MNKTLLLVDGSSYLYRAFHAMPDLRGPEGAPTGAIYGMINMLRRLRKDYPDAEYMACVFD 60 Query: 126 AKGKTFRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSV 185 AKGKTFRDDLY +YKA R SMP+DL QIEPIH AVRA+GWPILMV+GIEADDVI TL+V Sbjct: 61 AKGKTFRDDLYAEYKAQRASMPDDLVRQIEPIHEAVRAMGWPILMVDGIEADDVIATLAV 120 Query: 186 QATAAGLNTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLI 245 A G+NT++STGDKD+AQLVNEHVTLVNTMS E+LD GV AKFGVPPERIVDYL+L+ Sbjct: 121 AAVGHGINTVISTGDKDLAQLVNEHVTLVNTMSGEILDRDGVLAKFGVPPERIVDYLTLV 180 Query: 246 GDTVDNVPGVEKCGPKTAVKWLSAYGSLDGVMANADKITGVVGENLRKALDWLPQGRVLV 305 GDTVDNVPGVEK GPKTAVKWL+ YG+LDG++A+A +I GVVGENLR+ALDWLPQ +VL+ Sbjct: 181 GDTVDNVPGVEKVGPKTAVKWLTQYGTLDGIVAHAAEIKGVVGENLRRALDWLPQAKVLI 240 Query: 306 TVKTDCDLSEHMKSILESLTMQPVDKEVLKDLFTRYNFRTWLRELGEGSE-PASAKAPLV 364 TVKTDCDLS HM I ESLT + D E + F R F++WLREL E +E PASA AP Sbjct: 241 TVKTDCDLSAHMTEIPESLTQKTEDIEAMVAFFKRNGFKSWLRELTEKTEMPASATAP-- 298 Query: 365 GASAAAALEAPAQGGLFAP-APKVE--YETVLTDAQLDQWIATINAAELTAVDTETTSLD 421 QG LF P+VE YETV T+A LD+W+ INAAELTA+DTETTSL+ Sbjct: 299 ------------QGALFGEDTPEVEKHYETVWTEANLDRWLQKINAAELTAIDTETTSLE 346 Query: 422 AMQAELVGISLCCEPGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDASKPKLGQHLK 481 MQA+LVGISLCCEPG AAYIPVAH YQD+P QL R VL KL+ WLED SKPK+GQ+LK Sbjct: 347 PMQAQLVGISLCCEPGVAAYIPVAHRYQDVPLQLSRASVLEKLRSWLEDDSKPKVGQNLK 406 Query: 482 YDSHIFANYGVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQ 541 YDSHIFAN+GV L G+ HDTLL+SYVFESHR HDMDSLA RHL RKT+T+ +VCGKGASQ Sbjct: 407 YDSHIFANHGVTLRGIVHDTLLQSYVFESHRSHDMDSLALRHLNRKTMTFQDVCGKGASQ 466 Query: 542 IGFNEVAIERATEYAAEDAEVTLALHHAMWPQVEHDDKLRFIYEKIEVPTSVVLQKIERN 601 + F++V I RATEYAAEDA++TL LH M+P V D L F+YEKIE+PT+VVLQK+ERN Sbjct: 467 LCFDQVDIARATEYAAEDADITLQLHQRMFPHVAEDAGLSFVYEKIELPTAVVLQKVERN 526 Query: 602 GVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTA 661 GVLID L QSH+LGKRMLEIEQQAY+LAGQPFNL SPKQ+GEI F K++LPVVKKT Sbjct: 527 GVLIDPGLLATQSHELGKRMLEIEQQAYELAGQPFNLGSPKQIGEIFFEKMKLPVVKKTP 586 Query: 662 SGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMINPASGRVHTNYAQAV 721 SG+PSTDEEVLQKLAEDYPLPK+LL+YRGL+KLKSTYTDKLPKMI+PA+GRVHTNYAQAV Sbjct: 587 SGSPSTDEEVLQKLAEDYPLPKLLLEYRGLSKLKSTYTDKLPKMIDPATGRVHTNYAQAV 646 Query: 722 AVTGRLSSNEPNLQNIPIRTPEGRRIREAFVAPEGCVIVSADYSQIELRIMAHISEDENM 781 AVTGRLSSN+PNLQNIPIR EGRRIREAF+AP G VIVSADYSQIELRIMAHISEDENM Sbjct: 647 AVTGRLSSNDPNLQNIPIRNAEGRRIREAFIAPPGSVIVSADYSQIELRIMAHISEDENM 706 Query: 782 LKAFANNEDIHKATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLAGNLGIERSA 841 L+AFA EDIH+ATAAEIFG+A V SEQRRYAKVINFGLIYGMSAFGLAGNLGIER+A Sbjct: 707 LRAFAEGEDIHRATAAEIFGVARGDVSSEQRRYAKVINFGLIYGMSAFGLAGNLGIERAA 766 Query: 842 AQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAA 901 AQ YI+KYF RFSGVKRYMD+TRL+AKARGYV+TVFGRRLWLPEINSPNGPRRQGAERAA Sbjct: 767 AQSYIEKYFYRFSGVKRYMDDTRLEAKARGYVQTVFGRRLWLPEINSPNGPRRQGAERAA 826 Query: 902 INAPMQGTAADLIKLAMIAVQDWLESTGMKSRMIMQVHDELVLEVPQDELAVVREKLPEL 961 INAPMQGTAADLIKLAMIAVQDWLE+ ++++MIMQVHDELVLEVP+ ELA+VR KLPEL Sbjct: 827 INAPMQGTAADLIKLAMIAVQDWLEAEKLQTKMIMQVHDELVLEVPETELALVRVKLPEL 886 Query: 962 MKNVAELKVPLIAEVGAGKNWDQAH 986 M+NVA+LKVPLIAEVG GKNWD+AH Sbjct: 887 MRNVAQLKVPLIAEVGVGKNWDEAH 911 >ref|YP_001352013.1| DNA polymerase I [Janthinobacterium sp. Marseille] gb|ABR88976.1| DNA polymerase I [Janthinobacterium sp. Marseille] Length = 912 Score = 1418 bits (3671), Expect = 0.0, Method: Composition-based stats. Identities = 701/919 (76%), Positives = 802/919 (87%), Gaps = 11/919 (1%) Query: 72 LLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYP-ASYVACVFDAKGKT 130 +LVDGSSYLYRAFHA+PD+R GAPTGA+YG+INMLRRLR DYP A Y+ACVFDAKGKT Sbjct: 1 MLVDGSSYLYRAFHAMPDLRGPNGAPTGAIYGMINMLRRLRKDYPDAEYMACVFDAKGKT 60 Query: 131 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 190 FRDDLY +YKA R SMP+DL QIEPIH AVRA+GWPILMVEGIEADDVIGTL+V+A Sbjct: 61 FRDDLYAEYKAQRASMPDDLVKQIEPIHEAVRAMGWPILMVEGIEADDVIGTLAVEAVKH 120 Query: 191 GLNTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 250 G++T++STGDKD+AQLVN+ V L+NTMSNE LD GV AKFGVPPERI+DYL+LIGDTVD Sbjct: 121 GMDTVISTGDKDLAQLVNDRVMLINTMSNEKLDRDGVIAKFGVPPERIIDYLTLIGDTVD 180 Query: 251 NVPGVEKCGPKTAVKWLSAYGSLDGVMANADKITGVVGENLRKALDWLPQGRVLVTVKTD 310 NVPGV+K GPKTAVKWL+ YG+LDG++ +A I G VG+NLR+ALDWLPQ + L+TVKTD Sbjct: 181 NVPGVDKVGPKTAVKWLTQYGTLDGIVEHAADIKGAVGDNLRRALDWLPQAKTLITVKTD 240 Query: 311 CDLSEHMKSILESLTMQPVDKEVLKDLFTRYNFRTWLRELGEGSEPASAKAPLVGASAAA 370 CDLS HM +I+ESLT +P DK+ + D FTR F+TWLREL + E A A +AA Sbjct: 241 CDLSGHMDTIVESLTQRPEDKDAMIDFFTRNGFKTWLRELSDKPEAADA-------AAAP 293 Query: 371 ALEAPAQGGLFAP-APKVE--YETVLTDAQLDQWIATINAAELTAVDTETTSLDAMQAEL 427 A +A QG LFA AP+VE YET+LT+A+L++W+ I++A LT++DTETTSL MQA+L Sbjct: 294 AADAAPQGALFADDAPEVEKHYETILTEAELERWLQKIDSAVLTSIDTETTSLIPMQAQL 353 Query: 428 VGISLCCEPGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDASKPKLGQHLKYDSHIF 487 VGISLCCEPG AAYIPVAH+YQD+P QL RELVL K+KPWLEDASK K+GQ+LKYDSHIF Sbjct: 354 VGISLCCEPGVAAYIPVAHHYQDVPQQLSRELVLEKMKPWLEDASKAKVGQNLKYDSHIF 413 Query: 488 ANYGVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNEV 547 AN+GV L G+ HDTLLESYVFESHR HDMDSLA RHL RKTIT+ EVCGKGASQIGF +V Sbjct: 414 ANHGVNLRGIVHDTLLESYVFESHRSHDMDSLALRHLNRKTITFQEVCGKGASQIGFEQV 473 Query: 548 AIERATEYAAEDAEVTLALHHAMWPQVEHDDKLRFIYEKIEVPTSVVLQKIERNGVLIDS 607 I RATEYAAEDA++TL LH MWP V D+ L F+YEKIE+PT+VVLQKIERNGVLID Sbjct: 474 EIGRATEYAAEDADITLQLHQRMWPNVAEDNGLTFVYEKIELPTAVVLQKIERNGVLIDP 533 Query: 608 ERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPST 667 + L +QS++LGKRMLEIEQ AY+LA QPFNLNSPKQ+GEI F KL+LPVVKKT SG+PST Sbjct: 534 DLLAKQSNELGKRMLEIEQNAYELAEQPFNLNSPKQIGEIFFEKLKLPVVKKTPSGSPST 593 Query: 668 DEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMINPASGRVHTNYAQAVAVTGRL 727 DEEVLQKLAEDYPLPKVLL+YRGL+KLKSTYTDKLPKMI+P +GRVHTNYAQAVAVTGRL Sbjct: 594 DEEVLQKLAEDYPLPKVLLEYRGLSKLKSTYTDKLPKMIDPTTGRVHTNYAQAVAVTGRL 653 Query: 728 SSNEPNLQNIPIRTPEGRRIREAFVAPEGCVIVSADYSQIELRIMAHISEDENMLKAFAN 787 +SN+PNLQNIPIR EGRRIREAF+A G VIVSADYSQIELRIMAHIS DENML+AFA+ Sbjct: 654 ASNDPNLQNIPIRNAEGRRIREAFIAAPGNVIVSADYSQIELRIMAHISGDENMLQAFAD 713 Query: 788 NEDIHKATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLAGNLGIERSAAQMYID 847 EDIH+ATAAEIFG+ V+SEQRRYAKVINFGLIYGMSAFGLAGNLGIERSAAQ YI+ Sbjct: 714 GEDIHRATAAEIFGVERRAVDSEQRRYAKVINFGLIYGMSAFGLAGNLGIERSAAQSYIE 773 Query: 848 KYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ 907 +YF RF+GVKRYMDETRL+AKARGYV+TVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ Sbjct: 774 RYFHRFAGVKRYMDETRLEAKARGYVQTVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ 833 Query: 908 GTAADLIKLAMIAVQDWLESTGMKSRMIMQVHDELVLEVPQDELAVVREKLPELMKNVAE 967 GTAADLIKLAMIAVQ WLE+ ++S+MIMQVHDELVLEVP+ EL +VREKLPELM++VA+ Sbjct: 834 GTAADLIKLAMIAVQGWLETEKLQSKMIMQVHDELVLEVPETELPLVREKLPELMRHVAQ 893 Query: 968 LKVPLIAEVGAGKNWDQAH 986 LKVPLIAEVG G NWD+AH Sbjct: 894 LKVPLIAEVGVGNNWDKAH 912