BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0645.p (524 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773888.1| methyl-accepting chemotaxis protein [Herbasp... 701 0.0 ref|ZP_02369848.1| methyl-accepting chemotaxis protein [Burkhold... 358 1e-96 ref|YP_111933.1| methyl-accepting chemotaxis protein [Burkholder... 355 1e-95 ref|ZP_00439166.2| methyl-accepting chemotaxis protein [Burkhold... 354 2e-95 ref|YP_001076650.1| methyl-accepting chemotaxis protein [Burkhol... 354 2e-95 >ref|YP_003773888.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ61980.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 563 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 466/521 (89%), Positives = 491/521 (94%), Gaps = 2/521 (0%) Query: 4 KVNNPVTKLVKEMLETVSERSISLRNLMLPAAPEDVDIEAQYIEGQTQKYKVAAQKLQQL 63 +V NP + LVKEMLETV ERSISLRNLMLPAAPEDVDIEAQYIE Q+ KYK+AAQKLQQL Sbjct: 45 EVKNPESALVKEMLETVGERSISLRNLMLPAAPEDVDIEAQYIEAQSLKYKMAAQKLQQL 104 Query: 64 FADSSDTSEEEKAALPKIQAQAAAAEKLINEAVEFGKRREAYELAQFLKEQYLPVQKSWQ 123 FA+SSDTS+EEKAALPKI AQA+ AEKLINEAVEFGKRREAYELAQFLKEQYLPVQKSWQ Sbjct: 105 FAESSDTSDEEKAALPKIAAQASKAEKLINEAVEFGKRREAYELAQFLKEQYLPVQKSWQ 164 Query: 124 VELKALAALEDKLNREAADSSAAAYARARLLMLLISAIGVVTAILAAIWITRQILRKLGG 183 VELKALAALED+LN+EAA++SA AY+RAR+LMLLISAIGVVTA+LAA W+TR +LRKLGG Sbjct: 165 VELKALAALEDQLNKEAAEASAVAYSRARMLMLLISAIGVVTAVLAAFWLTRHLLRKLGG 224 Query: 184 EPDYAVQIAGQIAEGDLAVVIDTRAGDNDSLLAAMRVMRDKLAAIVTEVRRGSETITTAS 243 EPDYAVQIAGQIAEGDLAVVIDTRAGD+DSL+AAMRVMRDKLAAIV EVR+GSETITTAS Sbjct: 225 EPDYAVQIAGQIAEGDLAVVIDTRAGDHDSLMAAMRVMRDKLAAIVAEVRKGSETITTAS 284 Query: 244 TEIARGNLDLSGRTEQQAGALEETASSMEQLNSTVKQNAENAHQANDLALAASDVAVQGG 303 +EIARGNLDLSGRTEQQAGALEETASSMEQLNSTVKQNAENAHQANDLALAASDVAVQGG Sbjct: 285 SEIARGNLDLSGRTEQQAGALEETASSMEQLNSTVKQNAENAHQANDLALAASDVAVQGG 344 Query: 304 SIVSQVVETMQSINASSQKVADIVSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 363 SIVSQVV+TMQSINASSQKVADIVSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS Sbjct: 345 SIVSQVVQTMQSINASSQKVADIVSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 404 Query: 364 EVRSLAQRSASAAKEIKVLIGDSVGKVENGSKLVEQAGSTMTEIVTSIRRVTDVMTEITH 423 EVRSLAQRSASAAKEIKVLIGDSVGKVENGSKLVEQAGSTM +IVTSIRRVTDVMTEI H Sbjct: 405 EVRSLAQRSASAAKEIKVLIGDSVGKVENGSKLVEQAGSTMHDIVTSIRRVTDVMTEINH 464 Query: 424 ANREQSSGIEQVNEAIIQIDDMTQQNAALVEQAAAAARQLQEQAAGLQQLVSVFRIDAAQ 483 ANREQSSGIEQVNEAIIQIDDMTQQNAALVEQAAAAAR LQEQAAGLQQLVSVFR+DAAQ Sbjct: 465 ANREQSSGIEQVNEAIIQIDDMTQQNAALVEQAAAAARSLQEQAAGLQQLVSVFRLDAAQ 524 Query: 484 ARVTSSTSATYAQPASAERVIDVTPGAPELPGANAALAVQG 524 A T+A PA+ ERVIDVTPGAPELP LAVQG Sbjct: 525 AH--GHTAAPAHAPAAVERVIDVTPGAPELPAGGNVLAVQG 563 >ref|ZP_02369848.1| methyl-accepting chemotaxis protein [Burkholderia thailandensis TXDOH] Length = 557 Score = 358 bits (920), Expect = 1e-96, Method: Composition-based stats. Identities = 249/482 (51%), Positives = 350/482 (72%), Gaps = 7/482 (1%) Query: 3 SKVNNPVTKLVKEMLETVSERSISLRNLMLPAAPEDVDIEAQYIEGQTQKYKVAAQKLQQ 62 ++VN+ KL ++ +++ER+++LRNL+L +++ IE I+ QT+ YK + +L Sbjct: 40 TEVNSVEAKLAAKLELSITERALALRNLILLDQQDEMQIELNRIDAQTKLYKESRDRLAT 99 Query: 63 LFADSSDTSEEEKAALPKIQAQAAAAEKLINEA---VEFGKRREAYELAQFLKEQYLPVQ 119 +FA + D + EE+ L +I Q AA+ I A + G++ +AY+L +F ++ PVQ Sbjct: 100 MFA-TLDGTHEERTLLDQIGLQGDAADGFIARARAMILAGQKDDAYKLLRF---EFRPVQ 155 Query: 120 KSWQVELKALAALEDKLNREAADSSAAAYARARLLMLLISAIGVVTAILAAIWITRQILR 179 W + L ALE+K N EA + AY R+R M + A+ +++++++A ITR I+R Sbjct: 156 ARWWALTRELKALEEKQNEEATAHAKQAYERSRTWMFALGALALLSSVVSAWLITRGIVR 215 Query: 180 KLGGEPDYAVQIAGQIAEGDLAVVIDTRAGDNDSLLAAMRVMRDKLAAIVTEVRRGSETI 239 +LGGEP A A IA GDL+V ID R GD+ SL+ +M+ MRD LA IV++V ++TI Sbjct: 216 QLGGEPCDAAHAANMIAAGDLSVAIDVRYGDDTSLMRSMKSMRDSLAQIVSQVHVSADTI 275 Query: 240 TTASTEIARGNLDLSGRTEQQAGALEETASSMEQLNSTVKQNAENAHQANDLALAASDVA 299 TAS +IA GNLDLS RTEQQA +LEETA+SMEQL +TV+QN +N+ QA+ LA +AS VA Sbjct: 276 ATASEQIATGNLDLSARTEQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASQVA 335 Query: 300 VQGGSIVSQVVETMQSINASSQKVADIVSVIDGIAFQTNILALNAAVEAARAGEQGRGFA 359 +GG+ V+QVV+ M SI+A++QK+ +I+ VIDGIAFQTNILALNAAVEAARAGEQGRGFA Sbjct: 336 EKGGAAVTQVVDAMGSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFA 395 Query: 360 VVASEVRSLAQRSASAAKEIKVLIGDSVGKVENGSKLVEQAGSTMTEIVTSIRRVTDVMT 419 VVASEVRSLAQRSA+AA+EIK LIG SV +VE G +L ++AG+TM E+V SIRRVT +M Sbjct: 396 VVASEVRSLAQRSATAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTRIMA 455 Query: 420 EITHANREQSSGIEQVNEAIIQIDDMTQQNAALVEQAAAAARQLQEQAAGLQQLVSVFRI 479 EIT A+ +Q+ GI +++ AI Q+D +TQQNA+LVE+AAAAA ++EQ+A L + V VF++ Sbjct: 456 EITRASEQQTGGIVEIDRAITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKL 515 Query: 480 DA 481 DA Sbjct: 516 DA 517 >ref|YP_111933.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei K96243] emb|CAH39405.1| putative methyl-accepting chemotaxis protein [Burkholderia pseudomallei K96243] Length = 563 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 250/485 (51%), Positives = 352/485 (72%), Gaps = 7/485 (1%) Query: 3 SKVNNPVTKLVKEMLETVSERSISLRNLMLPAAPEDVDIEAQYIEGQTQKYKVAAQKLQQ 62 ++VN+ KL ++ +++ER+++LRNL+L +++ IE I+ + + Y+ + +L Sbjct: 46 TEVNSVEAKLAAKLELSITERALALRNLILLDRQDEMQIEQDRIDAKAKLYRQSRDRLAT 105 Query: 63 LFADSSDTSEEEKAALPKIQAQAAAAEKLINEA---VEFGKRREAYELAQFLKEQYLPVQ 119 +FA + D + +E+A L +I Q AA+ I A + G++ +AY+L +F ++ PVQ Sbjct: 106 MFA-TLDGTPQERALLEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRF---EFRPVQ 161 Query: 120 KSWQVELKALAALEDKLNREAADSSAAAYARARLLMLLISAIGVVTAILAAIWITRQILR 179 W + L ALE+K N EA + AAY +R ML++ A+ +V+++++A ITR I+R Sbjct: 162 AKWWALTRELKALEEKQNEEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVR 221 Query: 180 KLGGEPDYAVQIAGQIAEGDLAVVIDTRAGDNDSLLAAMRVMRDKLAAIVTEVRRGSETI 239 +LGGEP A A IA GDL+V I R GD SL+ AM+ MRD LA IV++V ++TI Sbjct: 222 QLGGEPCDAAHAANMIAAGDLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTI 281 Query: 240 TTASTEIARGNLDLSGRTEQQAGALEETASSMEQLNSTVKQNAENAHQANDLALAASDVA 299 TAS +IA GNLDLS RTEQQA +LEETA+SMEQL +TV+QN +N+ QA+ LA +AS VA Sbjct: 282 ATASGQIASGNLDLSARTEQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVA 341 Query: 300 VQGGSIVSQVVETMQSINASSQKVADIVSVIDGIAFQTNILALNAAVEAARAGEQGRGFA 359 +GG+ V+QVV+ M SI+A++QK+ +I+ VIDGIAFQTNILALNAAVEAARAGEQGRGFA Sbjct: 342 EKGGTAVTQVVDAMGSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFA 401 Query: 360 VVASEVRSLAQRSASAAKEIKVLIGDSVGKVENGSKLVEQAGSTMTEIVTSIRRVTDVMT 419 VVASEVRSLAQRSA+AA+EIK LIG SV +VE G +L ++AG+TM E+V SIRRVT +M Sbjct: 402 VVASEVRSLAQRSATAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMA 461 Query: 420 EITHANREQSSGIEQVNEAIIQIDDMTQQNAALVEQAAAAARQLQEQAAGLQQLVSVFRI 479 EIT A+ +Q+SGI +++ AI Q+D +TQQNA+LVE+AAAAA ++EQ+A L + V VF++ Sbjct: 462 EITRASEQQTSGIVEIDRAITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKL 521 Query: 480 DAAQA 484 DA A Sbjct: 522 DAYPA 526 >ref|ZP_00439166.2| methyl-accepting chemotaxis protein [Burkholderia mallei GB8 horse 4] ref|ZP_04883263.1| methyl-accepting chemotaxis protein [Burkholderia mallei ATCC 10399] gb|EDP87617.1| methyl-accepting chemotaxis protein [Burkholderia mallei ATCC 10399] gb|EEP84510.1| methyl-accepting chemotaxis protein [Burkholderia mallei GB8 horse 4] Length = 566 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 250/485 (51%), Positives = 352/485 (72%), Gaps = 7/485 (1%) Query: 3 SKVNNPVTKLVKEMLETVSERSISLRNLMLPAAPEDVDIEAQYIEGQTQKYKVAAQKLQQ 62 ++VN+ KL ++ +++ER+++LRNL+L +++ IE I+ + + Y+ + +L Sbjct: 46 TEVNSVEAKLAAKLELSITERALALRNLILLDRQDEMQIEQDRIDAKAKLYRQSRDRLAT 105 Query: 63 LFADSSDTSEEEKAALPKIQAQAAAAEKLINEA---VEFGKRREAYELAQFLKEQYLPVQ 119 +FA + D + +E+A L +I Q AA+ I A + G++ +AY+L +F ++ PVQ Sbjct: 106 MFA-TLDGTPQERALLEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRF---EFRPVQ 161 Query: 120 KSWQVELKALAALEDKLNREAADSSAAAYARARLLMLLISAIGVVTAILAAIWITRQILR 179 W + L ALE+K N EA + AAY +R ML++ A+ +V+++++A ITR I+R Sbjct: 162 AKWWALTRELKALEEKQNEEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVR 221 Query: 180 KLGGEPDYAVQIAGQIAEGDLAVVIDTRAGDNDSLLAAMRVMRDKLAAIVTEVRRGSETI 239 +LGGEP A A IA GDL+V I R GD SL+ AM+ MRD LA IV++V ++TI Sbjct: 222 QLGGEPCDAAHAANMIAAGDLSVAIGVRDGDEVSLMHAMKSMRDSLAEIVSQVHVSADTI 281 Query: 240 TTASTEIARGNLDLSGRTEQQAGALEETASSMEQLNSTVKQNAENAHQANDLALAASDVA 299 TAS +IA GNLDLS RTEQQA +LEETA+SMEQL +TV+QN +N+ QA+ LA +AS VA Sbjct: 282 ATASGQIASGNLDLSARTEQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVA 341 Query: 300 VQGGSIVSQVVETMQSINASSQKVADIVSVIDGIAFQTNILALNAAVEAARAGEQGRGFA 359 +GG+ V+QVV+ M SI+A++QK+ +I+ VIDGIAFQTNILALNAAVEAARAGEQGRGFA Sbjct: 342 EKGGAAVTQVVDAMGSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFA 401 Query: 360 VVASEVRSLAQRSASAAKEIKVLIGDSVGKVENGSKLVEQAGSTMTEIVTSIRRVTDVMT 419 VVASEVRSLAQRSA+AA+EIK LIG SV +VE G +L ++AG+TM E+V SIRRVT +M Sbjct: 402 VVASEVRSLAQRSATAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMA 461 Query: 420 EITHANREQSSGIEQVNEAIIQIDDMTQQNAALVEQAAAAARQLQEQAAGLQQLVSVFRI 479 EIT A+ +Q+SGI +++ AI Q+D +TQQNA+LVE+AAAAA ++EQ+A L + V VF++ Sbjct: 462 EITRASEQQTSGIVEIDRAITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKL 521 Query: 480 DAAQA 484 DA A Sbjct: 522 DAYPA 526 >ref|YP_001076650.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106a] ref|ZP_04810094.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106b] gb|ABN95140.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106a] gb|EES20719.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106b] Length = 562 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 250/485 (51%), Positives = 351/485 (72%), Gaps = 7/485 (1%) Query: 3 SKVNNPVTKLVKEMLETVSERSISLRNLMLPAAPEDVDIEAQYIEGQTQKYKVAAQKLQQ 62 ++VN+ KL ++ +++ER+++LRNL+L +++ IE I+ + + Y+ + +L Sbjct: 45 TEVNSVEAKLAAKLELSITERALALRNLILLDRQDEMQIEQDRIDAKAKLYRQSRDRLAT 104 Query: 63 LFADSSDTSEEEKAALPKIQAQAAAAEKLINEA---VEFGKRREAYELAQFLKEQYLPVQ 119 +FA + D + +E+A L +I Q AA+ I A + G++ +AY+L +F ++ PVQ Sbjct: 105 MFA-TLDGTPQERALLEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRF---EFRPVQ 160 Query: 120 KSWQVELKALAALEDKLNREAADSSAAAYARARLLMLLISAIGVVTAILAAIWITRQILR 179 W + L ALE+K N EA + AAY R ML++ A+ +V+++++A ITR I+R Sbjct: 161 AKWWALTRELKALEEKQNEEATLHAKAAYEEGRTWMLVLGALALVSSVVSAWLITRGIVR 220 Query: 180 KLGGEPDYAVQIAGQIAEGDLAVVIDTRAGDNDSLLAAMRVMRDKLAAIVTEVRRGSETI 239 +LGGEP A A IA GDL+V I R GD SL+ AM+ MRD LA IV++V ++TI Sbjct: 221 QLGGEPCDAAHAANMIAAGDLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTI 280 Query: 240 TTASTEIARGNLDLSGRTEQQAGALEETASSMEQLNSTVKQNAENAHQANDLALAASDVA 299 TAS +IA GNLDLS RTEQQA +LEETA+SMEQL +TV+QN +N+ QA+ LA +AS VA Sbjct: 281 ATASGQIASGNLDLSARTEQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVA 340 Query: 300 VQGGSIVSQVVETMQSINASSQKVADIVSVIDGIAFQTNILALNAAVEAARAGEQGRGFA 359 +GG+ V+QVV+ M SI+A++QK+ +I+ VIDGIAFQTNILALNAAVEAARAGEQGRGFA Sbjct: 341 EKGGAAVTQVVDAMGSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFA 400 Query: 360 VVASEVRSLAQRSASAAKEIKVLIGDSVGKVENGSKLVEQAGSTMTEIVTSIRRVTDVMT 419 VVASEVRSLAQRSA+AA+EIK LIG SV +VE G +L ++AG+TM E+V SIRRVT +M Sbjct: 401 VVASEVRSLAQRSATAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMA 460 Query: 420 EITHANREQSSGIEQVNEAIIQIDDMTQQNAALVEQAAAAARQLQEQAAGLQQLVSVFRI 479 EIT A+ +Q+SGI +++ AI Q+D +TQQNA+LVE+AAAAA ++EQ+A L + V VF++ Sbjct: 461 EITRASEQQTSGIVEIDRAITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKL 520 Query: 480 DAAQA 484 DA A Sbjct: 521 DAYPA 525