BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0641.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773892.1| isopenicillin N synthase [Herbaspirillum ser... 613 e-173 ref|XP_002683949.1| PREDICTED: oxidase-like protein-like [Bos ta... 297 1e-78 ref|ZP_06067727.1| predicted protein [Acinetobacter junii SH205]... 295 8e-78 gb|EGP54270.1| isopenicillin N synthase [Agrobacterium tumefacie... 293 3e-77 ref|ZP_06725954.1| oxidoreductase [Acinetobacter haemolyticus AT... 291 8e-77 >ref|YP_003773892.1| isopenicillin N synthase [Herbaspirillum seropedicae SmR1] gb|ADJ61984.1| isopenicillin N synthase (dioxygenase) protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 299/328 (91%), Positives = 308/328 (93%) Query: 1 MIPYTVPMTARRIPVIDFADAFSPELARREALAWEIHKISRDVGFFYLVNHGVAPSLVEQ 60 MIPYT PMTARRIPVIDFADAFSPELARREALAWEIHKISRDVGFFYLVNHGV +L++ Sbjct: 1 MIPYTPPMTARRIPVIDFADAFSPELARREALAWEIHKISRDVGFFYLVNHGVPQALIDG 60 Query: 61 QFDWARRFFALPQASKSAIDMRHSPSGYGYERMGAQALDEGSPADLKEGFQFGFDIAPDH 120 QFDWARRFFALPQASKSAIDMRHS SGYGYERMGAQALDEGSPADLKEGFQFGFDIAPDH Sbjct: 61 QFDWARRFFALPQASKSAIDMRHSASGYGYERMGAQALDEGSPADLKEGFQFGFDIAPDH 120 Query: 121 PYVQRGLLRYGHHLWPQDLPGFEEHSRLYYDAVRDLSHRLLGVIALSLEMPEDFFEPVLQ 180 PYV RGLLRYGH+LWPQDLPGFE HSR YY+AVR LSHRLLGVIALSLEMPEDFF PVL Sbjct: 121 PYVLRGLLRYGHNLWPQDLPGFETHSRQYYEAVRALSHRLLGVIALSLEMPEDFFTPVLH 180 Query: 181 APIATQRMLHYPPQPDVARHNQIGAGAHTDWGLVTILAQDDIGGLEICNADGQWVSAPPI 240 PIATQRMLHYPPQP A+HNQIGAGAHTDWGLVTILAQD IGGLEICNA+G WVSAPPI Sbjct: 181 TPIATQRMLHYPPQPASAQHNQIGAGAHTDWGLVTILAQDAIGGLEICNAEGDWVSAPPI 240 Query: 241 AESFVVNIGDLLQRWSNDLYHSNAHRVLNAGSAPRYSLPFFQDGDQAAVVACLPSCCSDE 300 A SFVVNIGDLLQRWSNDLYHSNAHRV N G+APRYSLPFFQDGDQAAVVACLP+CCS E Sbjct: 241 AGSFVVNIGDLLQRWSNDLYHSNAHRVCNVGNAPRYSLPFFQDGDQAAVVACLPTCCSAE 300 Query: 301 RPARYAPCTIGDYLEMKVKQTFGAVAAA 328 RPARYAPCTIGDYLEMKVKQTFGAVAAA Sbjct: 301 RPARYAPCTIGDYLEMKVKQTFGAVAAA 328 >ref|XP_002683949.1| PREDICTED: oxidase-like protein-like [Bos taurus] gb|DAA33835.1| oxidase-like protein-like [Bos taurus] Length = 329 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 153/329 (46%), Positives = 215/329 (65%), Gaps = 2/329 (0%) Query: 1 MIPYTVPMTARRIPVIDFADAFSPELARREALAWEIHKISRDVGFFYLVNHGVAPSLVEQ 60 M+ YT P TA+ IPVID +D+FS L +R+++AWEIHK R GFFY+ NHG+A ++++ Sbjct: 1 MLIYTPPSTAKSIPVIDLSDSFSDNLEKRKSVAWEIHKACRTTGFFYIKNHGIASEVLQK 60 Query: 61 QFDWARRFFALPQASKSAIDMRHSPSGYGYERMGAQALDEGSPADLKEGFQFGFDIAPDH 120 Q D A++FF LP +K ID ++S GYE M AQ LDEGSP DLKEGF G ++ H Sbjct: 61 QLDIAKQFFDLPIENKLEIDFKNSKCLRGYEPMAAQTLDEGSPPDLKEGFMSGKNLDSSH 120 Query: 121 PYVQRGLLRYGHHLWPQDLPGFEEHSRLYYDAVRDLSHRLLGVIALSLEMPEDFFEPVLQ 180 PYVQ+G ++G + WP+DLP + + Y V L L G++ALSL + E++FE Sbjct: 121 PYVQKGYPQHGQNQWPEDLPEMKTQTETYIQQVLKLGKHLAGLLALSLGLEENYFEVGYD 180 Query: 181 APIATQRMLHYPPQPDVARHNQIGAGAHTDWGLVTILAQDDIGGLEICNADGQWVSAPPI 240 + RMLHYPPQ + +NQ+G GAHTDWGL+T+L QD++GGLE+ N++G+W+ AP I Sbjct: 181 EAVIITRMLHYPPQSEEIINNQLGCGAHTDWGLLTLLLQDEVGGLEVRNSEGEWIRAPHI 240 Query: 241 AESFVVNIGDLLQRWSNDLYHSNAHRVLNAGSA-PRYSLPFFQDGDQAAVVACLPSCCSD 299 ++F+VN+GDL+Q +N LY SN HRV N+ + RYS+P F D D + L + SD Sbjct: 241 PDTFIVNLGDLVQFMTNGLYLSNMHRVFNSKAGVSRYSVPSFFDLDYEYKIKRLQN-LSD 299 Query: 300 ERPARYAPCTIGDYLEMKVKQTFGAVAAA 328 E A T+G+YL ++T+ A A Sbjct: 300 EFKAEPKEMTVGEYLAYMYQKTYAAKKEA 328 >ref|ZP_06067727.1| predicted protein [Acinetobacter junii SH205] gb|EEY91798.1| predicted protein [Acinetobacter junii SH205] Length = 329 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 148/329 (44%), Positives = 213/329 (64%), Gaps = 2/329 (0%) Query: 1 MIPYTVPMTARRIPVIDFADAFSPELARREALAWEIHKISRDVGFFYLVNHGVAPSLVEQ 60 M+ YT P TA+ IPVID +D+FS L +R+++AWEIHK R GFFY+ NHG+A ++++ Sbjct: 1 MLTYTPPSTAKSIPVIDLSDSFSDNLEKRKSVAWEIHKACRTTGFFYIKNHGIASEVLQK 60 Query: 61 QFDWARRFFALPQASKSAIDMRHSPSGYGYERMGAQALDEGSPADLKEGFQFGFDIAPDH 120 Q D A++FF LP K ID ++S GYE M AQ LDEGSP DLKEGF G ++ H Sbjct: 61 QLDIAKQFFDLPIEKKLEIDFKNSKCLRGYEPMAAQTLDEGSPPDLKEGFMSGKNLDSSH 120 Query: 121 PYVQRGLLRYGHHLWPQDLPGFEEHSRLYYDAVRDLSHRLLGVIALSLEMPEDFFEPVLQ 180 PYVQ+G ++G + WP+DLP + + Y L L G++ALSL + E++FE Sbjct: 121 PYVQKGYPQHGQNQWPEDLPEMKTQTETYIQQTLKLGKHLAGLLALSLGLEENYFEAGYD 180 Query: 181 APIATQRMLHYPPQPDVARHNQIGAGAHTDWGLVTILAQDDIGGLEICNADGQWVSAPPI 240 + RMLHYPPQ + +NQ+G+GAHTDWGL+T+L QD++GGLE+ N++G+W+ AP I Sbjct: 181 ETVIITRMLHYPPQSEKIVNNQLGSGAHTDWGLLTLLLQDEVGGLEVRNSEGEWIRAPHI 240 Query: 241 AESFVVNIGDLLQRWSNDLYHSNAHRVLNAGSA-PRYSLPFFQDGDQAAVVACLPSCCSD 299 ++F+VN+GDL+Q +N LY SN HRV N+ + RYS+P F D D + L + D Sbjct: 241 PDTFIVNLGDLVQFMTNGLYLSNMHRVFNSKAGVSRYSVPTFFDLDYEYKIKTLQN-LGD 299 Query: 300 ERPARYAPCTIGDYLEMKVKQTFGAVAAA 328 + A T+G+Y+ ++T+ + A Sbjct: 300 QFKAEPKEMTVGEYIAYMYQKTYASKKEA 328 >gb|EGP54270.1| isopenicillin N synthase [Agrobacterium tumefaciens F2] Length = 331 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 148/329 (44%), Positives = 211/329 (64%), Gaps = 11/329 (3%) Query: 1 MIPYTVPMTARRIPVIDFADAFSPELARREALAWEIHKISRDVGFFYLVNHGVAPSLVEQ 60 M+ Y+ P A IPVID +D A ++ A EIH+ R+ GFFY+ HGVA L+ Sbjct: 1 MLLYSPPQAATSIPVIDISDLTR---AGKKKAAGEIHRACRETGFFYVSQHGVAAELIAG 57 Query: 61 QFDWARRFFALPQASKSAIDMRHSPSGYGYERMGAQALDE------GSPADLKEGFQFGF 114 QF A+ F LP K A+ M++SP+ GYE +G Q LD P DLKE F G Sbjct: 58 QFSAAKALFDLPLEQKMALHMKNSPATAGYEPVGGQVLDSQDDKNTKGPPDLKESFYSGA 117 Query: 115 DIAPDHPYVQRGLLRYGHHLWPQDLPGFEEHSRLYYDAVRDLSHRLLGVIALSLEMPEDF 174 +++ P+ QR + +GH+ WP DLPGF + Y +AV DL R+L ++ALSL++ E++ Sbjct: 118 ELSEADPWFQRRIRAFGHNQWP-DLPGFRAQNLAYREAVSDLGDRILALMALSLDLDENW 176 Query: 175 FEPVLQAPIATQRMLHYPPQPDVARHNQIGAGAHTDWGLVTILAQDDIGGLEICNADGQW 234 F+ AP AT RM+ YPPQP A NQIGAGAHTDWG +TILAQDD+GGLE+ NAD +W Sbjct: 177 FKSFYDAPSATLRMIKYPPQPSGATFNQIGAGAHTDWGGITILAQDDVGGLEVRNADHEW 236 Query: 235 VSAPPIAESFVVNIGDLLQRWSNDLYHSNAHRVLNAGSAP-RYSLPFFQDGDQAAVVACL 293 ++APPI +F++N+GDL+ RW+N +Y+SN HRV N S RYS+PFF + AV+ + Sbjct: 237 ITAPPIEGTFIINLGDLMARWTNGIYNSNMHRVNNNMSQKDRYSIPFFYSPNPDAVIDAI 296 Query: 294 PSCCSDERPARYAPCTIGDYLEMKVKQTF 322 P+C + + P ++A CT +++ ++++ Sbjct: 297 PTCVTSDNPRQFATCTAAEHIGEMFRRSY 325 >ref|ZP_06725954.1| oxidoreductase [Acinetobacter haemolyticus ATCC 19194] gb|EFF84362.1| oxidoreductase [Acinetobacter haemolyticus ATCC 19194] Length = 329 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 147/329 (44%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 1 MIPYTVPMTARRIPVIDFADAFSPELARREALAWEIHKISRDVGFFYLVNHGVAPSLVEQ 60 M+ YT P TA+ IPVID +D+FS L R+++AWEIHK R GFFY+ NHG+A ++++ Sbjct: 1 MLTYTPPSTAKSIPVIDLSDSFSDNLENRKSVAWEIHKACRTTGFFYIKNHGIASEVLQK 60 Query: 61 QFDWARRFFALPQASKSAIDMRHSPSGYGYERMGAQALDEGSPADLKEGFQFGFDIAPDH 120 Q D A++FF LP K +D ++S GYE M AQ LDEGSP DLKEGF G ++ H Sbjct: 61 QLDIAKQFFDLPIEKKLEVDFKNSKCLRGYEPMAAQTLDEGSPPDLKEGFMSGKNLDSSH 120 Query: 121 PYVQRGLLRYGHHLWPQDLPGFEEHSRLYYDAVRDLSHRLLGVIALSLEMPEDFFEPVLQ 180 PYVQ+ ++G + WP+DLP + + Y L L G++ALSL + E++FE Sbjct: 121 PYVQKSYPQHGQNQWPEDLPEMKTQTETYIQQTLKLGKHLAGLLALSLGLEENYFEAGYD 180 Query: 181 APIATQRMLHYPPQPDVARHNQIGAGAHTDWGLVTILAQDDIGGLEICNADGQWVSAPPI 240 + RMLHYPPQ + +NQ+G GAHTDWGL+T+L QD++GGLE+ N++G+W+ AP I Sbjct: 181 ETVIITRMLHYPPQSEKIVNNQLGCGAHTDWGLLTLLLQDEVGGLEVRNSEGEWIRAPHI 240 Query: 241 AESFVVNIGDLLQRWSNDLYHSNAHRVLNAGSA-PRYSLPFFQDGDQAAVVACLPSCCSD 299 ++F+VN+GDL+Q +N LY SN HRV N+ + RYS+P F D D + L + D Sbjct: 241 PDTFIVNLGDLVQFMTNGLYLSNMHRVFNSKAGISRYSVPTFFDLDYEYKIKTLQN-LGD 299 Query: 300 ERPARYAPCTIGDYLEMKVKQTFGAVAAA 328 + A T+G+YL ++T+ + A Sbjct: 300 QFKAEPKEMTVGEYLAYMYQKTYASKKEA 328