BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0639.p (297 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773894.1| nitrate/sulfonate/bicarbonate ABC transporte... 493 e-137 ref|YP_559004.1| ABC nitrate/sulfonate/bicarbonate transporter, ... 357 9e-97 ref|ZP_02881376.1| ABC transporter related [Burkholderia gramini... 354 1e-95 ref|NP_745355.1| ABC transporter ATP-binding protein [Pseudomona... 345 5e-93 gb|ADR60167.1| ABC transporter, ATP-binding protein [Pseudomonas... 343 2e-92 >ref|YP_003773894.1| nitrate/sulfonate/bicarbonate ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ61986.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 278 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 246/261 (94%), Positives = 252/261 (96%) Query: 37 PVLSAQRVEKTYRNGTRALDEVKLDIGRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGHI 96 PVLSAQRVEKTYRNGT ALDEV+LDIGRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGHI Sbjct: 18 PVLSAQRVEKTYRNGTHALDEVRLDIGRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGHI 77 Query: 97 RWWGGNLATVGTPERTLAMVFQEATLMPWATVEQNARLPLELRHVPRAQVDARVAEALKL 156 RWWGGNLATVGTPERTLAMVFQEATLMPWATVEQN RLPL+LRHVPRAQ DARVA +LK Sbjct: 78 RWWGGNLATVGTPERTLAMVFQEATLMPWATVEQNVRLPLDLRHVPRAQADARVAASLKR 137 Query: 157 VGLEKFHKVLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEFTRNKLDADLRDIW 216 VGLE FH VLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEFTRNKLDADLRDIW Sbjct: 138 VGLESFHAVLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEFTRNKLDADLRDIW 197 Query: 217 SKQDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAIEVDGPRDEAFRISAPFMQYC 276 S+QDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAI+ GPRDEAFR+SAPFMQYC Sbjct: 198 SRQDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAIDAPGPRDEAFRMSAPFMQYC 257 Query: 277 KTLSDYLTLANQQGDGHEAQH 297 KTLSDYLTLANQQGDGHEAQH Sbjct: 258 KTLSDYLTLANQQGDGHEAQH 278 >ref|YP_559004.1| ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit [Burkholderia xenovorans LB400] gb|ABE30952.1| ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit [Burkholderia xenovorans LB400] Length = 277 Score = 357 bits (917), Expect = 9e-97, Method: Composition-based stats. Identities = 182/262 (69%), Positives = 215/262 (82%), Gaps = 4/262 (1%) Query: 35 APPVLSAQRVEKTYRNGTRALDEVKLDIGRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHG 94 A P LS QRV+K Y NGT AL++V+L I GEFVSLLGPSGCGKSTLLKMFAG+E P+HG Sbjct: 12 AAPSLSVQRVDKRYPNGTIALEDVRLAIEPGEFVSLLGPSGCGKSTLLKMFAGIETPTHG 71 Query: 95 HIRWWGGNLATVGTPERTLAMVFQEATLMPWATVEQNARLPLELRHVPRAQVDARVAEAL 154 H+RWWG TVG+P R ++MVFQEATLMPWATV N RLPL+L HVPR + DARVA AL Sbjct: 72 HMRWWGQPFGTVGSPGRRMSMVFQEATLMPWATVADNVRLPLDLAHVPRREADARVAAAL 131 Query: 155 KLVGLEKFHKVLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEFTRNKLDADLRD 214 VGL +F LPRELSGGMQMRAS+ARAL T P+LLL+DEPFGALDEFTRN+LD+DLR Sbjct: 132 DGVGLARFGNALPRELSGGMQMRASLARALVTEPDLLLLDEPFGALDEFTRNRLDSDLRA 191 Query: 215 IWSKQDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAIEVDGP--RDEAFRISAPF 272 +W ++ +TVVFVTHSIYEAV+LS RV+VM ARPGR+IADV I DGP RDEA+R+SAPF Sbjct: 192 LWQRRGMTVVFVTHSIYEAVYLSGRVVVMQARPGRIIADVPI--DGPLKRDEAYRVSAPF 249 Query: 273 MQYCKTLSDYLTLANQQGDGHE 294 MQ+CKTLS+ +T A++ +E Sbjct: 250 MQHCKTLSELITDAHRASFANE 271 >ref|ZP_02881376.1| ABC transporter related [Burkholderia graminis C4D1M] gb|EDT12805.1| ABC transporter related [Burkholderia graminis C4D1M] Length = 265 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 179/255 (70%), Positives = 208/255 (81%), Gaps = 3/255 (1%) Query: 37 PVLSAQRVEKTYRNGTRALDEVKLDIGRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGHI 96 P LS QRV+K Y NGT AL +V+LDIG GEFVSLLGPSGCGKSTLLKMFAG+E P+ GH+ Sbjct: 7 PALSVQRVDKIYANGTTALTDVRLDIGAGEFVSLLGPSGCGKSTLLKMFAGIESPTRGHM 66 Query: 97 RWWGGNLA---TVGTPERTLAMVFQEATLMPWATVEQNARLPLELRHVPRAQVDARVAEA 153 RWWG LA TV T R ++MVFQEATLMPWA++ N RLPL+L HVPR + DARVA+A Sbjct: 67 RWWGQPLAMTGTVRTKGRRMSMVFQEATLMPWASIAANVRLPLDLSHVPRKEADARVADA 126 Query: 154 LKLVGLEKFHKVLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEFTRNKLDADLR 213 L VGL F PRELSGGMQMRAS+ARAL T P+LLL+DEPFGALDEFTRNKLDADLR Sbjct: 127 LANVGLAGFGDARPRELSGGMQMRASLARALVTEPDLLLLDEPFGALDEFTRNKLDADLR 186 Query: 214 DIWSKQDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAIEVDGPRDEAFRISAPFM 273 +W + +TVVFVTHSIYEAV+LSSRV+VM ARPGRVIADV I+ RDEA+R+SAPF+ Sbjct: 187 KLWQSRGMTVVFVTHSIYEAVYLSSRVVVMQARPGRVIADVPIDGKEARDEAYRVSAPFL 246 Query: 274 QYCKTLSDYLTLANQ 288 +CKTLSD ++ A+Q Sbjct: 247 AHCKTLSDLISDAHQ 261 >ref|NP_745355.1| ABC transporter ATP-binding protein [Pseudomonas putida KT2440] gb|AAN68819.1|AE016514_8 ABC transporter, ATP-binding protein [Pseudomonas putida KT2440] Length = 282 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 189/266 (71%), Positives = 206/266 (77%), Gaps = 11/266 (4%) Query: 31 ALPDAPPV---LSAQRVEKTYRNGTRALDEVKLDIGRGEFVSLLGPSGCGKSTLLKMFAG 87 ALP+ V L A +VEKTY NGT AL VKL I RGEFVSLLGPSGCGKSTLLKMFAG Sbjct: 15 ALPNTIGVDTPLFANQVEKTYSNGTHALSRVKLAIERGEFVSLLGPSGCGKSTLLKMFAG 74 Query: 88 LEEPSHGHIRWWG----GNLATVGTPERTLAMVFQEATLMPWATVEQNARLPLELRHVPR 143 LE+PS GH+RWWG G GTP R+LAMVFQEATLMPWA V N RLPL+L P+ Sbjct: 75 LEQPSAGHVRWWGKDAPGTDHHAGTPGRSLAMVFQEATLMPWAKVHDNVRLPLDLAGAPK 134 Query: 144 AQVDARVAEALKLVGLEKFHKVLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEF 203 AQ +V AL+LVGL KF V PRELSGGMQMRASIARALAT PNLLLMDEPFGALDEF Sbjct: 135 AQSQLKVQAALELVGLGKFGDVYPRELSGGMQMRASIARALATEPNLLLMDEPFGALDEF 194 Query: 204 TRNKLDADLRDIWSKQDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAIEVDGP-- 261 TRNKLD+DLR +W K+DLTVVFVTHSI+EAV+LSSRVIVM ARPGRVIADV I DGP Sbjct: 195 TRNKLDSDLRQLWLKRDLTVVFVTHSIFEAVYLSSRVIVMGARPGRVIADVII--DGPLE 252 Query: 262 RDEAFRISAPFMQYCKTLSDYLTLAN 287 RDEA+R S F++ C LS L AN Sbjct: 253 RDEAYRTSPAFIEQCAHLSRLLAQAN 278 >gb|ADR60167.1| ABC transporter, ATP-binding protein [Pseudomonas putida BIRD-1] Length = 282 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 187/266 (70%), Positives = 205/266 (77%), Gaps = 11/266 (4%) Query: 31 ALPDAPPV---LSAQRVEKTYRNGTRALDEVKLDIGRGEFVSLLGPSGCGKSTLLKMFAG 87 ALP+ V L A +VEKTY NGT AL VKL I RGEFVSLLGPSGCGKSTLLKMFAG Sbjct: 15 ALPNTIGVDTPLFANQVEKTYSNGTHALSRVKLAIERGEFVSLLGPSGCGKSTLLKMFAG 74 Query: 88 LEEPSHGHIRWWG----GNLATVGTPERTLAMVFQEATLMPWATVEQNARLPLELRHVPR 143 LE+PS GH+RWWG G GTP R+LAMVFQEATLMPWA V N RLPL+L P+ Sbjct: 75 LEQPSAGHVRWWGKDAPGTDHHAGTPGRSLAMVFQEATLMPWAKVHDNVRLPLDLAGAPK 134 Query: 144 AQVDARVAEALKLVGLEKFHKVLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEF 203 AQ +V AL+LVGL KF V PRELSGGMQMRASIARALAT PNLLLMDEPFGALDEF Sbjct: 135 AQSQHKVQAALELVGLGKFGDVYPRELSGGMQMRASIARALATEPNLLLMDEPFGALDEF 194 Query: 204 TRNKLDADLRDIWSKQDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAIEVDGP-- 261 TRNKLD+DLR +W ++DLTVVFVTHSI+EAV+LSSRVIVM ARPGRVIADV I DGP Sbjct: 195 TRNKLDSDLRQLWLQRDLTVVFVTHSIFEAVYLSSRVIVMGARPGRVIADVII--DGPLE 252 Query: 262 RDEAFRISAPFMQYCKTLSDYLTLAN 287 RDE +R S F++ C LS L AN Sbjct: 253 RDETYRTSPAFIEQCAHLSRLLAQAN 278