BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0636.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773897.1| transcription regulator protein [Herbaspiril... 382 e-104 ref|YP_004751456.1| hypothetical protein CFU_0799 [Collimonas fu... 289 3e-76 ref|ZP_08273848.1| YqgE [Oxalobacteraceae bacterium IMCC9480] >g... 276 2e-72 ref|YP_001354640.1| transcriptional regulator [Janthinobacterium... 268 6e-70 ref|YP_001100979.1| hypothetical protein HEAR2740 [Herminiimonas... 264 1e-68 >ref|YP_003773897.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ61989.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 193 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 187/193 (96%), Positives = 193/193 (100%) Query: 60 LELDLTNHFLIAMPSMLDPIFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKL 119 +ELDLTNHFLIAMPSMLDPIFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKL Sbjct: 1 MELDLTNHFLIAMPSMLDPIFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKL 60 Query: 120 EIRPDTPDAMPELYRRPVMFGGPVQVERGFVLHSTSEKYSSTLQVTDEVALTTSKDVLEA 179 EI+PDTPDAMPELYRRPVMFGGPVQVERGFVLHSTSEKYSSTLQVTDEVALTTSKDVLEA Sbjct: 61 EIQPDTPDAMPELYRRPVMFGGPVQVERGFVLHSTSEKYSSTLQVTDEVALTTSKDVLEA 120 Query: 180 VAHGDGPERVLVTLGCSGWSPGQLEGEIGRNGWLTVKADPAIIFELPVEQRFTAALALLG 239 VAHG+GP+RVLVTLGCSGWSPGQLEGEIGRNGWLTVKADP+IIFELPVE+RFTAALALLG Sbjct: 121 VAHGNGPDRVLVTLGCSGWSPGQLEGEIGRNGWLTVKADPSIIFELPVEERFTAALALLG 180 Query: 240 IDPVMLSGDAGRA 252 IDPVMLSGDAGRA Sbjct: 181 IDPVMLSGDAGRA 193 >ref|YP_004751456.1| hypothetical protein CFU_0799 [Collimonas fungivorans Ter331] gb|AEK60633.1| UPF0301 protein yqgE [Collimonas fungivorans Ter331] Length = 244 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 152/237 (64%), Positives = 180/237 (75%), Gaps = 15/237 (6%) Query: 18 ESVDSFGAFDPFHSDAPSRHAAGSDASGQAEGDDAADEVRPPLELDLTNHFLIAMPSMLD 77 + + S D D+P+R +S +A D PPL +LTNHFLIAMPSMLD Sbjct: 21 DKMRSMAKLDTTPDDSPAR-----KSSAKAGADS------PPL--NLTNHFLIAMPSMLD 67 Query: 78 PIFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKLEIRPD--TPDAMPELYRR 135 P+FGGTVVYLCEHN NGALGVVINKPTDMTM VLFDRI+L+LEI P + + + R Sbjct: 68 PVFGGTVVYLCEHNANGALGVVINKPTDMTMQVLFDRIDLELEISPGLGSLEFGDPIAER 127 Query: 136 PVMFGGPVQVERGFVLHSTSEKYSSTLQVTDEVALTTSKDVLEAVAHGDGPERVLVTLGC 195 PVMFGGPVQVERGFVLH+ + YSSTL+VTD++A+TTSKDVLE VAHG GP+R+LV+LGC Sbjct: 128 PVMFGGPVQVERGFVLHAPIKNYSSTLKVTDQIAMTTSKDVLEEVAHGSGPQRILVSLGC 187 Query: 196 SGWSPGQLEGEIGRNGWLTVKADPAIIFELPVEQRFTAALALLGIDPVMLSGDAGRA 252 SGWS GQLE EI NGWLTV ADPAIIFELP+ +RF AA+ LLGI P ML+ ++GRA Sbjct: 188 SGWSAGQLESEIVHNGWLTVAADPAIIFELPIAERFAAAVNLLGISPYMLTAESGRA 244 >ref|ZP_08273848.1| YqgE [Oxalobacteraceae bacterium IMCC9480] gb|EGF32684.1| YqgE [Oxalobacteraceae bacterium IMCC9480] Length = 219 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 146/226 (64%), Positives = 172/226 (76%), Gaps = 13/226 (5%) Query: 30 HSDAPSRHAAG---SDASGQAEGDDAADEVRPPLELDLTNHFLIAMPSMLDPIFGGTVVY 86 H P + A D +G A+ D P +DLTNHFLIAMP+M DP+FGGTV+Y Sbjct: 4 HKKTPPKTAGTGPHQDPAGLADIDGV------PFGMDLTNHFLIAMPAMADPVFGGTVIY 57 Query: 87 LCEHNHNGALGVVINKPTDMTMDVLFDRINLKLEIRPDTPDAMPELYRRPVMFGGPVQVE 146 LCEHN GALGV+INKPTDMT+ VLF+R++L LEI P P +P+ PVMFGGPVQ+E Sbjct: 58 LCEHNARGALGVIINKPTDMTLQVLFERVDLTLEINPRHP-TLPD---HPVMFGGPVQLE 113 Query: 147 RGFVLHSTSEKYSSTLQVTDEVALTTSKDVLEAVAHGDGPERVLVTLGCSGWSPGQLEGE 206 RGFVLH+ +SS ++VTD++ALTTSKDVLEAVA G GPER+LVTLGCSGWS GQLE E Sbjct: 114 RGFVLHAPPGAFSSMMKVTDDIALTTSKDVLEAVASGQGPERLLVTLGCSGWSAGQLEDE 173 Query: 207 IGRNGWLTVKADPAIIFELPVEQRFTAALALLGIDPVMLSGDAGRA 252 I RNGWLTV ADPA+IF+LPVEQRFTAA+ LLGIDP ML+ AG A Sbjct: 174 IIRNGWLTVAADPAVIFDLPVEQRFTAAIRLLGIDPNMLNAGAGHA 219 >ref|YP_001354640.1| transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89794.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 221 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 135/218 (61%), Positives = 172/218 (78%), Gaps = 4/218 (1%) Query: 35 SRHAAGSDASGQAEGDDAADEVRPPLELDLTNHFLIAMPSMLDPIFGGTVVYLCEHNHNG 94 S+ D++ ++ AA + P L+L +HFLIAMPSMLDP+FGGTVVYLCEHN NG Sbjct: 8 SKSPEHPDSTWESLDFSAAPDTPPRESLNLADHFLIAMPSMLDPVFGGTVVYLCEHNANG 67 Query: 95 ALGVVINKPTDMTMDVLFDRINLKLEIRPDTPDAMPELYRRPVMFGGPVQVERGFVLHST 154 ALGV+INK TDMT+DVL +RI+L LEI P+ + L R PV++GGPVQ +RGFVLH+ Sbjct: 68 ALGVIINKATDMTVDVLLNRIDLTLEIAPE----LSALDRAPVLYGGPVQADRGFVLHAP 123 Query: 155 SEKYSSTLQVTDEVALTTSKDVLEAVAHGDGPERVLVTLGCSGWSPGQLEGEIGRNGWLT 214 +SSTL VT+E++LTTSKD+L AVA G GP+R+LV+LGC+GW GQLE EI RNGWLT Sbjct: 124 RGDFSSTLPVTEEISLTTSKDILAAVALGSGPQRMLVSLGCAGWGAGQLEDEITRNGWLT 183 Query: 215 VKADPAIIFELPVEQRFTAALALLGIDPVMLSGDAGRA 252 V+ADPA++F++P+EQRF AA+ LLGIDP+MLSG+AG A Sbjct: 184 VRADPAVLFDMPLEQRFVAAIKLLGIDPMMLSGEAGHA 221 >ref|YP_001100979.1| hypothetical protein HEAR2740 [Herminiimonas arsenicoxydans] emb|CAL62858.1| Conserved hypothetical protein, putative transcriptional regulator [Herminiimonas arsenicoxydans] Length = 225 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 138/222 (62%), Positives = 168/222 (75%), Gaps = 4/222 (1%) Query: 31 SDAPSRHAAGSDASGQAEGDDAADEVRPPLELDLTNHFLIAMPSMLDPIFGGTVVYLCEH 90 S +PS + ++ + D + EL+L +HFLIAMPSMLDP+FGG VVYLCEH Sbjct: 8 SKSPSEPGSPWESLDFSATPDESSNTASRNELNLADHFLIAMPSMLDPVFGGAVVYLCEH 67 Query: 91 NHNGALGVVINKPTDMTMDVLFDRINLKLEIRPDTPDAMPELYRRPVMFGGPVQVERGFV 150 N NGALGV+INKPTDMT+ VL RI+LKLEI PD +P L + VM+GGPVQ +RGFV Sbjct: 68 NANGALGVIINKPTDMTVSVLLSRIDLKLEI---APDKLP-LEKTLVMYGGPVQADRGFV 123 Query: 151 LHSTSEKYSSTLQVTDEVALTTSKDVLEAVAHGDGPERVLVTLGCSGWSPGQLEGEIGRN 210 LH+ +SSTL V ++ALTTSKD+LEAVA G GP+R+LV+LGCSGW GQLE EI RN Sbjct: 124 LHAPRGNFSSTLPVAGDIALTTSKDILEAVAMGAGPQRMLVSLGCSGWGAGQLEDEIVRN 183 Query: 211 GWLTVKADPAIIFELPVEQRFTAALALLGIDPVMLSGDAGRA 252 GWLTV+ADP I+F+LP+EQRF AAL LLGIDP+MLS +AG A Sbjct: 184 GWLTVRADPDIMFDLPLEQRFVAALKLLGIDPMMLSSEAGHA 225