BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0634.p (170 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773899.1| pyrimidine operon attenuation protein/uracil... 305 1e-81 ref|YP_001354638.1| bifunctional pyrimidine regulatory protein P... 260 5e-68 ref|YP_001100977.1| bifunctional pyrimidine regulatory protein P... 254 4e-66 ref|ZP_04577154.1| pyrimidine regulatory protein PyrR [Oxalobact... 227 5e-58 ref|ZP_08273846.1| Uracil phosphoribosyltransferase [Oxalobacter... 226 7e-58 >ref|YP_003773899.1| pyrimidine operon attenuation protein/uracil phosphoribosyltransferase regulatory protein [Herbaspirillum seropedicae SmR1] gb|ADJ61991.1| pyrimidine operon attenuation protein/uracil phosphoribosyltransferase regulatory protein [Herbaspirillum seropedicae SmR1] Length = 170 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 166/170 (97%), Positives = 168/170 (98%) Query: 1 MSTTPSQLDAEALYQTLVQQIKAGLQGATEVALVGIHSGGAWLAERLATELGLTDRLGFV 60 MSTTPSQLDAEALYQTLVQQIKAGLQGATEVALVGIHSGGAWLAERLA ELGL +RLGFV Sbjct: 1 MSTTPSQLDAEALYQTLVQQIKAGLQGATEVALVGIHSGGAWLAERLAAELGLAERLGFV 60 Query: 61 DVSFYRDDFSEKGLRADVKPSQIPFDVEGATILLVDDVLYTGRTTRAAINELFDYGRPAR 120 DVSFYRDDFSEKGLRADVKPSQ+PFDVEGATILLVDDVLYTGRTTRAAINELFDYGRPAR Sbjct: 61 DVSFYRDDFSEKGLRADVKPSQVPFDVEGATILLVDDVLYTGRTTRAAINELFDYGRPAR 120 Query: 121 VLLAALVDRGGRELPIAADFVAASVELSKQENLQLQRADDGRFSLTVVHA 170 VLLAALVDRGGRELPIAADFVAASVELSKQENLQLQRADDGRFSLTVVHA Sbjct: 121 VLLAALVDRGGRELPIAADFVAASVELSKQENLQLQRADDGRFSLTVVHA 170 >ref|YP_001354638.1| bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase [Janthinobacterium sp. Marseille] gb|ABR90023.1| pyrimidine operon regulatory protein [Janthinobacterium sp. Marseille] Length = 187 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 131/162 (80%), Positives = 146/162 (90%) Query: 8 LDAEALYQTLVQQIKAGLQGATEVALVGIHSGGAWLAERLATELGLTDRLGFVDVSFYRD 67 LDAEALYQ L QQ+KAGL A VA+VGIHSGGAWLAERLA EL LT+RLGF+DVSFYRD Sbjct: 25 LDAEALYQVLAQQVKAGLAHAENVAIVGIHSGGAWLAERLAQELQLTERLGFIDVSFYRD 84 Query: 68 DFSEKGLRADVKPSQIPFDVEGATILLVDDVLYTGRTTRAAINELFDYGRPARVLLAALV 127 DFSEKGLR DVKP+QIPFDV+GATILLVDDVLYTGRTTRAAINELFDYGRPAR++LAAL Sbjct: 85 DFSEKGLRPDVKPTQIPFDVDGATILLVDDVLYTGRTTRAAINELFDYGRPARIMLAALA 144 Query: 128 DRGGRELPIAADFVAASVELSKQENLQLQRADDGRFSLTVVH 169 DRGGRELP+AADFVA ++ + +++L LQRADDGRFSLTV H Sbjct: 145 DRGGRELPVAADFVAKTISIPGEQSLVLQRADDGRFSLTVDH 186 >ref|YP_001100977.1| bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase [Herminiimonas arsenicoxydans] emb|CAL62856.1| Bifunctional protein PyrR [Includes: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase (UPRTase)] [Herminiimonas arsenicoxydans] Length = 172 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 131/164 (79%), Positives = 147/164 (89%) Query: 7 QLDAEALYQTLVQQIKAGLQGATEVALVGIHSGGAWLAERLATELGLTDRLGFVDVSFYR 66 +LDAEALYQ L QQ+K GL A VA+VGI+SGGAWLAERLA EL LT+RLGF+DVSFYR Sbjct: 9 ELDAEALYQQLAQQVKTGLAKAENVAIVGIYSGGAWLAERLAAELQLTERLGFIDVSFYR 68 Query: 67 DDFSEKGLRADVKPSQIPFDVEGATILLVDDVLYTGRTTRAAINELFDYGRPARVLLAAL 126 DDF+EKGLR DVKP+QIPFDV+GATILLVDDVLYTGRTTRAAINELFDYGRPAR++LAAL Sbjct: 69 DDFAEKGLRPDVKPTQIPFDVDGATILLVDDVLYTGRTTRAAINELFDYGRPARIMLAAL 128 Query: 127 VDRGGRELPIAADFVAASVELSKQENLQLQRADDGRFSLTVVHA 170 DRGGRELPIAADFVA ++ + Q++L LQRADDGRFSLTV HA Sbjct: 129 ADRGGRELPIAADFVAQTISIPDQQSLVLQRADDGRFSLTVDHA 172 >ref|ZP_04577154.1| pyrimidine regulatory protein PyrR [Oxalobacter formigenes HOxBLS] gb|EEO28116.1| pyrimidine regulatory protein PyrR [Oxalobacter formigenes HOxBLS] Length = 170 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 116/170 (68%), Positives = 141/170 (82%) Query: 1 MSTTPSQLDAEALYQTLVQQIKAGLQGATEVALVGIHSGGAWLAERLATELGLTDRLGFV 60 M + ++L+AEALY L++QI+ L +VA+VGI SGGAW+AER+ +LGL + GF+ Sbjct: 1 MKPSITELNAEALYAKLLKQIRDALTNEPKVAIVGIRSGGAWIAERIVADLGLENPPGFI 60 Query: 61 DVSFYRDDFSEKGLRADVKPSQIPFDVEGATILLVDDVLYTGRTTRAAINELFDYGRPAR 120 DVSFYRDD++EKGL A+VKP+QIPFDV GATILL+DDVLYTGRTTRAAINELFDYGRPAR Sbjct: 61 DVSFYRDDYAEKGLPAEVKPTQIPFDVVGATILLIDDVLYTGRTTRAAINELFDYGRPAR 120 Query: 121 VLLAALVDRGGRELPIAADFVAASVELSKQENLQLQRADDGRFSLTVVHA 170 +LLAAL+DRG RELPIAADFVAASV L K E L LQ+ ++ FSLTV +A Sbjct: 121 ILLAALIDRGERELPIAADFVAASVSLDKNEKLVLQQTENNTFSLTVENA 170 >ref|ZP_08273846.1| Uracil phosphoribosyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32682.1| Uracil phosphoribosyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 172 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 124/170 (72%), Positives = 138/170 (81%) Query: 1 MSTTPSQLDAEALYQTLVQQIKAGLQGATEVALVGIHSGGAWLAERLATELGLTDRLGFV 60 +S P +LDAEALY L +QI A L VALVGI+SGGAWLAERLA L + DRLGF+ Sbjct: 3 ISLLPHELDAEALYADLERQIAAVLGSTEHVALVGIYSGGAWLAERLAKALKIEDRLGFI 62 Query: 61 DVSFYRDDFSEKGLRADVKPSQIPFDVEGATILLVDDVLYTGRTTRAAINELFDYGRPAR 120 DVSFYRDD +EKGL A VKP+QI F+VEGATILLVDDVLYTGRTTRAAINELFDYGRPAR Sbjct: 63 DVSFYRDDVAEKGLHAAVKPTQIGFEVEGATILLVDDVLYTGRTTRAAINELFDYGRPAR 122 Query: 121 VLLAALVDRGGRELPIAADFVAASVELSKQENLQLQRADDGRFSLTVVHA 170 VLLA LVDRGGRELP+A DFVAA+V L+ +NL LQ+ DG SLTV HA Sbjct: 123 VLLATLVDRGGRELPVAPDFVAATVSLAPDQNLILQQGADGALSLTVNHA 172