BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0632.p (428 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773902.1| dihydroorotase [Herbaspirillum seropedicae S... 814 0.0 ref|YP_004751460.1| dihydroorotase [Collimonas fungivorans Ter33... 691 0.0 ref|YP_001354636.1| dihydroorotase, multifunctional complex type... 681 0.0 emb|CAL62854.2| Putative dihydroorotase-like protein [Herminiimo... 666 0.0 emb|CAQ56987.1| dihydroorotase-like protein [Ralstonia solanacea... 634 e-180 >ref|YP_003773902.1| dihydroorotase [Herbaspirillum seropedicae SmR1] gb|ADJ61994.1| dihydroorotase protein [Herbaspirillum seropedicae SmR1] Length = 428 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 422/428 (98%), Positives = 427/428 (99%) Query: 1 MKLHIKNGRLIDPANGIDAQQDVYVAAGKIVGVGQAPADFVANKTIDATGLIVAPGLVDL 60 MKLHIKNGRLIDPANGIDAQQDVYVAAGKIVGVGQAPADFVANKTIDATGL+VAPGLVDL Sbjct: 1 MKLHIKNGRLIDPANGIDAQQDVYVAAGKIVGVGQAPADFVANKTIDATGLVVAPGLVDL 60 Query: 61 SARLREPGYEYKATLESEMQAAIQGGVTSLVCPPDTDPVLDEPGLVEMLKHRARSLNQAH 120 SARLREPGYEYKATLESEMQAAIQGGVTSLVCPPDTDPVLDEPGLVEMLKHRARSLNQAH Sbjct: 61 SARLREPGYEYKATLESEMQAAIQGGVTSLVCPPDTDPVLDEPGLVEMLKHRARSLNQAH 120 Query: 121 VYPLGALTAGLKGKALTEMAELTEAGCIGFSQAEEPITDTTVLLSALQYAKTFNYTVWLR 180 VYPLGALTAGLKGKALTEMAELT+AGCIGFSQAEEPITDTTVLLSALQYAKTFNYTVWLR Sbjct: 121 VYPLGALTAGLKGKALTEMAELTDAGCIGFSQAEEPITDTTVLLSALQYAKTFNYTVWLR 180 Query: 181 PQDPHLGRTGIAHSGPAASRLGLSGVPVMSETIALYTLFELMRATGARVHLCRMSSAAGL 240 PQDPHLGR+GIAHSGPAASRLGLSGVPVMSETIALYTLFELMRATGARVHLCRMSSAAGL Sbjct: 181 PQDPHLGRSGIAHSGPAASRLGLSGVPVMSETIALYTLFELMRATGARVHLCRMSSAAGL 240 Query: 241 ELVRQAKSEGLPVTCDVGVHHIHLCDLDIGFFDSNARMTPPLRSQRDREAIRTALLDGTI 300 ELVRQAKSEGLPVTCDVGVHHIHLCDLDIGFFDSNARMTPPLRSQRDREAIRTALLDGTI Sbjct: 241 ELVRQAKSEGLPVTCDVGVHHIHLCDLDIGFFDSNARMTPPLRSQRDREAIRTALLDGTI 300 Query: 301 DAVCSDHTPVDDDEKLLPFGEASPGATGLELLLSLSLKWALETEGEGKEVLSKAISKVTH 360 DAVCSDHTPVDDDEKLLPFGEASPGATGLELLLSLSLKWALETEGEGKEVLSKAISKVTH Sbjct: 301 DAVCSDHTPVDDDEKLLPFGEASPGATGLELLLSLSLKWALETEGEGKEVLSKAISKVTH 360 Query: 361 RAAKVAGLKAGNLAVGSVADLCLFDPNTLWKVQGSALASQGKHTPFLGYELPGVVKATIV 420 RAAKVAGLKAGNLAVGSVADLCLFDPN +WKVQG+ALASQGKHTPFLGYELPGVVKATIV Sbjct: 361 RAAKVAGLKAGNLAVGSVADLCLFDPNAMWKVQGAALASQGKHTPFLGYELPGVVKATIV 420 Query: 421 SGHIAFER 428 SGHIAFER Sbjct: 421 SGHIAFER 428 >ref|YP_004751460.1| dihydroorotase [Collimonas fungivorans Ter331] gb|AEK60637.1| Dihydroorotase [Collimonas fungivorans Ter331] Length = 429 Score = 691 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 349/428 (81%), Positives = 385/428 (89%) Query: 1 MKLHIKNGRLIDPANGIDAQQDVYVAAGKIVGVGQAPADFVANKTIDATGLIVAPGLVDL 60 MKLHIKNGRLIDPAN IDAQQD+Y+AAGKIVGVG APADF ANKTIDA+GL+VAPGLVDL Sbjct: 1 MKLHIKNGRLIDPANNIDAQQDLYIAAGKIVGVGSAPADFSANKTIDASGLVVAPGLVDL 60 Query: 61 SARLREPGYEYKATLESEMQAAIQGGVTSLVCPPDTDPVLDEPGLVEMLKHRARSLNQAH 120 S RLREPGYEYKATLESEMQAA+QGGVTSLVCPPDTDPVLDEPGLVEMLKHRA+SLNQAH Sbjct: 61 SVRLREPGYEYKATLESEMQAAMQGGVTSLVCPPDTDPVLDEPGLVEMLKHRAKSLNQAH 120 Query: 121 VYPLGALTAGLKGKALTEMAELTEAGCIGFSQAEEPITDTTVLLSALQYAKTFNYTVWLR 180 VYPLGALT GLKGK LTEMAELT+AGCIGF+QAEEPI DTTVLL A+QYA+TF+YTVWLR Sbjct: 121 VYPLGALTVGLKGKELTEMAELTDAGCIGFAQAEEPILDTTVLLRAMQYARTFDYTVWLR 180 Query: 181 PQDPHLGRTGIAHSGPAASRLGLSGVPVMSETIALYTLFELMRATGARVHLCRMSSAAGL 240 PQDP+LG GIAHSG ASRLGLSGVP M+ETI L T+FEL+RATGARVHLCR+SSA GL Sbjct: 181 PQDPYLGHGGIAHSGAVASRLGLSGVPTMAETIRLQTIFELVRATGARVHLCRISSAPGL 240 Query: 241 ELVRQAKSEGLPVTCDVGVHHIHLCDLDIGFFDSNARMTPPLRSQRDREAIRTALLDGTI 300 EL+R AK EGLP+TCDVG HHIH+ D+DIGFFDSNARMTPP RSQRDR+AIR ALLDGT+ Sbjct: 241 ELIRAAKKEGLPITCDVGAHHIHMTDVDIGFFDSNARMTPPFRSQRDRDAIRQALLDGTV 300 Query: 301 DAVCSDHTPVDDDEKLLPFGEASPGATGLELLLSLSLKWALETEGEGKEVLSKAISKVTH 360 DA+CSDHTPVDDDEKLLPFGEA+PGATGLELLLSL+LKWA E ++ LS+A++K+T Sbjct: 301 DAICSDHTPVDDDEKLLPFGEATPGATGLELLLSLALKWADECVAPEQQGLSRALAKITT 360 Query: 361 RAAKVAGLKAGNLAVGSVADLCLFDPNTLWKVQGSALASQGKHTPFLGYELPGVVKATIV 420 AA+VAGL AG L +GSVAD+CLFDP WKV+ LASQGKHTPFLGYEL G VK TIV Sbjct: 361 DAARVAGLPAGQLTIGSVADICLFDPAVRWKVEAKELASQGKHTPFLGYELCGRVKTTIV 420 Query: 421 SGHIAFER 428 +GHIAFER Sbjct: 421 AGHIAFER 428 >ref|YP_001354636.1| dihydroorotase, multifunctional complex type [Janthinobacterium sp. Marseille] gb|ABR89546.1| dihydroorotase, multifunctional complex type [Janthinobacterium sp. Marseille] Length = 427 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 344/428 (80%), Positives = 388/428 (90%), Gaps = 1/428 (0%) Query: 1 MKLHIKNGRLIDPANGIDAQQDVYVAAGKIVGVGQAPADFVANKTIDATGLIVAPGLVDL 60 MK+HIKNG L+DPANGIDAQQDVY+AAGKI G+G+AP F A+K IDA+GLIVAPGLVDL Sbjct: 1 MKIHIKNGHLVDPANGIDAQQDVYIAAGKIAGIGKAPEGFTASKVIDASGLIVAPGLVDL 60 Query: 61 SARLREPGYEYKATLESEMQAAIQGGVTSLVCPPDTDPVLDEPGLVEMLKHRARSLNQAH 120 SARLREPGYE+KATLESEMQAA+QGGVTSLVCPPDT+PVLDEPGLVEMLKHRA+SLNQAH Sbjct: 61 SARLREPGYEHKATLESEMQAAVQGGVTSLVCPPDTEPVLDEPGLVEMLKHRAKSLNQAH 120 Query: 121 VYPLGALTAGLKGKALTEMAELTEAGCIGFSQAEEPITDTTVLLSALQYAKTFNYTVWLR 180 VYPLGALTAGLKG++LTEMAEL+EAGCIGFSQA+ PI DTTVLL A+QYAKTF YTVWLR Sbjct: 121 VYPLGALTAGLKGESLTEMAELSEAGCIGFSQADNPILDTTVLLRAMQYAKTFEYTVWLR 180 Query: 181 PQDPHLGRTGIAHSGPAASRLGLSGVPVMSETIALYTLFELMRATGARVHLCRMSSAAGL 240 PQDPHLGRTG+AHSGP ASRLGLSGVPVM+ET+AL+T+ EL+R TG RVHLCRMS+AAGL Sbjct: 181 PQDPHLGRTGVAHSGPVASRLGLSGVPVMAETVALHTILELVRVTGTRVHLCRMSTAAGL 240 Query: 241 ELVRQAKSEGLPVTCDVGVHHIHLCDLDIGFFDSNARMTPPLRSQRDREAIRTALLDGTI 300 ELVR AK EGLPV+CDVG HH+HL + DIGFFDSNAR+TPPLRSQRDR+AIR ALLDGTI Sbjct: 241 ELVRAAKKEGLPVSCDVGAHHVHLTENDIGFFDSNARLTPPLRSQRDRDAIRNALLDGTI 300 Query: 301 DAVCSDHTPVDDDEKLLPFGEASPGATGLELLLSLSLKWALETEGEGKEVLSKAISKVTH 360 DA+CSDHTPVDDDEKLLPFGEASPGATGLELLLSL+LKWA E +GK+ +++A++KVT Sbjct: 301 DAICSDHTPVDDDEKLLPFGEASPGATGLELLLSLALKWA-EDCVDGKQQVARAVAKVTT 359 Query: 361 RAAKVAGLKAGNLAVGSVADLCLFDPNTLWKVQGSALASQGKHTPFLGYELPGVVKATIV 420 AA++ GL +G L+VGSVAD+CLFDPN W V LASQGKHTPFLGYEL G VK TIV Sbjct: 360 DAARIVGLPSGQLSVGSVADICLFDPNERWTVAAKVLASQGKHTPFLGYELAGQVKTTIV 419 Query: 421 SGHIAFER 428 +GHIAF+R Sbjct: 420 AGHIAFQR 427 >emb|CAL62854.2| Putative dihydroorotase-like protein [Herminiimonas arsenicoxydans] Length = 432 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 340/432 (78%), Positives = 382/432 (88%), Gaps = 4/432 (0%) Query: 1 MKLHIKNGRLIDPANGIDAQQDVYVAAGKIVGVGQAPADFVANKTIDATGLIVAPGLVDL 60 MK+HIKNG LIDPANGIDA+QDV++AAGKI G+GQAP FVA K IDA+GL+VAPG VDL Sbjct: 1 MKIHIKNGHLIDPANGIDAKQDVFIAAGKIAGLGQAPEGFVAAKVIDASGLVVAPGFVDL 60 Query: 61 SARLREPGYEYKATLESEMQAAIQGGVTSLVCPPDTDPVLDEPGLVEMLKHRARSLNQAH 120 SARLREPGYE+KATLESEMQAAIQGGVTSL+CPPDTDPVLDEPGLVEMLKHRA+SLNQAH Sbjct: 61 SARLREPGYEHKATLESEMQAAIQGGVTSLICPPDTDPVLDEPGLVEMLKHRAKSLNQAH 120 Query: 121 VYPLGALTAGLKGKALTEMAELTEAGCIGFSQAEEPITDTTVLLSALQYAKTFNYTVWLR 180 VYPLGALT GLKG ALTEMAELT+AGCIGF+QA++PI DTTVLL A+QYAKTF+YTVWLR Sbjct: 121 VYPLGALTMGLKGAALTEMAELTDAGCIGFAQADQPILDTTVLLRAMQYAKTFDYTVWLR 180 Query: 181 PQDPHLGRTGIAHSGPAASRLGLSGVPVMSETIALYTLFELMRATGARVHLCRMSSAAGL 240 PQDPHLGR G+AHSGP ASRLGLSGVPVM+ETIAL+T+ EL+R TG RVHLCRMSSAAGL Sbjct: 181 PQDPHLGRKGVAHSGPVASRLGLSGVPVMAETIALHTILELVRVTGTRVHLCRMSSAAGL 240 Query: 241 ELVRQAKSEGLPVTCDVGVHHIHLCDLDIGFFDSNARMTPPLRSQRDREAIRTALLDGTI 300 ELVR AK EGLP++CDVG HHIHL + DIGFFDSNAR+TPPLRSQRDR+AI ALLDGTI Sbjct: 241 ELVRAAKQEGLPISCDVGAHHIHLTENDIGFFDSNARLTPPLRSQRDRDAIHRALLDGTI 300 Query: 301 DAVCSDHTPVDDDEKLLPFGEASPGATGLELLLSLSLKWALET----EGEGKEVLSKAIS 356 DA+CSDHTPVDDDEKLLPFGEASPGATGLELLLSL+LKWA + ++ L +AI+ Sbjct: 301 DAICSDHTPVDDDEKLLPFGEASPGATGLELLLSLALKWAENCADLDKQSSQQSLVQAIA 360 Query: 357 KVTHRAAKVAGLKAGNLAVGSVADLCLFDPNTLWKVQGSALASQGKHTPFLGYELPGVVK 416 K++ AA+V GL +G LA+GSVAD+CLFDP W V ALASQGKHTPFLGYEL G VK Sbjct: 361 KISADAARVVGLPSGQLALGSVADICLFDPAARWTVAAKALASQGKHTPFLGYELSGQVK 420 Query: 417 ATIVSGHIAFER 428 TIV+GHIA++R Sbjct: 421 TTIVAGHIAYQR 432 >emb|CAQ56987.1| dihydroorotase-like protein [Ralstonia solanacearum MolK2] Length = 425 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 310/427 (72%), Positives = 371/427 (86%), Gaps = 4/427 (0%) Query: 1 MKLHIKNGRLIDPANGIDAQQDVYVAAGKIVGVGQAPADFVANKTIDATGLIVAPGLVDL 60 MKLHIK GRLIDPANGIDAQQD+Y+AAGK+VG+G+ PADF ANKTIDATGL+V PGL+DL Sbjct: 1 MKLHIKGGRLIDPANGIDAQQDLYIAAGKVVGIGRTPADFHANKTIDATGLVVCPGLIDL 60 Query: 61 SARLREPGYEYKATLESEMQAAIQGGVTSLVCPPDTDPVLDEPGLVEMLKHRARSLNQAH 120 SARLREPGYEYKATLESEM AA+ GGVTSLVCPPDTDPVLDEPGLVEMLK RAR+LNQAH Sbjct: 61 SARLREPGYEYKATLESEMAAAMAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAH 120 Query: 121 VYPLGALTAGLKGKALTEMAELTEAGCIGFSQAEEPITDTTVLLSALQYAKTFNYTVWLR 180 VYPLGALT GLKG LTEMAELTEAGC+GFSQA+ P+TDT VL+ ALQYA+TF +TVWLR Sbjct: 121 VYPLGALTVGLKGLVLTEMAELTEAGCVGFSQADAPMTDTLVLMRALQYAQTFGFTVWLR 180 Query: 181 PQDPHLGRTGIAHSGPAASRLGLSGVPVMSETIALYTLFELMRATGARVHLCRMSSAAGL 240 P+DP LG+ G+A SGP ASRLGL+GVPVM+ET+ L+T+FELMR+TGARVHLCR+SS AGL Sbjct: 181 PEDPFLGKGGVAASGPLASRLGLAGVPVMAETVRLHTIFELMRSTGARVHLCRLSSVAGL 240 Query: 241 ELVRQAKSEGLPVTCDVGVHHIHLCDLDIGFFDSNARMTPPLRSQRDREAIRTALLDGTI 300 ELVR+AK+EGLPVTCDV VHHI L D+DIG+F+S R PPLR+ RDR+ I AL+DGTI Sbjct: 241 ELVRRAKAEGLPVTCDVNVHHISLTDVDIGYFNSQMRFVPPLRAGRDRDGIVRALVDGTI 300 Query: 301 DAVCSDHTPVDDDEKLLPFGEASPGATGLELLLSLSLKWALETEGEGKEVLSKAISKVTH 360 DA+CSDHTPVDDDEKLLPF EASPGATGLE LL L+L+WA E K L +A++++T Sbjct: 301 DAICSDHTPVDDDEKLLPFAEASPGATGLETLLPLTLRWA----AEHKVDLPRALARITS 356 Query: 361 RAAKVAGLKAGNLAVGSVADLCLFDPNTLWKVQGSALASQGKHTPFLGYELPGVVKATIV 420 A+V GL+AG+L VG++AD+C+FDP WK++ +L SQGK++P+LG+EL G V+AT+V Sbjct: 357 EPARVLGLQAGSLEVGALADVCVFDPEATWKIEPRSLRSQGKNSPYLGFELAGRVRATLV 416 Query: 421 SGHIAFE 427 +GH+A++ Sbjct: 417 AGHLAYD 423