BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0620.p (304 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003525523.1| dTDP-4-dehydrorhamnose reductase [Sideroxyda... 296 3e-78 ref|YP_002260523.1| dtdp-4-dehydrorhamnose reductase protein [Ra... 282 4e-74 emb|CCA89060.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralston... 282 4e-74 emb|CCA81026.1| TDP-rhamnose synthetase, NAD(P)-binding [blood d... 282 5e-74 emb|CAQ56991.1| dtdp-4-dehydrorhamnose reductase protein [Ralsto... 281 7e-74 >ref|YP_003525523.1| dTDP-4-dehydrorhamnose reductase [Sideroxydans lithotrophicus ES-1] gb|ADE13136.1| dTDP-4-dehydrorhamnose reductase [Sideroxydans lithotrophicus ES-1] Length = 299 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 156/299 (52%), Positives = 198/299 (66%), Gaps = 3/299 (1%) Query: 2 KILVTGKNGQLGSELVRAFRGVAEVAAFDRQTLDLADIGQLRSLIRAQAPDVIINAAAYT 61 +ILVTGKNGQ+G EL R+ E+ A D ++DLAD +R IR PD+I+N AAYT Sbjct: 3 RILVTGKNGQVGWELQRSLAAFGEIIALDSDSMDLADPDAIRRTIREVRPDIIVNPAAYT 62 Query: 62 AVDRAETEQAAAHAINAQAPAVMAEEASALGAALIHYSTDYVFDGRKAGPYLETDPTDPQ 121 AVD+AE+E A+A+N AP V+AEEA LGA L+HYSTDYVFDG K PY+E+D +PQ Sbjct: 63 AVDKAESEMELANAVNGIAPGVLAEEAKLLGAILVHYSTDYVFDGSKPAPYVESDVPNPQ 122 Query: 122 SVYGKTKLAGEQAIAAASDKFWIWRTSWVYGVHGGNFLKTMLRLASERTSLRVVADQFGA 181 SVYG+TKLAGEQA+ A+ K I+RTSWVYGVHGGNF+KTMLRLA ER LR+VADQFGA Sbjct: 123 SVYGRTKLAGEQAVRASGCKHLIFRTSWVYGVHGGNFVKTMLRLARERNELRIVADQFGA 182 Query: 182 PTFARAIAEATRDALMAGGNAGTPARVADTAGIYHFTGGGRTNWHGYAQYVIERAAEAGQ 241 PT+A+ IA +T AL R+ +G+YH T GRTNWH +A+ +I A + Sbjct: 183 PTWAKDIANSTATALHNWQQLAWDDRL---SGLYHLTAAGRTNWHQFAETIIREARKYDT 239 Query: 242 PLNITAADIEAIPASAYPVPAPRPSNSCLSLEKFTQTFGLPIAAWQDDVDRCLAELLAH 300 L + I YP+PA RP NS L+ +K FG+ + WQD + C+ L A Sbjct: 240 ALAAKTIAVNPIATHEYPLPAKRPVNSVLANDKVRNAFGIAMPEWQDSLVECVRLLYAQ 298 >ref|YP_002260523.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum IPO1609] emb|CAQ62462.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum IPO1609] Length = 305 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 160/298 (53%), Positives = 195/298 (65%), Gaps = 2/298 (0%) Query: 2 KILVTGKNGQLGSELVRAFRGVAEVAAFDRQTLDLADIGQLRSLIRAQAPDVIINAAAYT 61 ++LVTG NGQ+G EL R+ + EV A DR DL LR L+R PDVI+N AAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDRAETEQAAAHAINAQAPAVMAEEASALGAALIHYSTDYVFDGRKAGPYLETDPTDPQ 121 AVD+AET+ A A+N A V+AEEA ALG+ L+HYSTDYVFDG KAG YLETD +PQ Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYLETDAVNPQ 129 Query: 122 SVYGKTKLAGEQAIAAASDKFWIWRTSWVYGVHGGNFLKTMLRLASERTSLRVVADQFGA 181 SVYGK+KLAGEQAIAA+ + RT WV G HGGNF KTML+L ER SLRV+ADQFGA Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTFARAIAEATRDALMAGGNAGTPARVADTAGIYHFTGGGRTNWHGYAQYVIERAAEAGQ 241 PT A IA+ T + +G R A G+YH G T WHGYA V+ A G Sbjct: 190 PTTAALIADVTAQIVARFWLSGD--RAAFPGGLYHLAASGETTWHGYATAVLRYAKACGL 247 Query: 242 PLNITAADIEAIPASAYPVPAPRPSNSCLSLEKFTQTFGLPIAAWQDDVDRCLAELLA 299 L + IEAIPA+AYP+PAPRP+NS + K T+TFG+ + WQ V L ++ + Sbjct: 248 ELKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQIFS 305 >emb|CCA89060.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia syzygii R24] Length = 305 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 196/298 (65%), Gaps = 2/298 (0%) Query: 2 KILVTGKNGQLGSELVRAFRGVAEVAAFDRQTLDLADIGQLRSLIRAQAPDVIINAAAYT 61 ++LVTG NGQ+G EL R+ + EV A DR DL LR L+R PDVI+N AAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDRAETEQAAAHAINAQAPAVMAEEASALGAALIHYSTDYVFDGRKAGPYLETDPTDPQ 121 AVD+AET+ AA A+N A V+AEEA ALG+ L+HYSTDYVFDG KAG Y+E+D +PQ Sbjct: 70 AVDKAETDADAAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGSKAGAYVESDAVNPQ 129 Query: 122 SVYGKTKLAGEQAIAAASDKFWIWRTSWVYGVHGGNFLKTMLRLASERTSLRVVADQFGA 181 SVYGK+KLAGEQAI A+ + RT WV G HGGNF KTML+L ER SLRV+ADQFGA Sbjct: 130 SVYGKSKLAGEQAITASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTFARAIAEATRDALMAGGNAGTPARVADTAGIYHFTGGGRTNWHGYAQYVIERAAEAGQ 241 PT A IA+ T + +G R A G+YH G T WHGYA V+ A G Sbjct: 190 PTTAALIADVTAQIVARFWLSGD--RAAFPGGLYHLAAAGETTWHGYATAVLRYAKARGL 247 Query: 242 PLNITAADIEAIPASAYPVPAPRPSNSCLSLEKFTQTFGLPIAAWQDDVDRCLAELLA 299 L + IEAIPA+AYP+PAPRP+NS ++ K T+TFG+ + WQ V L ++ + Sbjct: 248 ELKVDPERIEAIPATAYPLPAPRPANSRMNTGKLTETFGIHLPDWQQGVHLLLDQIFS 305 >emb|CCA81026.1| TDP-rhamnose synthetase, NAD(P)-binding [blood disease bacterium R229] Length = 305 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 159/298 (53%), Positives = 197/298 (66%), Gaps = 2/298 (0%) Query: 2 KILVTGKNGQLGSELVRAFRGVAEVAAFDRQTLDLADIGQLRSLIRAQAPDVIINAAAYT 61 ++LVTG NGQ+G EL R+ + EV A DR DL LR L+R PDVI+N AAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDRAETEQAAAHAINAQAPAVMAEEASALGAALIHYSTDYVFDGRKAGPYLETDPTDPQ 121 AVD+AET+ A A+N A V+AEEA ALG+ L+HYSTDYVFDG KAG Y+E+D +PQ Sbjct: 70 AVDKAETDAETAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGSKAGAYVESDAVNPQ 129 Query: 122 SVYGKTKLAGEQAIAAASDKFWIWRTSWVYGVHGGNFLKTMLRLASERTSLRVVADQFGA 181 SVYGK+KLAGEQAIAA+ + RT WV G HGGNF KTML+L ER SLRV+ADQFGA Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTFARAIAEATRDALMAGGNAGTPARVADTAGIYHFTGGGRTNWHGYAQYVIERAAEAGQ 241 PT A IA+ T + +G RVA G+YH G T WHGYA V+ A G Sbjct: 190 PTTAALIADVTAQIVARFWLSGD--RVAFPGGLYHLAAAGETTWHGYATAVLRYAKARGL 247 Query: 242 PLNITAADIEAIPASAYPVPAPRPSNSCLSLEKFTQTFGLPIAAWQDDVDRCLAELLA 299 L + IEAIPA+AYP+PAPRP+NS ++ K T+TFG+ + WQ V L ++ + Sbjct: 248 ELKVDPERIEAIPATAYPLPAPRPANSRMNTAKLTETFGIHLPDWQQGVHLLLDQIFS 305 >emb|CAQ56991.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum MolK2] gb|AEG69980.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum Po82] Length = 305 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 160/298 (53%), Positives = 195/298 (65%), Gaps = 2/298 (0%) Query: 2 KILVTGKNGQLGSELVRAFRGVAEVAAFDRQTLDLADIGQLRSLIRAQAPDVIINAAAYT 61 ++LVTG NGQ+G EL R+ + EV A DR DL LR L+R PDVI+N AAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDRAETEQAAAHAINAQAPAVMAEEASALGAALIHYSTDYVFDGRKAGPYLETDPTDPQ 121 AVD+AET+ A A+N A V+AEEA ALG+ L+HYSTDYVFDG KAG YLETD +PQ Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYLETDAVNPQ 129 Query: 122 SVYGKTKLAGEQAIAAASDKFWIWRTSWVYGVHGGNFLKTMLRLASERTSLRVVADQFGA 181 SVYGK+KLAGEQAIAA+ + RT WV G HGGNF KTML+L ER SLRV+ADQFGA Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTFARAIAEATRDALMAGGNAGTPARVADTAGIYHFTGGGRTNWHGYAQYVIERAAEAGQ 241 PT A IA+ T + +G R A G+YH G T WHGYA V+ A G Sbjct: 190 PTTAALIADVTAQIVARFWLSGD--RAAFPGGLYHLAASGETTWHGYATAVLRYAKARGL 247 Query: 242 PLNITAADIEAIPASAYPVPAPRPSNSCLSLEKFTQTFGLPIAAWQDDVDRCLAELLA 299 L + IEAIPA+AYP+PAPRP+NS + K T+TFG+ + WQ V L ++ + Sbjct: 248 ELKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQIFS 305