BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0619.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEO78270.1| ABC-2 transporter protein [Burkholderia sp. MSMB121] 310 1e-82 gb|ADE44324.1| putative ABC-2 type transporter [Burkholderia pse... 310 1e-82 gb|AEO78250.1| putative ABC-2 transporter [Burkholderia sp. MSMB... 310 2e-82 gb|AEO78369.1| ABC-2 transporter, inner membrane permease [Burkh... 306 2e-81 ref|ZP_03452164.1| ABC-2 type transporter [Burkholderia pseudoma... 305 4e-81 >gb|AEO78270.1| ABC-2 transporter protein [Burkholderia sp. MSMB121] Length = 274 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 165/274 (60%), Positives = 210/274 (76%), Gaps = 1/274 (0%) Query: 1 MIKHKSTPLSMLSGLWNHRVLMLELARREAIGRYKGSLLGVFWSLVTPLFMLTIYTLVFS 60 M ++P+ +L+ L +R LM +LARR+A+GRYKGS LG+ WS++TPL ML++YT VFS Sbjct: 1 MQSFSASPMYLLASLVKNRRLMFDLARRDAVGRYKGSALGILWSMLTPLLMLSVYTFVFS 60 Query: 61 HVFKAKWGGTGDE-SQSQFAIVLFAGLIVFNFFSECIGKAPSLVLNNVNFVKKVVFPLEI 119 VFK++WG S +FA+VLFAG+I+FN FSEC+ +APS+VL N NFVKK+VFPLEI Sbjct: 61 GVFKSRWGNASTPGSHGEFAVVLFAGMIMFNVFSECVNRAPSIVLVNTNFVKKIVFPLEI 120 Query: 120 LPCVNLLSALFHAAVSLLVLVCFEWAVAGHVPVTALYIPLVLLPLAMLIAGASWLLAATG 179 LPC+ LLSALFHA VS+ +L+ E+ + G VPVTAL +P+VL PL +LI G SW+L+ATG Sbjct: 121 LPCICLLSALFHAFVSITILLIAEFLIQGSVPVTALMLPIVLAPLCLLILGISWMLSATG 180 Query: 180 VYLRDIGQTIGIFLTGLMFLSPIFFPTSALPEQWRSLARLNPLAIPIEQARQVLIYGHAP 239 VYLRDIGQTIGIF+T LMFLSPIFFP S+LP R+L NPL PIEQ+R VLI+G + Sbjct: 181 VYLRDIGQTIGIFVTALMFLSPIFFPVSSLPPSVRALVYWNPLTFPIEQSRNVLIWGKSI 240 Query: 240 DWREWLVYAAVAAVTAWFGYFCFQKARKGFADVL 273 DW W Y AV+ + AW G+ FQK RKGFADV+ Sbjct: 241 DWTMWCSYLAVSLIVAWIGFAWFQKTRKGFADVI 274 >gb|ADE44324.1| putative ABC-2 type transporter [Burkholderia pseudomallei] gb|ADQ27810.1| putative ABC-2 type transporter [Burkholderia pseudomallei] gb|ADQ27828.1| putative ABC-2 type transporter [Burkholderia pseudomallei] gb|ADQ27851.1| putative ABC-2 type transporter [Burkholderia pseudomallei] Length = 274 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 165/274 (60%), Positives = 210/274 (76%), Gaps = 1/274 (0%) Query: 1 MIKHKSTPLSMLSGLWNHRVLMLELARREAIGRYKGSLLGVFWSLVTPLFMLTIYTLVFS 60 M ++P+ +L+ L +R LM +LARR+A+GRYKGS LG+ WS++TPL ML++YT VFS Sbjct: 1 MQSFSASPMYLLASLVKNRRLMFDLARRDAVGRYKGSALGILWSMLTPLLMLSVYTFVFS 60 Query: 61 HVFKAKWGGTGDE-SQSQFAIVLFAGLIVFNFFSECIGKAPSLVLNNVNFVKKVVFPLEI 119 VFK++WG S +FA+VLFAG+I FN FSEC+ +APS+VL N NFVKK+VFPLEI Sbjct: 61 GVFKSRWGNASTPGSHGEFAVVLFAGMITFNVFSECVNRAPSIVLVNTNFVKKIVFPLEI 120 Query: 120 LPCVNLLSALFHAAVSLLVLVCFEWAVAGHVPVTALYIPLVLLPLAMLIAGASWLLAATG 179 LPC+ LLSALFHA VS+ +L+ E+ + G VPVTAL +P+VL+PL +LI G SW+L+ATG Sbjct: 121 LPCICLLSALFHAFVSITILLIAEFLIQGSVPVTALMLPIVLVPLCLLILGISWMLSATG 180 Query: 180 VYLRDIGQTIGIFLTGLMFLSPIFFPTSALPEQWRSLARLNPLAIPIEQARQVLIYGHAP 239 VYLRDIGQTIGIF+T LMFLSPIFFP S+LP R+L NPL PIEQ+R VLI+G + Sbjct: 181 VYLRDIGQTIGIFVTALMFLSPIFFPVSSLPPGVRALVYWNPLTFPIEQSRNVLIWGKSI 240 Query: 240 DWREWLVYAAVAAVTAWFGYFCFQKARKGFADVL 273 DW W Y AV+ + AW G+ FQK RKGFADV+ Sbjct: 241 DWAMWCSYLAVSLIVAWIGFAWFQKTRKGFADVI 274 >gb|AEO78250.1| putative ABC-2 transporter [Burkholderia sp. MSMB175] Length = 274 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 165/274 (60%), Positives = 211/274 (77%), Gaps = 1/274 (0%) Query: 1 MIKHKSTPLSMLSGLWNHRVLMLELARREAIGRYKGSLLGVFWSLVTPLFMLTIYTLVFS 60 M ++P+ +L+ L +R LML+LARR+A+GRYKGS LG+ WS++TPL ML++YT VFS Sbjct: 1 MQSFSASPMYLLTSLVKNRRLMLDLARRDAVGRYKGSALGILWSMLTPLLMLSVYTFVFS 60 Query: 61 HVFKAKWGGTGDE-SQSQFAIVLFAGLIVFNFFSECIGKAPSLVLNNVNFVKKVVFPLEI 119 VFK++WG S +FA+VLFAG+I+FN FSEC+ +APS+VL N NFVKK+VFPLEI Sbjct: 61 GVFKSRWGNASTPGSHGEFAVVLFAGMIMFNVFSECVNRAPSIVLVNTNFVKKIVFPLEI 120 Query: 120 LPCVNLLSALFHAAVSLLVLVCFEWAVAGHVPVTALYIPLVLLPLAMLIAGASWLLAATG 179 LPC+ LLSALFHA VS+ +L+ E+ + G VPVTAL +P+VL PL +LI G SW+L+ATG Sbjct: 121 LPCICLLSALFHAFVSITILLIAEFLIQGSVPVTALMLPIVLAPLCLLILGISWILSATG 180 Query: 180 VYLRDIGQTIGIFLTGLMFLSPIFFPTSALPEQWRSLARLNPLAIPIEQARQVLIYGHAP 239 VYLRDIGQTIGIF+T LMFLSPIFFP S+LP ++L NPL PIEQ+R VLI+G + Sbjct: 181 VYLRDIGQTIGIFVTALMFLSPIFFPVSSLPPSVQALVYWNPLTFPIEQSRNVLIWGKSI 240 Query: 240 DWREWLVYAAVAAVTAWFGYFCFQKARKGFADVL 273 DW W Y AV+ + AW G+ FQK RKGFADV+ Sbjct: 241 DWTMWCSYLAVSLIVAWIGFAWFQKTRKGFADVI 274 >gb|AEO78369.1| ABC-2 transporter, inner membrane permease [Burkholderia pseudomallei] Length = 330 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 163/274 (59%), Positives = 209/274 (76%), Gaps = 1/274 (0%) Query: 1 MIKHKSTPLSMLSGLWNHRVLMLELARREAIGRYKGSLLGVFWSLVTPLFMLTIYTLVFS 60 M ++P+ +L+ L +R LM +LARR+A+GRYKGS LG+FWS++TPL ML++YT VFS Sbjct: 57 MQSFSASPMYLLTSLVKNRRLMFDLARRDAVGRYKGSALGIFWSMLTPLLMLSVYTFVFS 116 Query: 61 HVFKAKWGGTGDE-SQSQFAIVLFAGLIVFNFFSECIGKAPSLVLNNVNFVKKVVFPLEI 119 VFK++WG S +FAIVLFAG++ FN FSEC+ +APS+VL N NFVKK+VFPLEI Sbjct: 117 GVFKSRWGNQSTPGSHGEFAIVLFAGMLTFNIFSECVNRAPSIVLANTNFVKKIVFPLEI 176 Query: 120 LPCVNLLSALFHAAVSLLVLVCFEWAVAGHVPVTALYIPLVLLPLAMLIAGASWLLAATG 179 LPCV LLSALFHA VS+ +L+ E+ + GH+P TAL +P+VL+PL +LI G SWLL+ATG Sbjct: 177 LPCVTLLSALFHAFVSVTILLVAEFLIQGHIPATALLLPVVLVPLCLLILGISWLLSATG 236 Query: 180 VYLRDIGQTIGIFLTGLMFLSPIFFPTSALPEQWRSLARLNPLAIPIEQARQVLIYGHAP 239 VYLRDIGQTIGIF+T LMFLSPIFFP S+LP ++ NPL PIEQ+R VLI+G Sbjct: 237 VYLRDIGQTIGIFVTALMFLSPIFFPASSLPANFQRFIYWNPLTFPIEQSRNVLIWGKPI 296 Query: 240 DWREWLVYAAVAAVTAWFGYFCFQKARKGFADVL 273 DW W +Y A+ + +W G+ FQK RKGFADV+ Sbjct: 297 DWSIWTIYLAIGLIASWIGFAWFQKTRKGFADVI 330 >ref|ZP_03452164.1| ABC-2 type transporter [Burkholderia pseudomallei 576] gb|EEC36088.1| ABC-2 type transporter [Burkholderia pseudomallei 576] Length = 331 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 163/274 (59%), Positives = 209/274 (76%), Gaps = 1/274 (0%) Query: 1 MIKHKSTPLSMLSGLWNHRVLMLELARREAIGRYKGSLLGVFWSLVTPLFMLTIYTLVFS 60 M ++P+ +L+ L +R LM +LARR+A+GRYKGS LG+FWS++TPL ML++YT VFS Sbjct: 58 MQSFSASPMYLLTSLVKNRRLMFDLARRDAVGRYKGSALGIFWSMLTPLLMLSVYTFVFS 117 Query: 61 HVFKAKWGGTGDE-SQSQFAIVLFAGLIVFNFFSECIGKAPSLVLNNVNFVKKVVFPLEI 119 VFK++WG S +FAIVLFAG++ FN FSEC+ +APS+VL N NFVKK+VFPLEI Sbjct: 118 GVFKSRWGNQSTPGSHGEFAIVLFAGMLTFNIFSECVNRAPSIVLANTNFVKKIVFPLEI 177 Query: 120 LPCVNLLSALFHAAVSLLVLVCFEWAVAGHVPVTALYIPLVLLPLAMLIAGASWLLAATG 179 LPCV LLSALFHA VS+ +L+ E+ + GH+P TAL +P+VL+PL +LI G SWLL+ATG Sbjct: 178 LPCVTLLSALFHAFVSVTILLVAEFLIQGHIPATALLLPVVLVPLCLLILGISWLLSATG 237 Query: 180 VYLRDIGQTIGIFLTGLMFLSPIFFPTSALPEQWRSLARLNPLAIPIEQARQVLIYGHAP 239 VYLRDIGQTIGIF+T LMFLSPIFFP S+LP ++ NPL PIEQ+R VLI+G Sbjct: 238 VYLRDIGQTIGIFVTALMFLSPIFFPASSLPASFQRFIYWNPLTFPIEQSRNVLIWGKPI 297 Query: 240 DWREWLVYAAVAAVTAWFGYFCFQKARKGFADVL 273 DW W +Y A+ + +W G+ FQK RKGFADV+ Sbjct: 298 DWSIWAIYLAIGLIASWIGFAWFQKTRKGFADVI 331