BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0618.p (458 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08484725.1| ABC transporter-like protein [Methylomicrobiu... 567 e-159 ref|YP_442020.1| polysaccharide ABC transporter ATP-binding prot... 529 e-148 ref|YP_992268.1| putative lipopolysaccharide ABC transporter, AT... 524 e-146 gb|AAK27396.1| putative ABC-2 transporter hydrophilic component ... 524 e-146 ref|YP_109277.1| ABC transporter ATP-binding protein [Burkholder... 523 e-146 >ref|ZP_08484725.1| ABC transporter-like protein [Methylomicrobium album BG8] gb|EGL04408.1| ABC transporter-like protein [Methylomicrobium album BG8] Length = 457 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 268/456 (58%), Positives = 345/456 (75%), Gaps = 9/456 (1%) Query: 1 MSSDIAIRVSGVSKSFNTYERPADRLTQAVLAGLARIVPVPGLRQRLGQRAHQLARKHHA 60 M S+IAI+V +SK + Y++P DRL Q++ P L+ GQ+ Q R+ A Sbjct: 1 MCSEIAIQVDNLSKCYQIYDKPQDRLKQSIY---------PRLQYLAGQKPKQYFREFWA 51 Query: 61 LSDISLEIRKGETVGIIGRNGSGKSTLLQIICGTLNPSAGSVEVKGRVAALLELGSGFNP 120 L ++S EI+KGETVGIIGRNGSGKSTLLQ+ICGTLNP++G++ V GR+AALLELGSGFNP Sbjct: 52 LRNVSFEIKKGETVGIIGRNGSGKSTLLQLICGTLNPTSGNLRVHGRIAALLELGSGFNP 111 Query: 121 EYSGRENVFMNGQLLGLTRQQIEARFKDIEAFADIGDFMDQPVKAYSSGMYVRLAFAVIA 180 E++GRENV++N +LGL++++ +ARF DI AFADIGDF++QPVK YSSGM +RLAFAVIA Sbjct: 112 EFTGRENVYINAAVLGLSQKETDARFDDIIAFADIGDFIEQPVKTYSSGMMLRLAFAVIA 171 Query: 181 HVDADILVIDEALAVGDAFFTQKCMRFLRGFMKTGTVLFVSHDTASIKNLCTHAVWIDRG 240 H+DADIL+IDEALAVGDAFFTQKCMRFLR FM++GTV FVSHDT S++NLCTHA+W+++G Sbjct: 172 HIDADILIIDEALAVGDAFFTQKCMRFLRRFMQSGTVFFVSHDTGSVRNLCTHAIWLEKG 231 Query: 241 HMRSAGEPRHVCDLYLQEFYEAQQGKSAVAKVARSSIRAEGPSVDVRRDKINASNLRNDL 300 + G P+ +C+ YL+ FYEAQQGKSA+ S + + D RR+ IN SNLRND+ Sbjct: 232 SIVRQGPPKEICENYLEAFYEAQQGKSAIPAKIDSVDHSMTHAKDQRREFINTSNLRNDI 291 Query: 301 QVFTFDPEAAALGSGGAAITDVSFVGEDGERLNWVVGGEAVTLAISITAVDSLRSPIVGF 360 ++F F+PEA + G G A I V F+ ++G L WVVGGE V L I A L SPI+GF Sbjct: 292 RLFEFNPEAPSFGKGEAQIVSVKFLDKEGNPLAWVVGGEEVALRIEARAHSPLDSPIIGF 351 Query: 361 FVKDKLGQTLFGENTYLSYESDPVPCAAGEQLQARFEFRMPILPNGQYSINVAVAEGTQD 420 F+KDKLGQ LFG+NTYLSY PV C G+ + A F F+MP L G YSI VA+A GTQ+ Sbjct: 352 FIKDKLGQYLFGDNTYLSYIDSPVVCTEGQCIIADFSFQMPRLFAGDYSITVAIANGTQN 411 Query: 421 EHVQLHWIHDALIFKSESSSVSSGLVGIPMQAIVLE 456 +H+Q HW+HDA+ F+SES+SV+ GL+GIPM I L+ Sbjct: 412 DHIQHHWMHDAIFFRSESTSVAGGLIGIPMNNIKLK 447 >ref|YP_442020.1| polysaccharide ABC transporter ATP-binding protein [Burkholderia thailandensis E264] gb|ABC39249.1| polysaccharide ABC transporter, ATP-binding protein [Burkholderia thailandensis E264] gb|AEO78434.1| ABC-2 transporter, ATP-binding protein [Burkholderia thailandensis] gb|AEO78450.1| polysaccharide ABC transporter, ATP-binding protein [Burkholderia thailandensis] Length = 469 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 277/465 (59%), Positives = 337/465 (72%), Gaps = 16/465 (3%) Query: 1 MSSDI-AIRVSGVSKSFNTYERPADRLTQAV---LAGLARIVPVPGLRQRLGQRAHQLAR 56 MSS++ AI V VSK F + +PADRL AV + GLA++VP + LG A Sbjct: 1 MSSELPAISVQDVSKHFRVFAKPADRLKAAVRHRIGGLAKLVPA----RLLGTEG---AS 53 Query: 57 KHHALSDISLEIRKGETVGIIGRNGSGKSTLLQIICGTLNPSAGSVEVKGRVAALLELGS 116 + HAL +S ++KGET+GIIGRNGSGKSTLLQIICGTL PS G V + GRVAALLELG+ Sbjct: 54 EFHALQHVSFHVQKGETIGIIGRNGSGKSTLLQIICGTLTPSGGRVAINGRVAALLELGA 113 Query: 117 GFNPEYSGRENVFMNGQLLGLTRQQIEARFKDIEAFADIGDFMDQPVKAYSSGMYVRLAF 176 GFNPE++GRENVFMN LLGL++ QIE R I AFADIGDF+DQPVK YSSGMYVRLAF Sbjct: 114 GFNPEFTGRENVFMNAALLGLSKAQIEERLDAIFAFADIGDFVDQPVKTYSSGMYVRLAF 173 Query: 177 AVIAHVDADILVIDEALAVGDAFFTQKCMRFLRGFMKTGTVLFVSHDTASIKNLCTHAVW 236 AVIAHVDAD+LVIDEALAVGDAFFTQKCMRFLR FM+ GTVLFVSHDT ++ NLCT VW Sbjct: 174 AVIAHVDADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVW 233 Query: 237 IDRGHMRSAGEPRHVCDLYLQEFYEAQQ---GKSAVAKVARSSIR--AEGPSVDVRRDKI 291 +D+G +R G + VCD YL+ FYE Q G+SA A S +R AEG D R + Sbjct: 234 LDKGRVREIGPAKDVCDSYLEAFYEEQHRASGRSAHAPERSSVVRAIAEGDMRDQRALLV 293 Query: 292 NASNLRNDLQVFTFDPEAAALGSGGAAITDVSFVGEDGERLNWVVGGEAVTLAISITAVD 351 NAS LRND+++F F +A G GGA+I V G LNWVVGGE V + I++ A+ Sbjct: 294 NASKLRNDVELFQFTADAKNFGLGGASIEHVGIEDGTGASLNWVVGGEIVCIRIAVKALQ 353 Query: 352 SLRSPIVGFFVKDKLGQTLFGENTYLSYESDPVPCAAGEQLQARFEFRMPILPNGQYSIN 411 +L+ IVGF V+D+LGQ LFG+NTYL+ ++P AAGE RF FRMP+LP G YS+ Sbjct: 354 NLQRAIVGFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGFRMPVLPVGDYSVT 413 Query: 412 VAVAEGTQDEHVQLHWIHDALIFKSESSSVSSGLVGIPMQAIVLE 456 VAVA+G+Q +HV W+HDA++ KS S+SVS+GL+GIPM IVLE Sbjct: 414 VAVADGSQSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLE 458 >ref|YP_992268.1| putative lipopolysaccharide ABC transporter, ATP-binding protein [Burkholderia mallei SAVP1] ref|ZP_04882239.1| putative lipopolysaccharide ABC transporter, ATP-binding protein [Burkholderia mallei ATCC 10399] ref|ZP_04908625.1| putative lipopolysaccharide ABC transporter, ATP-binding protein Wzt [Burkholderia mallei FMH] gb|ABM50952.1| putative lipopolysaccharide ABC transporter, ATP-binding protein [Burkholderia mallei SAVP1] gb|EDK53586.1| putative lipopolysaccharide ABC transporter, ATP-binding protein Wzt [Burkholderia mallei FMH] gb|EDP86593.1| putative lipopolysaccharide ABC transporter, ATP-binding protein [Burkholderia mallei ATCC 10399] Length = 471 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 275/465 (59%), Positives = 335/465 (72%), Gaps = 16/465 (3%) Query: 1 MSSDI-AIRVSGVSKSFNTYERPADRLTQAV---LAGLARIVPVPGLRQRLGQRAHQLAR 56 MSS++ AI V VSK F + +PADRL AV + GLA++VP + LG A Sbjct: 3 MSSELPAISVQDVSKRFRVFAKPADRLKAAVRHRIGGLAKLVPA----RLLGTEG---AS 55 Query: 57 KHHALSDISLEIRKGETVGIIGRNGSGKSTLLQIICGTLNPSAGSVEVKGRVAALLELGS 116 + HAL +S ++KGET+GIIGRNGSGKSTLLQIICGTL PS G V + GRVAALLELG+ Sbjct: 56 EFHALQHVSFHVQKGETIGIIGRNGSGKSTLLQIICGTLTPSGGRVAINGRVAALLELGA 115 Query: 117 GFNPEYSGRENVFMNGQLLGLTRQQIEARFKDIEAFADIGDFMDQPVKAYSSGMYVRLAF 176 GFNPE++GRENV+MN LLGL++ QIE R I AFADIG F+DQPVK YSSGMYVRLAF Sbjct: 116 GFNPEFTGRENVYMNAALLGLSKAQIEERLDAIFAFADIGGFVDQPVKTYSSGMYVRLAF 175 Query: 177 AVIAHVDADILVIDEALAVGDAFFTQKCMRFLRGFMKTGTVLFVSHDTASIKNLCTHAVW 236 AVIAHVDAD+LVIDEALAVGDAFFTQKCMRFLR FM+ GTVLFVSHDT ++ NLCT VW Sbjct: 176 AVIAHVDADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVW 235 Query: 237 IDRGHMRSAGEPRHVCDLYLQEFYEAQQGKS--AVAKVARSSIR---AEGPSVDVRRDKI 291 +D+G +R G + VCD YL+ FYE Q S +V + RSS+ AEG D R I Sbjct: 236 LDKGRVREIGPAKDVCDSYLEAFYEEQHCASGRSVRALERSSVVRAIAEGDMRDQRALLI 295 Query: 292 NASNLRNDLQVFTFDPEAAALGSGGAAITDVSFVGEDGERLNWVVGGEAVTLAISITAVD 351 NAS LRND+++F F +A G GGA+I V G LNWVVGGE V + I++ A+ Sbjct: 296 NASKLRNDVELFQFTADAKNFGLGGASIEHVGIEDGTGAPLNWVVGGEIVCIRIAVKALQ 355 Query: 352 SLRSPIVGFFVKDKLGQTLFGENTYLSYESDPVPCAAGEQLQARFEFRMPILPNGQYSIN 411 +L IVGF V+D+LGQ LFG+NTYL+ ++P AAGE RF FRMP+LP G YS+ Sbjct: 356 NLERAIVGFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGFRMPVLPVGDYSVT 415 Query: 412 VAVAEGTQDEHVQLHWIHDALIFKSESSSVSSGLVGIPMQAIVLE 456 VAVA+G+Q +HV W+HDA++ KS S+SVS+GL+GIPM IVLE Sbjct: 416 VAVADGSQSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLE 460 >gb|AAK27396.1| putative ABC-2 transporter hydrophilic component [Burkholderia mallei] gb|AEO78285.1| polysaccharide ABC transporter, ATPase subunit [Burkholderia mallei] gb|AEO78301.1| polysaccharide ABC transporter, ATPase subunit [Burkholderia mallei] gb|AEO78321.1| polysaccharide ABC transporter, ATPase subunit [Burkholderia mallei] Length = 469 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 275/465 (59%), Positives = 335/465 (72%), Gaps = 16/465 (3%) Query: 1 MSSDI-AIRVSGVSKSFNTYERPADRLTQAV---LAGLARIVPVPGLRQRLGQRAHQLAR 56 MSS++ AI V VSK F + +PADRL AV + GLA++VP + LG A Sbjct: 1 MSSELPAISVQDVSKRFRVFAKPADRLKAAVRHRIGGLAKLVPA----RLLGTEG---AS 53 Query: 57 KHHALSDISLEIRKGETVGIIGRNGSGKSTLLQIICGTLNPSAGSVEVKGRVAALLELGS 116 + HAL +S ++KGET+GIIGRNGSGKSTLLQIICGTL PS G V + GRVAALLELG+ Sbjct: 54 EFHALQHVSFHVQKGETIGIIGRNGSGKSTLLQIICGTLTPSGGRVAINGRVAALLELGA 113 Query: 117 GFNPEYSGRENVFMNGQLLGLTRQQIEARFKDIEAFADIGDFMDQPVKAYSSGMYVRLAF 176 GFNPE++GRENV+MN LLGL++ QIE R I AFADIG F+DQPVK YSSGMYVRLAF Sbjct: 114 GFNPEFTGRENVYMNAALLGLSKAQIEERLDAIFAFADIGGFVDQPVKTYSSGMYVRLAF 173 Query: 177 AVIAHVDADILVIDEALAVGDAFFTQKCMRFLRGFMKTGTVLFVSHDTASIKNLCTHAVW 236 AVIAHVDAD+LVIDEALAVGDAFFTQKCMRFLR FM+ GTVLFVSHDT ++ NLCT VW Sbjct: 174 AVIAHVDADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVW 233 Query: 237 IDRGHMRSAGEPRHVCDLYLQEFYEAQQGKS--AVAKVARSSIR---AEGPSVDVRRDKI 291 +D+G +R G + VCD YL+ FYE Q S +V + RSS+ AEG D R I Sbjct: 234 LDKGRVREIGPAKDVCDSYLEAFYEEQHCASGRSVRALERSSVVRAIAEGDMRDQRALLI 293 Query: 292 NASNLRNDLQVFTFDPEAAALGSGGAAITDVSFVGEDGERLNWVVGGEAVTLAISITAVD 351 NAS LRND+++F F +A G GGA+I V G LNWVVGGE V + I++ A+ Sbjct: 294 NASKLRNDVELFQFTADAKNFGLGGASIEHVGIEDGTGAPLNWVVGGEIVCIRIAVKALQ 353 Query: 352 SLRSPIVGFFVKDKLGQTLFGENTYLSYESDPVPCAAGEQLQARFEFRMPILPNGQYSIN 411 +L IVGF V+D+LGQ LFG+NTYL+ ++P AAGE RF FRMP+LP G YS+ Sbjct: 354 NLERAIVGFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGFRMPVLPVGDYSVT 413 Query: 412 VAVAEGTQDEHVQLHWIHDALIFKSESSSVSSGLVGIPMQAIVLE 456 VAVA+G+Q +HV W+HDA++ KS S+SVS+GL+GIPM IVLE Sbjct: 414 VAVADGSQSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLE 458 >ref|YP_109277.1| ABC transporter ATP-binding protein [Burkholderia pseudomallei K96243] ref|YP_334531.1| polysaccharide ABC transporter ATP-binding protein [Burkholderia pseudomallei 1710b] ref|ZP_02507254.1| polysaccharide ABC transporter, ATP-binding protein [Burkholderia pseudomallei BCC215] ref|ZP_04902485.1| putative lipopolysaccharide ABC transporter, ATP-binding protein [Burkholderia pseudomallei S13] gb|AAD05459.1| putative ABC-2 transporter hydrophilic component [Burkholderia pseudomallei 1026b] emb|CAH36689.1| ABC transporter, ATP-binding component [Burkholderia pseudomallei K96243] gb|ABA48875.1| polysaccharide ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1710b] gb|EDS85497.1| putative lipopolysaccharide ABC transporter, ATP-binding protein [Burkholderia pseudomallei S13] Length = 469 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 275/465 (59%), Positives = 334/465 (71%), Gaps = 16/465 (3%) Query: 1 MSSDI-AIRVSGVSKSFNTYERPADRLTQAV---LAGLARIVPVPGLRQRLGQRAHQLAR 56 MSS++ AI V VSK F + +PADRL AV + GLA++VP + LG A Sbjct: 1 MSSELPAISVQDVSKRFRVFAKPADRLKAAVRHRIGGLAKLVPA----RLLGTEG---AS 53 Query: 57 KHHALSDISLEIRKGETVGIIGRNGSGKSTLLQIICGTLNPSAGSVEVKGRVAALLELGS 116 + HAL +S ++KGET+GIIGRNGSGKSTLLQIICGTL PS G V + GRVAALLELG+ Sbjct: 54 EFHALQHVSFHVQKGETIGIIGRNGSGKSTLLQIICGTLTPSGGRVAINGRVAALLELGA 113 Query: 117 GFNPEYSGRENVFMNGQLLGLTRQQIEARFKDIEAFADIGDFMDQPVKAYSSGMYVRLAF 176 GFNPE++GRENV+MN LLGL++ QIE R I AFADIG F+DQPVK YSSGMYVRLAF Sbjct: 114 GFNPEFTGRENVYMNAALLGLSKAQIEERLDAIFAFADIGGFVDQPVKTYSSGMYVRLAF 173 Query: 177 AVIAHVDADILVIDEALAVGDAFFTQKCMRFLRGFMKTGTVLFVSHDTASIKNLCTHAVW 236 AVIAHVDAD+LVIDEALAVGDAFFTQKCMRFLR FM+ GTVLFVSHDT ++ NLCT VW Sbjct: 174 AVIAHVDADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVW 233 Query: 237 IDRGHMRSAGEPRHVCDLYLQEFYEAQQGKSA--VAKVARSSIR---AEGPSVDVRRDKI 291 +D+G +R G + VCD YL+ FYE Q S V + RSS+ AEG D R I Sbjct: 234 LDKGRVREIGPAKDVCDSYLEAFYEEQHRASGRNVRALERSSVVRAIAEGDMRDQRALLI 293 Query: 292 NASNLRNDLQVFTFDPEAAALGSGGAAITDVSFVGEDGERLNWVVGGEAVTLAISITAVD 351 NAS LRND+++F F +A G GGA+I V G LNWVVGGE V + I++ A+ Sbjct: 294 NASKLRNDVELFQFTADAKNFGLGGASIEHVGIEDGTGAPLNWVVGGEIVCIRIAVKALQ 353 Query: 352 SLRSPIVGFFVKDKLGQTLFGENTYLSYESDPVPCAAGEQLQARFEFRMPILPNGQYSIN 411 +L IVGF V+D+LGQ LFG+NTYL+ ++P AAGE RF FRMP+LP G YS+ Sbjct: 354 NLERAIVGFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGFRMPVLPVGDYSVT 413 Query: 412 VAVAEGTQDEHVQLHWIHDALIFKSESSSVSSGLVGIPMQAIVLE 456 VAVA+G+Q +HV W+HDA++ KS S+SVS+GL+GIPM IVLE Sbjct: 414 VAVADGSQSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLE 458