BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0611.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01978992.1| hypothetical protein A5A_0244 [Vibrio cholera... 129 4e-28 gb|ABI85336.1| putative acetyl transferase by domain [Vibrio cho... 121 7e-26 ref|YP_004617999.1| hypothetical protein Rta_08966 [Ramlibacter ... 93 2e-17 ref|YP_002433462.1| hypothetical protein Dalk_4314 [Desulfatibac... 68 1e-09 ref|YP_862033.1| hypothetical protein GFO_2001 [Gramella forseti... 64 2e-08 >ref|ZP_01978992.1| hypothetical protein A5A_0244 [Vibrio cholerae MZO-2] gb|EDM54081.1| hypothetical protein A5A_0244 [Vibrio cholerae MZO-2] Length = 293 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 13/226 (5%) Query: 1 MEIELIESDTARMDDYIALYQACFPQADKLRRQYLNWLYIDNPEGRALGADAVCDGKVIG 60 +E +E + + + L + CFP++ K YL WLY+DNP GRA+G +A + +++G Sbjct: 4 IEYRPLELSDVEISNIVTLLKKCFPKSAKFSNDYLKWLYVDNPNGRAIGFNAYINQELVG 63 Query: 61 QVIALPGRYRLRGRQVRGLVAVNVAVHPDFQGKHLFKRLGLKMCEFGALRGFEFVIGVAN 120 +P + G +GL+++N A HP+ QGK LF++L + + ++FV GVAN Sbjct: 64 HYSCIPMLASVSGESQKGLLSLNTATHPNHQGKGLFRKLANETYKLAKDIDYKFVCGVAN 123 Query: 121 AAATPGWVRQMGFQLVGPLQARVGLGALNARACEEGLAQADLFQE----WGDAALQWRSK 176 + ++ +V+ + FQ V PL+ ++ G++ E L D F E W L+WR Sbjct: 124 SRSSLLFVKLLKFQHVAPLEVKLSFGSV---LDVENLKNVDDFAEFSTQWDSKTLEWRMS 180 Query: 177 SPVN--PVALKRGADGQLRVFASAGKPGMT--ALAVLPPGGDAQVA 218 +PVN V LK G+ RVFA+ P + +A+L DA A Sbjct: 181 NPVNVCRVGLKNGSSA--RVFANTEYPFIVNDGIALLGNDSDADYA 224 >gb|ABI85336.1| putative acetyl transferase by domain [Vibrio cholerae] Length = 227 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 7/184 (3%) Query: 1 MEIELIESDTARMDDYIALYQACFPQADKLRRQYLNWLYIDNPEGRALGADAVCDGKVIG 60 +E +E + + + L + CFP++ K YL WLY+DNP GRA+G +A + +++G Sbjct: 4 IEYRPLELSDVEISNIVTLLKKCFPKSAKFSNDYLKWLYVDNPNGRAIGFNAYINQELVG 63 Query: 61 QVIALPGRYRLRGRQVRGLVAVNVAVHPDFQGKHLFKRLGLKMCEFGALRGFEFVIGVAN 120 +P + G +GL+++N A HP+ QGK LF++L + + ++FV GVAN Sbjct: 64 HYSCIPMLASVSGESQKGLLSLNTATHPNHQGKGLFRKLANETYKLAKDIDYKFVCGVAN 123 Query: 121 AAATPGWVRQMGFQLVGPLQARVGLGALNARACEEGLAQADLFQE----WGDAALQWRSK 176 + ++ +V+ + FQ V PL+ ++ G++ E L D F E W L+WR Sbjct: 124 SRSSLLFVKLLKFQHVAPLEVKLSFGSV---LDVENLKNVDDFAEFSTQWDSKTLEWRMS 180 Query: 177 SPVN 180 +PVN Sbjct: 181 NPVN 184 >ref|YP_004617999.1| hypothetical protein Rta_08966 [Ramlibacter tataouinensis TTB310] gb|AEG91980.1| Hypothetical protein Rta_08966 [Ramlibacter tataouinensis TTB310] Length = 292 Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 97/219 (44%), Gaps = 26/219 (11%) Query: 24 FPQADKLRRQYLNWLYIDNPEGRALGADAVCDGKVIGQVIALPGRYRLRGRQVRGLVAVN 83 FP+ L +YL+WLY +P+G + +D GK++G +P R+ + G +++N Sbjct: 2 FPEG-ALTFEYLDWLYRKSPDGLNISSDYTEAGKLLGHYTMVPQRWIIGGESKLMALSLN 60 Query: 84 VAVHPDFQGKHLFKRLGLKMCEFGALRGFEFVIGVANAAATPGWVRQMGFQLVGPLQARV 143 AVH + +GK LF RL + A G ++GVANA +TPG+V+++GF LV PL Sbjct: 61 TAVHEEARGKGLFVRLAEETYSIAARHGIRGIVGVANANSTPGFVKRLGFTLVSPLPVVA 120 Query: 144 G------LGALNARACEEGLAQADLF----------------QEWGDAALQWRSKSPVNP 181 G L A + + F QEW L+WR SP Sbjct: 121 GVALPVPLHAASNHTVNAAFLNSKQFTLLTARLHFNRPGGAAQEWSIDKLRWRLSSPKCQ 180 Query: 182 VALKRGADGQLRVFASAGKPG---MTALAVLPPGGDAQV 217 AL G L + G G + AL P QV Sbjct: 181 YALHAHKSGVLVTTTATGPLGARVVIALKFFPSNEVDQV 219 >ref|YP_002433462.1| hypothetical protein Dalk_4314 [Desulfatibacillum alkenivorans AK-01] gb|ACL05994.1| hypothetical protein Dalk_4314 [Desulfatibacillum alkenivorans AK-01] Length = 333 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 3/137 (2%) Query: 17 IALYQACFPQADKLRRQY--LNWLYIDNPEGRALGADAVCDGKVIGQVIALPGRYRLRGR 74 +AL +A F Q D +R + W +++NP GR A G+++GQ A+P R + G Sbjct: 17 LALRRAVFGQVDPVRARLNAWKWQFLNNPAGRGFIMLAEDQGRIVGQYAAIPVRMLVGGV 76 Query: 75 QVRGLVAVNVAVHPDFQGKHLFKRLGLKM-CEFGALRGFEFVIGVANAAATPGWVRQMGF 133 + + + VHP QG+ +F L ++ + G V G N + PG+ R +G+ Sbjct: 77 ETLCGYSCDTMVHPRCQGRRIFTSLARQVYAHMESEHGIGAVWGFPNKNSMPGFTRSLGW 136 Query: 134 QLVGPLQARVGLGALNA 150 + VG L ARVG + +A Sbjct: 137 RRVGDLLARVGFTSFSA 153 >ref|YP_862033.1| hypothetical protein GFO_2001 [Gramella forsetii KT0803] emb|CAL66966.1| hypothetical protein GFO_2001 [Gramella forsetii KT0803] Length = 313 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 4/144 (2%) Query: 3 IELIESDTARMDDYIALYQACFPQAD-KLRRQYLNWLYIDNPEGRALGADAVCDGKVIGQ 61 +E+ E+D + + + + +A + +L + + +IDNP G ++ A D K++G Sbjct: 1 MEIKEADLNDIPEIVEVLKASLGEEQLELSEKVWRYKHIDNPFGSSVILIAKEDNKIVGV 60 Query: 62 VIALPGRYRLRGRQVRGLVAVNVAVHPDFQGKHLFKRLGLKMCEFGALRGFEFVIGVANA 121 + +++ ++ L AV+ A HP+ QGK +FK+L L+ +F F+ N Sbjct: 61 RAFMRWQWQHGDKKYHALRAVDTATHPNHQGKGIFKKLTLRAVDFSRSNDDNFIFNTPNE 120 Query: 122 AATPGWVRQMGFQLVGPLQARVGL 145 + PG+++ MG++ VG +Q VGL Sbjct: 121 QSRPGYLK-MGWEQVGNIQ--VGL 141