BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0605.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002552041.1| gdp-mannose 4,6-dehydratase [Acidovorax ebre... 608 e-172 ref|YP_550804.1| GDP-mannose 4,6-dehydratase [Polaromonas sp. JS... 608 e-172 ref|YP_002942676.1| GDP-mannose 4,6-dehydratase [Variovorax para... 605 e-171 ref|YP_365449.1| GDP-mannose 4,6-dehydratase [Xanthomonas campes... 600 e-169 ref|ZP_08405574.1| GDP-mannose 4,6-dehydratase [Hylemonella grac... 598 e-169 >ref|YP_002552041.1| gdp-mannose 4,6-dehydratase [Acidovorax ebreus TPSY] gb|ACM32041.1| GDP-mannose 4,6-dehydratase [Acidovorax ebreus TPSY] Length = 346 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 285/343 (83%), Positives = 318/343 (92%) Query: 2 KTAIITGISGQDGAYLAQLLLEKNYVVYGTYRRTSSVNFWRINELGIQDHPNLHLVEFDL 61 K AIITGI+GQDGAYL QLLL+K Y VYGTYRRTSSVNFWRI ELGIQ+H LHL+E+DL Sbjct: 4 KQAIITGITGQDGAYLTQLLLDKGYTVYGTYRRTSSVNFWRIEELGIQNHSKLHLIEYDL 63 Query: 62 TDLGTTLSLVQKVQPDEIYNLAAQSFVGVSFEQPTTTAHITGLGALNILEAIRLVNPRIR 121 TDLG +++LVQKVQPDEIYNLAAQSFVGVSF+QP+TTA ITG+GALN+LEAIRLVN +IR Sbjct: 64 TDLGASIALVQKVQPDEIYNLAAQSFVGVSFDQPSTTAQITGIGALNLLEAIRLVNRKIR 123 Query: 122 FYQASTSEMFGKVQEIPQRESTPFYPRSPYGVAKLYAHWMTINYRESYNIFGTSGILFNH 181 FYQASTSEMFGKVQ IPQ E TPFYPRSPYGVAKLYAHWMT+NYRESY+IFG+SGILFNH Sbjct: 124 FYQASTSEMFGKVQAIPQVEDTPFYPRSPYGVAKLYAHWMTVNYRESYDIFGSSGILFNH 183 Query: 182 ESPLRGREFVTRKITDSVAKIKLGQLDCLELGNLDAKRDWGFAKEYVEGMWRMLQVDEPD 241 ESPLRGREFVTRKITDSVAKIKLG+LD LELGNLDAKRDWGFAKEYVEGMWRMLQ DEPD Sbjct: 184 ESPLRGREFVTRKITDSVAKIKLGKLDVLELGNLDAKRDWGFAKEYVEGMWRMLQADEPD 243 Query: 242 TFVLATNRTETVRDFVQMAFKGVGINLEFRGAAEQETAVDVATGKTVMRINPKFYRPAEV 301 TFVLATNRTETVRDFV+MAFKG GI ++F+G+AE ETAVD +GKTV+R+NPKFYRPAEV Sbjct: 244 TFVLATNRTETVRDFVRMAFKGAGITVDFKGSAESETAVDTTSGKTVVRVNPKFYRPAEV 303 Query: 302 ELLIGDPTRAREILGWQPQTTLEQLCALMVEADVRRNQAGTSF 344 +LLIG+P +A+ LGW+P+TTLEQLC +MVEAD+RRNQAG SF Sbjct: 304 DLLIGNPAKAKAKLGWEPKTTLEQLCQMMVEADLRRNQAGFSF 346 >ref|YP_550804.1| GDP-mannose 4,6-dehydratase [Polaromonas sp. JS666] gb|ABE45906.1| GDP-mannose 4,6-dehydratase [Polaromonas sp. JS666] Length = 357 Score = 608 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 288/357 (80%), Positives = 319/357 (89%), Gaps = 13/357 (3%) Query: 1 MKTAIITGISGQDGAYLAQLLLEKNYVVYGTYRRTSSVNFWRINELGIQDHPNLHLVEFD 60 MK AIITGISGQDGAYL QLLL+K Y VYGTYRRTSSVNFWRI ELGI+DHPNLHLVE+D Sbjct: 1 MKKAIITGISGQDGAYLTQLLLDKGYTVYGTYRRTSSVNFWRIEELGIKDHPNLHLVEYD 60 Query: 61 LTDLGTTLSLVQKVQPDEIYNLAAQSFVGVSFEQPTTTAHITGLGALNILEAIRLVNPRI 120 LTDLG+ ++LVQKVQPDEIYNLAAQSFVGVSF+QPTTTA ITG+GALN+LEAIRLVNP+I Sbjct: 61 LTDLGSNIALVQKVQPDEIYNLAAQSFVGVSFDQPTTTAQITGIGALNLLEAIRLVNPKI 120 Query: 121 RFYQASTSEMFGKVQEIPQRESTPFYPRSPYGVAKLYAHWMTINYRESYNIFGTSGILFN 180 RFYQASTSEMFGKVQ IPQ E TPFYPRSPYGVAKLYAHWMT+NYRESYNIFG+SGILFN Sbjct: 121 RFYQASTSEMFGKVQAIPQVEDTPFYPRSPYGVAKLYAHWMTVNYRESYNIFGSSGILFN 180 Query: 181 HESPLRGREFVTRKITDSVAKIKLGQLDCLELGNLDAKRDWGFAKEYVEGMWRMLQVDEP 240 HESPLRGREFVTRKITDSVAKIKLG+LDC++LGN+DAKRDWGFAKEYVEGMWRMLQ DEP Sbjct: 181 HESPLRGREFVTRKITDSVAKIKLGKLDCMDLGNIDAKRDWGFAKEYVEGMWRMLQADEP 240 Query: 241 DTFVLATNRTETVRDFVQMAFKGVGINLEFRGA-------------AEQETAVDVATGKT 287 DTFVLATNRTETVRDFV+MAFKG GI +EF+G+ A + ++ G+T Sbjct: 241 DTFVLATNRTETVRDFVRMAFKGAGIAVEFKGSAEAETAVVAALTPALAQGERELKVGQT 300 Query: 288 VMRINPKFYRPAEVELLIGDPTRAREILGWQPQTTLEQLCALMVEADVRRNQAGTSF 344 VMRINPKFYRPAEVELLIG+P +A+ LGW+P+TTLEQLC +MVEAD+RRNQAG SF Sbjct: 301 VMRINPKFYRPAEVELLIGNPAKAKAKLGWEPKTTLEQLCQMMVEADLRRNQAGFSF 357 >ref|YP_002942676.1| GDP-mannose 4,6-dehydratase [Variovorax paradoxus S110] gb|ACS17410.1| GDP-mannose 4,6-dehydratase [Variovorax paradoxus S110] Length = 346 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 281/343 (81%), Positives = 311/343 (90%) Query: 2 KTAIITGISGQDGAYLAQLLLEKNYVVYGTYRRTSSVNFWRINELGIQDHPNLHLVEFDL 61 K A++TGI+GQDGAYLA+LLL K YVV+GTYRRTSSVNFWRI ELGIQ HP+LHLVE+DL Sbjct: 4 KCAVVTGITGQDGAYLAELLLSKGYVVHGTYRRTSSVNFWRIEELGIQAHPDLHLVEYDL 63 Query: 62 TDLGTTLSLVQKVQPDEIYNLAAQSFVGVSFEQPTTTAHITGLGALNILEAIRLVNPRIR 121 TDLG++++L++ PDE+YNLAAQSFVGVSF QP TA ITG+GAL++LEAIRLVNP+IR Sbjct: 64 TDLGSSITLIKDANPDEVYNLAAQSFVGVSFNQPAATAQITGIGALHLLEAIRLVNPKIR 123 Query: 122 FYQASTSEMFGKVQEIPQRESTPFYPRSPYGVAKLYAHWMTINYRESYNIFGTSGILFNH 181 FYQASTSEMFGKVQ IPQ E TPFYPRSPYGVAKLYAHWMTINYRESY+IFG SGILFNH Sbjct: 124 FYQASTSEMFGKVQAIPQIEDTPFYPRSPYGVAKLYAHWMTINYRESYDIFGCSGILFNH 183 Query: 182 ESPLRGREFVTRKITDSVAKIKLGQLDCLELGNLDAKRDWGFAKEYVEGMWRMLQVDEPD 241 ESPLRGREFVTRKITD VAKIKLG+LD LELGNLDAKRDWGFAKEYVEGMWRMLQVDEPD Sbjct: 184 ESPLRGREFVTRKITDGVAKIKLGKLDVLELGNLDAKRDWGFAKEYVEGMWRMLQVDEPD 243 Query: 242 TFVLATNRTETVRDFVQMAFKGVGINLEFRGAAEQETAVDVATGKTVMRINPKFYRPAEV 301 T+VLATNRTETVRDFV MAFKG GI +EF+GA E E+AVD TGKTVMRINPKFYRPAEV Sbjct: 244 TYVLATNRTETVRDFVSMAFKGAGITVEFKGAGETESAVDTTTGKTVMRINPKFYRPAEV 303 Query: 302 ELLIGDPTRAREILGWQPQTTLEQLCALMVEADVRRNQAGTSF 344 ELLIG+P +A+E LGW+P TTLEQLC +MVEAD+RRN G SF Sbjct: 304 ELLIGNPAKAKEKLGWEPSTTLEQLCQMMVEADIRRNGQGFSF 346 >ref|YP_365449.1| GDP-mannose 4,6-dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] emb|CAJ25449.1| GDP-mannose 4,6-dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 346 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 279/343 (81%), Positives = 316/343 (92%) Query: 2 KTAIITGISGQDGAYLAQLLLEKNYVVYGTYRRTSSVNFWRINELGIQDHPNLHLVEFDL 61 K AIITGI+GQDGAYL +LLL K Y VYGTYRRTSSVNFWR+ E+G+ HPNL LVE+DL Sbjct: 4 KIAIITGITGQDGAYLTELLLGKGYKVYGTYRRTSSVNFWRLEEVGVAKHPNLELVEYDL 63 Query: 62 TDLGTTLSLVQKVQPDEIYNLAAQSFVGVSFEQPTTTAHITGLGALNILEAIRLVNPRIR 121 TDLGTT+++VQK+QPDEIYNLAAQSFVGVSF+QPTTTA ITG+GAL++LEAIRLVNP+IR Sbjct: 64 TDLGTTIAMVQKIQPDEIYNLAAQSFVGVSFDQPTTTAQITGIGALHLLEAIRLVNPKIR 123 Query: 122 FYQASTSEMFGKVQEIPQRESTPFYPRSPYGVAKLYAHWMTINYRESYNIFGTSGILFNH 181 FYQASTSEMFGKVQ +PQ+E TPF+PRSPYGVAKLYAHW+T+NYRESY+IFG+SGILFNH Sbjct: 124 FYQASTSEMFGKVQAVPQKEDTPFWPRSPYGVAKLYAHWITVNYRESYDIFGSSGILFNH 183 Query: 182 ESPLRGREFVTRKITDSVAKIKLGQLDCLELGNLDAKRDWGFAKEYVEGMWRMLQVDEPD 241 ESPLRGREFVTRKITDSVAKIKLG LDC+ELGNLDAKRDWGFA+EYVEGMWRMLQ +EPD Sbjct: 184 ESPLRGREFVTRKITDSVAKIKLGLLDCMELGNLDAKRDWGFAREYVEGMWRMLQAEEPD 243 Query: 242 TFVLATNRTETVRDFVQMAFKGVGINLEFRGAAEQETAVDVATGKTVMRINPKFYRPAEV 301 TFVLATNRTETVRDFV MAFKG GI++EFRG +ETAVD+ATGK VMRIN KF+RPAEV Sbjct: 244 TFVLATNRTETVRDFVGMAFKGAGIDVEFRGEDAEETAVDIATGKVVMRINSKFHRPAEV 303 Query: 302 ELLIGDPTRAREILGWQPQTTLEQLCALMVEADVRRNQAGTSF 344 ELLIGDP +A ILGW+P+TTLEQLC +MVEAD++RN+ G SF Sbjct: 304 ELLIGDPEKAARILGWKPETTLEQLCQMMVEADLKRNERGFSF 346 >ref|ZP_08405574.1| GDP-mannose 4,6-dehydratase [Hylemonella gracilis ATCC 19624] gb|EGI77338.1| GDP-mannose 4,6-dehydratase [Hylemonella gracilis ATCC 19624] Length = 344 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 284/344 (82%), Positives = 310/344 (90%) Query: 1 MKTAIITGISGQDGAYLAQLLLEKNYVVYGTYRRTSSVNFWRINELGIQDHPNLHLVEFD 60 MKTAIITGI+GQDGAYLAQLLLEK Y VYGTYRRTSSVNFWRI ELGI HP LHLVE+D Sbjct: 1 MKTAIITGITGQDGAYLAQLLLEKGYTVYGTYRRTSSVNFWRIEELGIAKHPKLHLVEYD 60 Query: 61 LTDLGTTLSLVQKVQPDEIYNLAAQSFVGVSFEQPTTTAHITGLGALNILEAIRLVNPRI 120 LTDL T++ L+Q + E+YNLAAQSFVGVSFEQP TTA ITGLG LN+LEAIR VNPRI Sbjct: 61 LTDLSTSIRLLQTTEAAEVYNLAAQSFVGVSFEQPVTTAEITGLGPLNLLEAIRTVNPRI 120 Query: 121 RFYQASTSEMFGKVQEIPQRESTPFYPRSPYGVAKLYAHWMTINYRESYNIFGTSGILFN 180 RFYQASTSEMFGKVQ IPQ E+TPFYPRSPYGVAKLYAHWMT+NYRESY IFG+SGILFN Sbjct: 121 RFYQASTSEMFGKVQAIPQVENTPFYPRSPYGVAKLYAHWMTVNYRESYGIFGSSGILFN 180 Query: 181 HESPLRGREFVTRKITDSVAKIKLGQLDCLELGNLDAKRDWGFAKEYVEGMWRMLQVDEP 240 HESPLRGREFVTRKITDSVAKI+LGQLD LELGNLDAKRDWGFAKEYVEGMWRMLQ DEP Sbjct: 181 HESPLRGREFVTRKITDSVAKIRLGQLDALELGNLDAKRDWGFAKEYVEGMWRMLQADEP 240 Query: 241 DTFVLATNRTETVRDFVQMAFKGVGINLEFRGAAEQETAVDVATGKTVMRINPKFYRPAE 300 DT+VLATNRTETVRDFV MAFKG G+ +EF+G E ETA+D TGKTVMR+NPKFYRPAE Sbjct: 241 DTYVLATNRTETVRDFVHMAFKGAGVIVEFKGKDESETAIDTTTGKTVMRVNPKFYRPAE 300 Query: 301 VELLIGDPTRAREILGWQPQTTLEQLCALMVEADVRRNQAGTSF 344 V+LLIG+P +A+ LGW+PQTTLEQLC +MVEAD+RRN+AG SF Sbjct: 301 VDLLIGNPAKAKAKLGWEPQTTLEQLCQMMVEADLRRNKAGFSF 344