BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0604.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_545381.1| NAD-dependent epimerase/dehydratase [Methylobac... 259 2e-67 ref|YP_002552040.1| nad-dependent epimerase/dehydratase [Acidovo... 254 5e-66 ref|ZP_08405572.1| nad-dependent epimerase/dehydratase [Hylemone... 252 2e-65 ref|ZP_04939463.1| Nucleoside-diphosphate-sugar epimerase [Burkh... 242 3e-62 ref|YP_002942675.1| NAD-dependent epimerase/dehydratase [Variovo... 237 7e-61 >ref|YP_545381.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus KT] gb|ABE49540.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus KT] Length = 288 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 132/207 (63%), Positives = 156/207 (75%), Gaps = 4/207 (1%) Query: 1 MNLLDALARVPKRPAAVLLAARRYSSANIYGNCDVSPIGESQSPAPANHYAMSKLAMEYM 60 +NLLDALA + P +VLLA SSAN+YGN SPI E Q+PAP NHYAMSKLAME+M Sbjct: 78 LNLLDALAGLSVTPRSVLLA----SSANVYGNAAHSPITEEQAPAPVNHYAMSKLAMEHM 133 Query: 61 ARNYLDRLPIVFARPFNYTGAGQHASFVIPKLVDHFARRASVVELGNLDVEREFNDVRTV 120 AR YLDRLP+ F RPFNYTG GQ SFVIPKLV HFA +A VELGNLDVEREFNDV V Sbjct: 134 ARTYLDRLPLFFVRPFNYTGPGQAESFVIPKLVAHFACKAQTVELGNLDVEREFNDVAFV 193 Query: 121 CDAYLALLDKGAPGQCYNVCSGQPVTLRVVIALLQEITGHSLEVRVNPAFVRASEVRTLC 180 C+AYL LLDK PG+ +N+CSG PVTLR VI +L+E+T H +EV+VNP FVR +E++TLC Sbjct: 194 CEAYLRLLDKAVPGEVFNICSGAPVTLRAVIGMLRELTAHDIEVKVNPQFVRNNEIKTLC 253 Query: 181 GSPALLEQAIGPLHHPGLRATLQWMLD 207 G P+ L + IG L TL+ ML+ Sbjct: 254 GDPSKLFRTIGEGRLVPLALTLKIMLE 280 >ref|YP_002552040.1| nad-dependent epimerase/dehydratase [Acidovorax ebreus TPSY] gb|ACM32040.1| NAD-dependent epimerase/dehydratase [Acidovorax ebreus TPSY] Length = 288 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 135/212 (63%), Positives = 158/212 (74%), Gaps = 8/212 (3%) Query: 2 NLLDALARVPKRPAAVLLAARRYSSANIYGNCDVSPIGESQSPAPANHYAMSKLAMEYMA 61 NLL ALA +P RP VLLA SSAN+YGNCD SPI E+Q PAP NHYAMSKLAME+MA Sbjct: 79 NLLVALAALPNRPQKVLLA----SSANVYGNCDASPIDETQPPAPVNHYAMSKLAMEHMA 134 Query: 62 RNYLDRLPIVFARPFNYTGAGQHASFVIPKLVDHFARRASVVELGNLDVEREFNDVRTVC 121 R Y +RLP+V RPFNYTG GQ+ +FVIPKLVDHFAR+A+ + LGNL VEREFNDV+ VC Sbjct: 135 RTYANRLPLVITRPFNYTGPGQNVNFVIPKLVDHFARKAASIALGNLHVEREFNDVQMVC 194 Query: 122 DAYLALLDKGAPGQCYNVCSGQPVTLRVVIALLQEITGHSLEVRVNPAFVRASEVRTLCG 181 +AYL LL+ G PG+ YNVCSGQP TL+ VI L ITGH++ V VNPAFVRA+EV LCG Sbjct: 195 NAYLQLLEHGEPGEAYNVCSGQPYTLQHVIDTLSRITGHAMHVEVNPAFVRANEVHRLCG 254 Query: 182 SPALLEQAIGPLHH----PGLRATLQWMLDTS 209 SPA L+ + + P L TLQ ML + Sbjct: 255 SPAKLQALLVKQGYASTNPPLEDTLQRMLSAA 286 >ref|ZP_08405572.1| nad-dependent epimerase/dehydratase [Hylemonella gracilis ATCC 19624] gb|EGI77336.1| nad-dependent epimerase/dehydratase [Hylemonella gracilis ATCC 19624] Length = 238 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 130/213 (61%), Positives = 151/213 (70%), Gaps = 8/213 (3%) Query: 1 MNLLDALARVPKRPAAVLLAARRYSSANIYGNCDVSPIGESQSPAPANHYAMSKLAMEYM 60 MNLL ALA++P P VLLA SSAN+YGN + SP+ E Q PAP NHYAMSKLAMEYM Sbjct: 27 MNLLAALAKLPSPPCQVLLA----SSANVYGNAEASPLVEDQFPAPVNHYAMSKLAMEYM 82 Query: 61 ARNYLDRLPIVFARPFNYTGAGQHASFVIPKLVDHFARRASVVELGNLDVEREFNDVRTV 120 AR Y D+LPIV ARPFNYTG GQ SFVIPK+V HFA ++ +ELGNL VERE+NDVR V Sbjct: 83 ARTYADKLPIVIARPFNYTGPGQDKSFVIPKIVGHFANKSPFIELGNLHVEREYNDVRMV 142 Query: 121 CDAYLALLDKGAPGQCYNVCSGQPVTLRVVIALLQEITGHSLEVRVNPAFVRASEVRTLC 180 CDAYL LL G GQ YNVCSGQ TL+ VI L ++ H LEV+VNPAFVRA+EV LC Sbjct: 143 CDAYLQLLQHGEVGQTYNVCSGQTYTLQHVIETLSRLSAHKLEVKVNPAFVRANEVHRLC 202 Query: 181 GSPALLEQAIG----PLHHPGLRATLQWMLDTS 209 G+PA L + + L TL WML ++ Sbjct: 203 GNPAKLRKLLADRGVTQQQVSLSDTLTWMLSSN 235 >ref|ZP_04939463.1| Nucleoside-diphosphate-sugar epimerase [Burkholderia cenocepacia PC184] gb|EAY62634.1| Nucleoside-diphosphate-sugar epimerase [Burkholderia cenocepacia PC184] Length = 311 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 127/209 (60%), Positives = 150/209 (71%), Gaps = 8/209 (3%) Query: 2 NLLDALARVPKRPAAVLLAARRYSSANIYGNCDVSPIGESQSPAPANHYAMSKLAMEYMA 61 +LLDAL ++P P VL+A SSAN+YGN D SP+ E+ PAP NHYA+SKLAMEYMA Sbjct: 107 HLLDALVQLPVAPHRVLIA----SSANVYGNSDRSPLAETYVPAPVNHYAISKLAMEYMA 162 Query: 62 RNYLDRLPIVFARPFNYTGAGQHASFVIPKLVDHFARRASVVELGNLDVEREFNDVRTVC 121 R Y DRL IV RPFNYTG GQ+ +FVIPKL HFA RA+ V LGNLDVEREFNDV+ VC Sbjct: 163 RTYADRLNIVITRPFNYTGPGQNINFVIPKLAKHFAERAASVALGNLDVEREFNDVQLVC 222 Query: 122 DAYLALLDKGAPGQCYNVCSGQPVTLRVVIALLQEITGHSLEVRVNPAFVRASEVRTLCG 181 +AY+ALL G PG+ YNVCSGQP TLR +I + ITGH + + VNPAFVR +EV LCG Sbjct: 223 NAYMALLSHGEPGETYNVCSGQPYTLREIIDTFEAITGHQMTIEVNPAFVRKNEVHRLCG 282 Query: 182 SP----ALLEQAIGPLHHPGLRATLQWML 206 +P +L + L P LRATL ML Sbjct: 283 NPDKLNTILRASGVALDVPTLRATLTRML 311 >ref|YP_002942675.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus S110] gb|ACS17409.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus S110] Length = 295 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 128/209 (61%), Positives = 148/209 (70%), Gaps = 8/209 (3%) Query: 2 NLLDALARVPKRPAAVLLAARRYSSANIYGNCDVSPIGESQSPAPANHYAMSKLAMEYMA 61 NLL+AL ++P+RP VLLA SSANIYGN SPI E+Q+PAP NHY MSKLAMEYMA Sbjct: 79 NLLNALVQLPERPDRVLLA----SSANIYGNTARSPIDETQAPAPVNHYGMSKLAMEYMA 134 Query: 62 RNYLDRLPIVFARPFNYTGAGQHASFVIPKLVDHFARRASVVELGNLDVEREFNDVRTVC 121 R Y DRL +V RPFNYTG GQ A+F+IPKL HFA RA + LGNLDVEREFNDV+ VC Sbjct: 135 RTYRDRLNLVITRPFNYTGPGQDANFLIPKLAMHFAARAPSIALGNLDVEREFNDVQMVC 194 Query: 122 DAYLALLDKGAPGQCYNVCSGQPVTLRVVIALLQEITGHSLEVRVNPAFVRASEVRTLCG 181 DAYL LL G PG+ YN+CSG+P LR VI L +T HS + VNPAFVRA+EV LCG Sbjct: 195 DAYLLLLAHGEPGEAYNICSGRPYALRYVIETLARMTSHSPRIEVNPAFVRANEVHRLCG 254 Query: 182 SPA----LLEQAIGPLHHPGLRATLQWML 206 +P+ LL + L P L TL ML Sbjct: 255 NPSKLRVLLAKQGAVLAEPALEETLARML 283