BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0597.p (231 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_766413.1| hypothetical protein RL0804 [Rhizobium legumino... 347 1e-93 ref|YP_004352787.1| hypothetical protein PSEBR_a1582 [Pseudomona... 346 2e-93 ref|NP_842180.1| hypothetical protein NE2176 [Nitrosomonas europ... 341 4e-92 ref|YP_001414573.1| WbqC-like family protein [Parvibaculum lavam... 333 2e-89 emb|CAE00197.1| hypothetical protein [Rhizobium leguminosarum bv... 310 1e-82 >ref|YP_766413.1| hypothetical protein RL0804 [Rhizobium leguminosarum bv. viciae 3841] emb|CAK06298.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 230 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 165/227 (72%), Positives = 189/227 (83%) Query: 1 MKKIAILQSNYIPWRGYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGLQWLTVPVR 60 MKK+AI+QSNYIPW+GYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQG+QWLTVPV+ Sbjct: 1 MKKVAIVQSNYIPWKGYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGIQWLTVPVQ 60 Query: 61 VKGKYLQKIRETEIEGTAWAAEHWKSLQQNYRRAAHFDQVAEWLHPLYQDCQHTHLSELN 120 VKGKY QKIRETEIEGT WA+ HWKSL QNYRRAAHF+++A WL PLY + +HLS LN Sbjct: 61 VKGKYHQKIRETEIEGTEWASAHWKSLIQNYRRAAHFEEIAVWLEPLYLNEPPSHLSPLN 120 Query: 121 RGFIEAICGFLHIKTRITNSWDYELVDGKTERLVDLCLQAGATHYISGPSAKGYVEEEQF 180 R FI AIC +L I+T I++SWDY LV+GKTERL LC QAG T Y+SGP+AK YV+EE F Sbjct: 121 RRFIAAICNYLSIETVISHSWDYTLVEGKTERLAALCAQAGGTEYVSGPAAKDYVDEEVF 180 Query: 181 LRAGITLEWFDYAGFKDYPQQWGDFLPTVTILDLLFNCGSDAGQFLR 227 GI L WFDYAG+ YPQ WG+F+ VTILDLLFNCG D+ +R Sbjct: 181 KERGIRLTWFDYAGYPKYPQLWGEFVHGVTILDLLFNCGRDSRNHMR 227 >ref|YP_004352787.1| hypothetical protein PSEBR_a1582 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA67783.1| Conserved hypothetical protein WbqC-like protein family [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 231 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 165/229 (72%), Positives = 193/229 (84%) Query: 1 MKKIAILQSNYIPWRGYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGLQWLTVPVR 60 MKK+AILQSNYIPW+GYFD+IA+VDEFILYDDMQYTRRDWRNRNQIKTPQGLQWLTVPV Sbjct: 1 MKKVAILQSNYIPWKGYFDIIASVDEFILYDDMQYTRRDWRNRNQIKTPQGLQWLTVPVL 60 Query: 61 VKGKYLQKIRETEIEGTAWAAEHWKSLQQNYRRAAHFDQVAEWLHPLYQDCQHTHLSELN 120 VKGKY QKIRETEI+GT WAA HWKSL QNY RA HF ++A+WL PLY + +THLS LN Sbjct: 61 VKGKYHQKIRETEIDGTEWAAAHWKSLVQNYSRAPHFHEIAKWLEPLYLNTSYTHLSILN 120 Query: 121 RGFIEAICGFLHIKTRITNSWDYELVDGKTERLVDLCLQAGATHYISGPSAKGYVEEEQF 180 + FI+AIC +L+I TRI++SWDY+ VDGKTERL +LC+QAGAT Y+SGPSAK YV+E+ F Sbjct: 121 QRFIQAICDYLNITTRISHSWDYKQVDGKTERLAELCVQAGATEYVSGPSAKNYVDEQIF 180 Query: 181 LRAGITLEWFDYAGFKDYPQQWGDFLPTVTILDLLFNCGSDAGQFLRNI 229 I L WFDYAG+ DYPQ WG+F VTILDLLFNCG D+ + +R + Sbjct: 181 EAMNIKLTWFDYAGYPDYPQLWGEFTHGVTILDLLFNCGKDSHRQMRYV 229 >ref|NP_842180.1| hypothetical protein NE2176 [Nitrosomonas europaea ATCC 19718] emb|CAD86087.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 230 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 162/229 (70%), Positives = 188/229 (82%) Query: 1 MKKIAILQSNYIPWRGYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGLQWLTVPVR 60 MKK+AI+QSNYIPW+GYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQG+QWLTVPV Sbjct: 1 MKKVAIVQSNYIPWKGYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGVQWLTVPVL 60 Query: 61 VKGKYLQKIRETEIEGTAWAAEHWKSLQQNYRRAAHFDQVAEWLHPLYQDCQHTHLSELN 120 VKGKY QKIRETEI+GT WAA HWK+L QNYRR+ HF ++A WL PLY TH+S+LN Sbjct: 61 VKGKYHQKIRETEIDGTDWAAAHWKALVQNYRRSPHFTEIAAWLEPLYLAETFTHISQLN 120 Query: 121 RGFIEAICGFLHIKTRITNSWDYELVDGKTERLVDLCLQAGATHYISGPSAKGYVEEEQF 180 R FIEAIC +L IKT I NSWDY L+DGKTERL DLC+QAG T YISGP+AK YV+E+ F Sbjct: 121 RRFIEAICNYLGIKTVIKNSWDYTLLDGKTERLADLCVQAGGTEYISGPAAKDYVDEQVF 180 Query: 181 LRAGITLEWFDYAGFKDYPQQWGDFLPTVTILDLLFNCGSDAGQFLRNI 229 GI L WFDY G+ +Y Q WG+F VTILDLL NCG +A ++++ + Sbjct: 181 KENGIKLTWFDYIGYPEYQQLWGEFTHGVTILDLLLNCGKNAKRYMKYV 229 >ref|YP_001414573.1| WbqC-like family protein [Parvibaculum lavamentivorans DS-1] gb|ABS64916.1| WbqC-like family protein [Parvibaculum lavamentivorans DS-1] Length = 232 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 154/227 (67%), Positives = 186/227 (81%) Query: 1 MKKIAILQSNYIPWRGYFDMIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGLQWLTVPVR 60 MKK+AILQSNYIPW+GYFD+IA+VDEFILYDDMQYTRRDWRNRNQIKTPQGL WLTVPV+ Sbjct: 1 MKKVAILQSNYIPWKGYFDLIASVDEFILYDDMQYTRRDWRNRNQIKTPQGLMWLTVPVK 60 Query: 61 VKGKYLQKIRETEIEGTAWAAEHWKSLQQNYRRAAHFDQVAEWLHPLYQDCQHTHLSELN 120 VKGKY QKI ETEI+G W HWKS+ NY+RA F +V EWL P Y + +++HLS LN Sbjct: 61 VKGKYHQKICETEIDGVDWPEGHWKSISSNYKRAPFFAEVTEWLSPFYLEKRYSHLSILN 120 Query: 121 RGFIEAICGFLHIKTRITNSWDYELVDGKTERLVDLCLQAGATHYISGPSAKGYVEEEQF 180 R +EAIC +L + T ITNS DYELV G+TERL LC QAGA+ YISGP+A+ Y++EE F Sbjct: 121 RDLLEAICRYLGVCTTITNSSDYELVQGQTERLASLCEQAGASEYISGPAAREYLDEEVF 180 Query: 181 LRAGITLEWFDYAGFKDYPQQWGDFLPTVTILDLLFNCGSDAGQFLR 227 R GI + WFDY+G+ +YPQ WGDF+ TV+I+DLLFNCGS AGQ+++ Sbjct: 181 RRKGIGVTWFDYSGYPEYPQLWGDFVHTVSIVDLLFNCGSSAGQYMK 227 >emb|CAE00197.1| hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 211 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 149/208 (71%), Positives = 170/208 (81%) Query: 20 MIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGLQWLTVPVRVKGKYLQKIRETEIEGTAW 79 MIAAVDEFILYDDMQYTRRDWRNRNQIKTPQG+QWLTVPV+VKGKY QKIRETEIEGT W Sbjct: 1 MIAAVDEFILYDDMQYTRRDWRNRNQIKTPQGIQWLTVPVQVKGKYHQKIRETEIEGTEW 60 Query: 80 AAEHWKSLQQNYRRAAHFDQVAEWLHPLYQDCQHTHLSELNRGFIEAICGFLHIKTRITN 139 A+ HWKSL QNYRRAAHF+++A WL PLY + +HLS LNR FI AIC +L I+T I++ Sbjct: 61 ASAHWKSLIQNYRRAAHFEEIAVWLEPLYLNEPPSHLSPLNRRFIAAICNYLSIETVISH 120 Query: 140 SWDYELVDGKTERLVDLCLQAGATHYISGPSAKGYVEEEQFLRAGITLEWFDYAGFKDYP 199 SWDY LV+GKTERL LC QAG T Y+SGP+AK YV+EE F GI L WFDYAG+ YP Sbjct: 121 SWDYTLVEGKTERLAALCAQAGGTEYVSGPAAKDYVDEEVFKERGIRLTWFDYAGYPKYP 180 Query: 200 QQWGDFLPTVTILDLLFNCGSDAGQFLR 227 Q WG+F+ VTILDLLFNCG D+ +R Sbjct: 181 QLWGEFVHGVTILDLLFNCGRDSRNHMR 208