BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0593.p         (228 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004352782.1| hypothetical protein PSEBR_a1577 [Pseudomona...   154   9e-36
ref|YP_003303376.1| hypothetical protein Sdel_0304 [Sulfurospiri...   132   4e-29
ref|YP_410986.1| hypothetical protein Nmul_A0286 [Nitrosospira m...   121   7e-26
ref|NP_693338.1| hypothetical protein OB2417 [Oceanobacillus ihe...   119   5e-25
ref|ZP_01856303.1| hypothetical protein PM8797T_27602 [Planctomy...   116   3e-24

>ref|YP_004352782.1| hypothetical protein PSEBR_a1577 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gb|AEA67778.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 124

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 87/124 (70%), Positives = 100/124 (80%)

Query: 105 MNRLFDYLYILATIVFTVYGQLILKWRIGHFGALPLGGADKLKFLLGLLFDPLIFSGFFS 164
           M   F+Y+YILATI FTVYGQLILKWRI   G LP+   +K+KFLL LL DP IFSGF +
Sbjct: 1   MANAFNYIYILATIAFTVYGQLILKWRISKLGPLPVEPIEKIKFLLLLLLDPGIFSGFAA 60

Query: 165 AFLASLAWMAAMTKFELSHAYPFMSLNFAIVLILSVWLLNEGLTMPKLFGISLIIIGTVV 224
            FLASLAWMAAMTKF+LSHAYPFMSLNF IVL+LS W+L+E +T  K  G+ LII+GTVV
Sbjct: 61  GFLASLAWMAAMTKFDLSHAYPFMSLNFVIVLLLSGWILSEPMTFQKALGVGLIILGTVV 120

Query: 225 AARG 228
           AARG
Sbjct: 121 AARG 124


>ref|YP_003303376.1| hypothetical protein Sdel_0304 [Sulfurospirillum deleyianum DSM
           6946]
 gb|ACZ11341.1| conserved hypothetical protein [Sulfurospirillum deleyianum DSM
           6946]
          Length = 120

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 67/118 (56%), Positives = 89/118 (75%)

Query: 111 YLYILATIVFTVYGQLILKWRIGHFGALPLGGADKLKFLLGLLFDPLIFSGFFSAFLASL 170
           +LYI  TI FTVYGQL++KWRI ++G LP    +K+ FLL L  DP I SGF SAF+ASL
Sbjct: 3   HLYIFGTIFFTVYGQLVIKWRIPNYGHLPEETLEKIVFLLKLFLDPFILSGFVSAFVASL 62

Query: 171 AWMAAMTKFELSHAYPFMSLNFAIVLILSVWLLNEGLTMPKLFGISLIIIGTVVAARG 228
            WMAAMTKFELS+AYPFM L F +V I SV+L +E +T+ K+ G++LI++G  +++R 
Sbjct: 63  CWMAAMTKFELSYAYPFMGLTFVVVFISSVFLFSESVTLYKVLGLALIVLGIFISSRA 120


>ref|YP_410986.1| hypothetical protein Nmul_A0286 [Nitrosospira multiformis ATCC
           25196]
 gb|ABB73594.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 121

 Score =  121 bits (304), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query: 108 LFDYLYILATIVFTVYGQLILKWRIGHFGALPLGGADKLKFLLGLLFDPLIFSGFFSAFL 167
           +  Y YI  TIVFTVYGQ++LKW++   G  P   +DK+ FL  L+ +P + SGF +AFL
Sbjct: 1   MISYFYIFLTIVFTVYGQIVLKWQVIGAGEFPASASDKILFLARLVLNPWVISGFLAAFL 60

Query: 168 ASLAWMAAMTKFELSHAYPFMSLNFAIVLILSVWLLNEGLTMPKLFGISLIIIGTVVAAR 227
           ASL WMAAMTK ELSH YPFMSLNF  V++LS  L +E +TMPK+ G+ LII+G  V +R
Sbjct: 61  ASLTWMAAMTKLELSHGYPFMSLNFVFVIVLSNLLFHEAITMPKMLGLGLIILGIAVGSR 120

Query: 228 G 228
           G
Sbjct: 121 G 121


>ref|NP_693338.1| hypothetical protein OB2417 [Oceanobacillus iheyensis HTE831]
 dbj|BAC14373.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 118

 Score =  119 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 63/114 (55%), Positives = 84/114 (73%)

Query: 111 YLYILATIVFTVYGQLILKWRIGHFGALPLGGADKLKFLLGLLFDPLIFSGFFSAFLASL 170
           Y YI+ TIVFTVYGQLI+KW +   G LP G  DK  FL+ ++++P I SGF +AFLA+L
Sbjct: 3   YAYIIGTIVFTVYGQLIIKWTMDKQGELPAGLMDKFLFLVQMIWNPWILSGFVAAFLAAL 62

Query: 171 AWMAAMTKFELSHAYPFMSLNFAIVLILSVWLLNEGLTMPKLFGISLIIIGTVV 224
           +WMAAMTKF++S+AYPFMSL+F +V ILS     E ++  K+ G  LII+G +V
Sbjct: 63  SWMAAMTKFDISYAYPFMSLSFVLVFILSAIFFGEPISTQKIVGFGLIILGIIV 116


>ref|ZP_01856303.1| hypothetical protein PM8797T_27602 [Planctomyces maris DSM 8797]
 gb|EDL57882.1| hypothetical protein PM8797T_27602 [Planctomyces maris DSM 8797]
          Length = 120

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/118 (51%), Positives = 86/118 (72%)

Query: 111 YLYILATIVFTVYGQLILKWRIGHFGALPLGGADKLKFLLGLLFDPLIFSGFFSAFLASL 170
           +LYIL TI+FTVYGQ+I+KW++G  GA P    DK+ F++ LL +P + S F  AFLA+L
Sbjct: 3   HLYILLTILFTVYGQIIIKWQVGLAGAFPQNSIDKVHFIVKLLLNPWVLSSFACAFLAAL 62

Query: 171 AWMAAMTKFELSHAYPFMSLNFAIVLILSVWLLNEGLTMPKLFGISLIIIGTVVAARG 228
           +WMAAMTK  LS+AYPFMSL F +V+ LS     E +T+ K  G+ LI++G +V+++G
Sbjct: 63  SWMAAMTKLPLSYAYPFMSLAFVLVMFLSALFFKEPVTLAKSVGLILIVLGIIVSSQG 120