BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0591.p (417 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_842171.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Nitro... 607 e-171 ref|YP_934179.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Azoar... 596 e-168 ref|YP_606036.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pseud... 584 e-165 ref|YP_004467995.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Al... 566 e-159 ref|YP_766403.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Rhizo... 564 e-158 >ref|NP_842171.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Nitrosomonas europaea ATCC 19718] emb|CAD86078.1| DegT/DnrJ/EryC1/StrS family [Nitrosomonas europaea ATCC 19718] Length = 381 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 297/376 (78%), Positives = 328/376 (87%), Gaps = 2/376 (0%) Query: 35 MKGKN--IPFNWPHMTGKELYYIAEAHFNGKLAGDGPYTAKCHAWLQERTASHKVLLTHS 92 MK N IPFNWPHMTGKELYYIAEAHFNG LAGDGP+T +CHAWL+ERT +K LLTHS Sbjct: 1 MKNTNHRIPFNWPHMTGKELYYIAEAHFNGSLAGDGPFTKRCHAWLEERTGCNKGLLTHS 60 Query: 93 CTAALEMAALLLDIQPGDEIIMPSYTFVSTANAFVLRGGIPVFVDIREDTLNLDERLIEQ 152 CTAALEMAALLLDIQPGDE+IMPSYTFVSTANAFVLRGG+PVFVDIREDTLNLDERLIE Sbjct: 61 CTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGGVPVFVDIREDTLNLDERLIES 120 Query: 153 AITSRTRAIVPVHYAGVACEMDAILAIARQHGLHVVEDAAQGVMSTYKGRALGAIGDLGA 212 AIT RTRAI PVHYAGVACEMD I+AIA++H L VVEDAAQGVMSTYKGRALG+IGDLGA Sbjct: 121 AITPRTRAIAPVHYAGVACEMDTIMAIAQKHELKVVEDAAQGVMSTYKGRALGSIGDLGA 180 Query: 213 YSFHETKNVISGEGGALLVNQPALAQRAEIIREKGTDRSRFFRGEVDKYTWQEVGSSFLP 272 YSFHETKNVISGEGGALLVN P L+ RAEIIREKGTDRS+FFRGEVDKYTWQEVGSSFLP Sbjct: 181 YSFHETKNVISGEGGALLVNTPDLSLRAEIIREKGTDRSQFFRGEVDKYTWQEVGSSFLP 240 Query: 273 GELIAAFLWAQLEGADAITDARLAAWHRYDEQLAQAEQDGLLRRPVVPDGCVHNAHMYYV 332 GELIAAFLWAQLE AD IT+ RLA+W RY E L E +LRRP+VP+ C HNAHMYYV Sbjct: 241 GELIAAFLWAQLEEADRITNERLASWQRYHELLGPLEAKEILRRPIVPEECQHNAHMYYV 300 Query: 333 IVPQAGQRQQVLDALKQEGIGAVFHYVPLHSSPAGLRYGRVSGAMDITDLQSERLIRLPL 392 ++ RQ+VLD K+ I +VFHYVPLHSSPAGLRYGR+ G + IT QSERL+RLPL Sbjct: 301 LLASKIDRQEVLDEFKRNDIWSVFHYVPLHSSPAGLRYGRIHGNLKITTQQSERLVRLPL 360 Query: 393 WAGLTVQQQDKVIDIL 408 W GL+V+QQD+V+++L Sbjct: 361 WVGLSVEQQDRVVEVL 376 >ref|YP_934179.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Azoarcus sp. BH72] emb|CAL95292.1| aminotransferase [Azoarcus sp. BH72] Length = 380 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 287/378 (75%), Positives = 325/378 (85%) Query: 35 MKGKNIPFNWPHMTGKELYYIAEAHFNGKLAGDGPYTAKCHAWLQERTASHKVLLTHSCT 94 ++ K IPFNWP+MTGKELYYIAEAHFNG+LAGDGP+T +CH WL+ERT +K LLTHSCT Sbjct: 2 LEEKKIPFNWPYMTGKELYYIAEAHFNGRLAGDGPFTKRCHRWLEERTGCNKGLLTHSCT 61 Query: 95 AALEMAALLLDIQPGDEIIMPSYTFVSTANAFVLRGGIPVFVDIREDTLNLDERLIEQAI 154 AALEMAALLLDIQPGDEIIMPSYTFVSTANAFVLRGG+PVFVDIRED+LNLDERLIE AI Sbjct: 62 AALEMAALLLDIQPGDEIIMPSYTFVSTANAFVLRGGVPVFVDIREDSLNLDERLIESAI 121 Query: 155 TSRTRAIVPVHYAGVACEMDAILAIARQHGLHVVEDAAQGVMSTYKGRALGAIGDLGAYS 214 T RTRAI PVHYAGVACEMD I+ +AR+HGL VVEDAAQGVMSTYKGR LG+IGDLG YS Sbjct: 122 TPRTRAIAPVHYAGVACEMDTIMIMAREHGLKVVEDAAQGVMSTYKGRPLGSIGDLGVYS 181 Query: 215 FHETKNVISGEGGALLVNQPALAQRAEIIREKGTDRSRFFRGEVDKYTWQEVGSSFLPGE 274 FHETKN+ISGEGGALLVN P ++ RAEIIREKGTDRSRFFRGEVDKYTWQEVGSSFLPGE Sbjct: 182 FHETKNLISGEGGALLVNSPDMSLRAEIIREKGTDRSRFFRGEVDKYTWQEVGSSFLPGE 241 Query: 275 LIAAFLWAQLEGADAITDARLAAWHRYDEQLAQAEQDGLLRRPVVPDGCVHNAHMYYVIV 334 LIAAFLWAQLE AD IT RLA+W RY E L E G+LRRP+VP C HNAHMYYV++ Sbjct: 242 LIAAFLWAQLEEADRITKERLASWQRYHEFLEPLEAKGILRRPIVPGDCQHNAHMYYVLL 301 Query: 335 PQAGQRQQVLDALKQEGIGAVFHYVPLHSSPAGLRYGRVSGAMDITDLQSERLIRLPLWA 394 RQ+VLD+ K+ I +VFHYVPLHSSPAG RYGR G +D+T SERL+RLP+W Sbjct: 302 APEINRQEVLDSFKRNEIWSVFHYVPLHSSPAGKRYGRSHGDLDVTTRLSERLVRLPMWV 361 Query: 395 GLTVQQQDKVIDILTSTL 412 GLT +QQ++V+++L+ + Sbjct: 362 GLTNEQQERVVEVLSEAV 379 >ref|YP_606036.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pseudomonas entomophila L48] emb|CAK13219.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pseudomonas entomophila L48] Length = 381 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 285/378 (75%), Positives = 314/378 (83%) Query: 35 MKGKNIPFNWPHMTGKELYYIAEAHFNGKLAGDGPYTAKCHAWLQERTASHKVLLTHSCT 94 M IPFN PHMTGKE +YIAEA+F LAGDGP+T +CH WL+ERT K LLTHSCT Sbjct: 1 MSFDQIPFNRPHMTGKEFHYIAEANFGHMLAGDGPFTKRCHTWLEERTGCGKALLTHSCT 60 Query: 95 AALEMAALLLDIQPGDEIIMPSYTFVSTANAFVLRGGIPVFVDIREDTLNLDERLIEQAI 154 AALEM+ALLLD+QPGDE+IMPSYTFVSTANAFVLRG IPVFVDIREDTLNLDE LIE AI Sbjct: 61 AALEMSALLLDLQPGDEVIMPSYTFVSTANAFVLRGAIPVFVDIREDTLNLDETLIEAAI 120 Query: 155 TSRTRAIVPVHYAGVACEMDAILAIARQHGLHVVEDAAQGVMSTYKGRALGAIGDLGAYS 214 T RT+AI VHYAGV+CEMD I+AIAR+HGL VVEDAAQGVMSTYKGRALG+IGDLGA+S Sbjct: 121 TPRTKAIAVVHYAGVSCEMDTIMAIARKHGLRVVEDAAQGVMSTYKGRALGSIGDLGAFS 180 Query: 215 FHETKNVISGEGGALLVNQPALAQRAEIIREKGTDRSRFFRGEVDKYTWQEVGSSFLPGE 274 FHETKNVISGEGGALLVN P L RAEIIREKGTDRSRFFRG+VDKYTWQEVGSSFLPGE Sbjct: 181 FHETKNVISGEGGALLVNDPELVLRAEIIREKGTDRSRFFRGQVDKYTWQEVGSSFLPGE 240 Query: 275 LIAAFLWAQLEGADAITDARLAAWHRYDEQLAQAEQDGLLRRPVVPDGCVHNAHMYYVIV 334 LIAAFLWAQL+ A ITD RLA W RY + LA+ E GLLRRP+VP C HNAHMY+V++ Sbjct: 241 LIAAFLWAQLQEARGITDRRLALWDRYHDTLAELEAQGLLRRPIVPADCQHNAHMYHVLL 300 Query: 335 PQAGQRQQVLDALKQEGIGAVFHYVPLHSSPAGLRYGRVSGAMDITDLQSERLIRLPLWA 394 RQ V+ AL+ E I AVFHYVPLHSSPAG RYGRV G+M +TD SERL+RLPLW Sbjct: 301 APEVDRQAVIKALRAEEIYAVFHYVPLHSSPAGERYGRVHGSMQLTDSLSERLVRLPLWC 360 Query: 395 GLTVQQQDKVIDILTSTL 412 GL QQD+V+D L L Sbjct: 361 GLKPAQQDRVVDSLGRAL 378 >ref|YP_004467995.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Alteromonas sp. SN2] gb|AEF04193.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Alteromonas sp. SN2] Length = 381 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 261/376 (69%), Positives = 316/376 (84%) Query: 40 IPFNWPHMTGKELYYIAEAHFNGKLAGDGPYTAKCHAWLQERTASHKVLLTHSCTAALEM 99 IPFNWPHMTGKELY IAE+HFNG+LAGDGP+T KCH WL+ +H+ LLT+SCTA+LEM Sbjct: 3 IPFNWPHMTGKELYNIAESHFNGRLAGDGPFTKKCHDWLEVNGHTHRALLTNSCTASLEM 62 Query: 100 AALLLDIQPGDEIIMPSYTFVSTANAFVLRGGIPVFVDIREDTLNLDERLIEQAITSRTR 159 +ALLLD++ GDEIIMPSYTFVSTANAFVLRG PVFVDIR+DTLNLDE IE+AIT++TR Sbjct: 63 SALLLDVKAGDEIIMPSYTFVSTANAFVLRGATPVFVDIRQDTLNLDETKIERAITNKTR 122 Query: 160 AIVPVHYAGVACEMDAILAIARQHGLHVVEDAAQGVMSTYKGRALGAIGDLGAYSFHETK 219 AIVPVHYAGV CEMD+IL A +GL V+EDAAQG+M+TYKG+ LG++G LGA+SFHETK Sbjct: 123 AIVPVHYAGVGCEMDSILDTAGHYGLSVIEDAAQGLMATYKGKPLGSLGKLGAFSFHETK 182 Query: 220 NVISGEGGALLVNQPALAQRAEIIREKGTDRSRFFRGEVDKYTWQEVGSSFLPGELIAAF 279 N+ISGEGGAL VN ALA++AEIIREKGT+RS+FFRGEVDKYTWQEVGSS+LPGELIAAF Sbjct: 183 NIISGEGGALFVNDQALAEKAEIIREKGTNRSQFFRGEVDKYTWQEVGSSYLPGELIAAF 242 Query: 280 LWAQLEGADAITDARLAAWHRYDEQLAQAEQDGLLRRPVVPDGCVHNAHMYYVIVPQAGQ 339 LWAQLE A+ IT+ARL +W Y LA AE G L RP++P C HNAH+YYVI+P+ Sbjct: 243 LWAQLEDAEKITEARLRSWDYYHSLLADAESQGYLNRPIIPSECGHNAHLYYVILPEHID 302 Query: 340 RQQVLDALKQEGIGAVFHYVPLHSSPAGLRYGRVSGAMDITDLQSERLIRLPLWAGLTVQ 399 R ++L +K GIGAVFHYVPLHSSPAG +YGRVSG + T++ S++LIRLPLW GL+ + Sbjct: 303 RNRILFKMKTAGIGAVFHYVPLHSSPAGKKYGRVSGELRNTEVLSKQLIRLPLWVGLSKE 362 Query: 400 QQDKVIDILTSTLKAS 415 QQ+ V+ +L L+++ Sbjct: 363 QQETVVQVLLDALRSN 378 >ref|YP_766403.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK06288.1| putative lipopolysaccharide biosynthesis protein [Rhizobium leguminosarum bv. viciae 3841] Length = 371 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 280/368 (76%), Positives = 310/368 (84%) Query: 47 MTGKELYYIAEAHFNGKLAGDGPYTAKCHAWLQERTASHKVLLTHSCTAALEMAALLLDI 106 MTGKELYYIAEA F LAGDGP+T +CH WL++ + +K LLTHSCTAALEMAALLLDI Sbjct: 1 MTGKELYYIAEAKFGNMLAGDGPFTKRCHEWLEQTSGCNKSLLTHSCTAALEMAALLLDI 60 Query: 107 QPGDEIIMPSYTFVSTANAFVLRGGIPVFVDIREDTLNLDERLIEQAITSRTRAIVPVHY 166 QPGDEIIMPSYTFVSTANAFVLRGG+PVFVDIREDTLNLDE LIE AIT RTRAIVPVHY Sbjct: 61 QPGDEIIMPSYTFVSTANAFVLRGGVPVFVDIREDTLNLDESLIEAAITPRTRAIVPVHY 120 Query: 167 AGVACEMDAILAIARQHGLHVVEDAAQGVMSTYKGRALGAIGDLGAYSFHETKNVISGEG 226 AGVACEMD I+ IA+QHGL VVEDAAQGVM+ YKGR +G+IGDL AYSFHETKNVISGEG Sbjct: 121 AGVACEMDTIMRIAKQHGLKVVEDAAQGVMAAYKGRPIGSIGDLAAYSFHETKNVISGEG 180 Query: 227 GALLVNQPALAQRAEIIREKGTDRSRFFRGEVDKYTWQEVGSSFLPGELIAAFLWAQLEG 286 GALLVN PALA RAE+IREKGTDRSRFFRGEVDKYTWQEVGSSFLPGELIAAFLWAQLE Sbjct: 181 GALLVNDPALALRAEVIREKGTDRSRFFRGEVDKYTWQEVGSSFLPGELIAAFLWAQLEE 240 Query: 287 ADAITDARLAAWHRYDEQLAQAEQDGLLRRPVVPDGCVHNAHMYYVIVPQAGQRQQVLDA 346 ++ IT RLA WH Y L E +GLLRRP+VPD C HNAHMYYV++P+ RQ+VL Sbjct: 241 SERITKDRLAIWHYYHAILEPLETEGLLRRPIVPDDCQHNAHMYYVLLPEERDRQKVLGE 300 Query: 347 LKQEGIGAVFHYVPLHSSPAGLRYGRVSGAMDITDLQSERLIRLPLWAGLTVQQQDKVID 406 LK GI +VFHYVPLHSSPAG RY R+SG + +T QSERLIRLPLW GLT +QQ++V Sbjct: 301 LKSNGISSVFHYVPLHSSPAGRRYARMSGELPVTTSQSERLIRLPLWVGLTFEQQNRVAA 360 Query: 407 ILTSTLKA 414 +L L+ Sbjct: 361 VLADALEG 368