BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0586.p (490 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773912.1| acriflavin resistance lipoprotein A [Herbasp... 650 0.0 ref|YP_004751491.1| membrane fusion protein of RND family multid... 442 e-122 ref|YP_001354626.1| acriflavin resistance lipoprotein A precurso... 425 e-117 ref|YP_001100954.1| acridine efflux pump protein [Herminiimonas ... 399 e-109 emb|CCA80860.1| component of acridine efflux pump, multidrug eff... 392 e-107 >ref|YP_003773912.1| acriflavin resistance lipoprotein A [Herbaspirillum seropedicae SmR1] gb|ADJ62004.1| acriflavin resistance lipoprotein A protein [Herbaspirillum seropedicae SmR1] Length = 402 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 384/402 (95%), Positives = 394/402 (98%) Query: 89 MSSVSRFTRLTMTVAVAAALVACGQKPAAQGGQMPPAEVSVVTIAPQRVAITNELPGRVE 148 MSSVSRFTRLTMTVA+AAALVACGQKPAAQGG MPP+EVSVVTIAPQRVAITNELPGRVE Sbjct: 1 MSSVSRFTRLTMTVAIAAALVACGQKPAAQGGPMPPSEVSVVTIAPQRVAITNELPGRVE 60 Query: 149 AFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQ 208 AFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQ Sbjct: 61 AFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQ 120 Query: 209 TSLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTANLNLGYATVTSPIS 268 T+LTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTA+LNLGYATVTSPIS Sbjct: 121 TTLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPIS 180 Query: 269 GRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDN 328 GRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDN Sbjct: 181 GRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDN 240 Query: 329 KASVTLVLENGQAYDQPGKLLFSDISVDESTGSVSLRAEFPNPKRLLLPGTYVRTKIEQA 388 KASVTL LENGQAY PGKLLFSDISVDE+TGSVSLRAEFPNPKRLLLPGTYVR KIEQA Sbjct: 241 KASVTLELENGQAYPLPGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQA 300 Query: 389 VDEQALLVPQQAVVRDAGGSSVMVVNAESKVEARPVKTGGARGNNWQVIDGLKEGDRVIV 448 VDEQALLVPQQAVVRDAGGS+VMVVNAE+KVE RPVKTGGARGNNWQV+DGLKEGDRVIV Sbjct: 301 VDEQALLVPQQAVVRDAGGSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIV 360 Query: 449 EGLQKVRPGAAVKPVQWNPAGAPAQAAGQPAKQDASAQQKAN 490 EGLQKVRPGA VKPVQWNPAGAPAQA+GQPAKQ+ASAQ KAN Sbjct: 361 EGLQKVRPGATVKPVQWNPAGAPAQASGQPAKQEASAQPKAN 402 >ref|YP_004751491.1| membrane fusion protein of RND family multidrug efflux pump [Collimonas fungivorans Ter331] gb|AEK60668.1| Membrane fusion protein of RND family multidrug efflux pump [Collimonas fungivorans Ter331] Length = 468 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 252/380 (66%), Positives = 310/380 (81%), Gaps = 2/380 (0%) Query: 88 SMSSVSRFTRLTMTVAVAAALVACGQKPAAQGGQMPPAEVSVVTIAPQRVAITNELPGRV 147 S+SS+SR TR+T+ +A+ +A+ ACG+KP AQ PPA VS +TIAP+R+A+T ELPGR+ Sbjct: 61 SVSSISRLTRITLAIALLSAVAACGKKPEAQA--QPPAGVSFITIAPERLALTTELPGRL 118 Query: 148 EAFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLT 207 EA R+AQ+ AR AGIV KR F+EGS+VK GQ L++IDPA +A+ +SAQATLA+A+ANLT Sbjct: 119 EATRIAQIGARAAGIVLKRNFREGSDVKAGQTLYQIDPAPLQAAYDSAQATLAKAEANLT 178 Query: 208 QTSLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTANLNLGYATVTSPI 267 +L AQRYKPLV+VNAVSKQ+YD+ VA QKQA ADVA+ KAA QTA+LNLGYATVTSPI Sbjct: 179 TATLKAQRYKPLVDVNAVSKQDYDDTVATQKQAAADVASAKAARQTASLNLGYATVTSPI 238 Query: 268 SGRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGD 327 SGRIG+ALVTEGALVGQG+ TQLA+VQQ+DP+YVN+TQSS D+LKLQQAM +GQL+S G Sbjct: 239 SGRIGKALVTEGALVGQGEVTQLAVVQQIDPIYVNLTQSSTDILKLQQAMKSGQLESAGP 298 Query: 328 NKASVTLVLENGQAYDQPGKLLFSDISVDESTGSVSLRAEFPNPKRLLLPGTYVRTKIEQ 387 +A VTLV E+G+ Y Q GKLLFSD++VD +TGSV+LRAEFPNP R LLPG YVR K+EQ Sbjct: 299 GQAKVTLVTEDGRTYPQSGKLLFSDLTVDANTGSVTLRAEFPNPDRNLLPGMYVRAKLEQ 358 Query: 388 AVDEQALLVPQQAVVRDAGGSSVMVVNAESKVEARPVKTGGARGNNWQVIDGLKEGDRVI 447 AV+ AL VPQQAV RD GSSV V+ A++KV R V A+G+ W V +GLK GD+VI Sbjct: 359 AVNASALTVPQQAVQRDLNGSSVFVIGADNKVAVRSVTADVAQGDKWIVTEGLKAGDKVI 418 Query: 448 VEGLQKVRPGAAVKPVQWNP 467 V+GLQKV+PGA V P W P Sbjct: 419 VDGLQKVKPGAPVNPSPWKP 438 >ref|YP_001354626.1| acriflavin resistance lipoprotein A precursor [Janthinobacterium sp. Marseille] gb|ABR90228.1| acriflavin resistance lipoprotein A precursor [Janthinobacterium sp. Marseille] Length = 422 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 240/377 (63%), Positives = 297/377 (78%), Gaps = 1/377 (0%) Query: 89 MSSVSRFTRLTMTVAVAAALVACGQKPAAQGGQMPPAEVSVVTIAPQRVAITNELPGRVE 148 MSS+ R TRL+ + + A+ CG K + Q PP EVSVVT+ P + +TNELPGR+E Sbjct: 1 MSSLPRLTRLSAALFLIYAIAGCGAK-SDQAAAPPPQEVSVVTVQPGVLGVTNELPGRME 59 Query: 149 AFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQ 208 + RVA+VRARV GIV KRVF+EGS+VK G +L++IDPAQ +A+ SA A +AR +A L Sbjct: 60 SIRVAEVRARVPGIVLKRVFREGSDVKAGTLLYQIDPAQLQATYNSADAAVARGEATLAT 119 Query: 209 TSLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTANLNLGYATVTSPIS 268 A+RYKPLVE NAVSKQEYD+ AA+KQA AD+A+ KAA + A L+LGYA+VTSPIS Sbjct: 120 AEQKAKRYKPLVETNAVSKQEYDDVAAAEKQAIADLASAKAARENARLSLGYASVTSPIS 179 Query: 269 GRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDN 328 GRIGRALVTEGALVGQGD T LA+VQQ+DP+YVN+TQS+ ++LKL++AM G+LKS G Sbjct: 180 GRIGRALVTEGALVGQGDVTPLAIVQQIDPIYVNMTQSANEVLKLKRAMDEGKLKSAGKG 239 Query: 329 KASVTLVLENGQAYDQPGKLLFSDISVDESTGSVSLRAEFPNPKRLLLPGTYVRTKIEQA 388 A VTLV ++GQ Y + GKLLFSD++VDES+GSV+LRAE PNP LLLPG YVR +IEQA Sbjct: 240 AAKVTLVTDDGQEYGRAGKLLFSDLTVDESSGSVTLRAEIPNPDGLLLPGMYVRARIEQA 299 Query: 389 VDEQALLVPQQAVVRDAGGSSVMVVNAESKVEARPVKTGGARGNNWQVIDGLKEGDRVIV 448 VDE A+ VPQQAV+R GGS+VMVV A+ KV +RPV+TG + G W + DGLKEGD+VIV Sbjct: 300 VDENAITVPQQAVLRTPGGSAVMVVGADGKVASRPVQTGSSSGTAWIITDGLKEGDQVIV 359 Query: 449 EGLQKVRPGAAVKPVQW 465 EGLQKV+PGA VKPVQW Sbjct: 360 EGLQKVQPGATVKPVQW 376 >ref|YP_001100954.1| acridine efflux pump protein [Herminiimonas arsenicoxydans] emb|CAL62833.1| Acriflavine resistance protein A [Herminiimonas arsenicoxydans] Length = 407 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 231/377 (61%), Positives = 290/377 (76%), Gaps = 1/377 (0%) Query: 89 MSSVSRFTRLTMTVAVAAALVACGQKPAAQGGQMPPAEVSVVTIAPQRVAITNELPGRVE 148 MSS+ R T L + A+ CG K A PP EVSVVTI + +TNELPGR+E Sbjct: 1 MSSLPRLTSLGAAFFILFAVAGCG-KSDAPAAAPPPTEVSVVTIKSSALGVTNELPGRLE 59 Query: 149 AFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQ 208 + R+A++RARV G+V KR F+EGS+VK G LF IDPAQ+KA+ SA A +ARA+A L Q Sbjct: 60 STRIAEIRARVPGVVLKRTFREGSDVKAGATLFLIDPAQFKATYNSANAAVARAEATLLQ 119 Query: 209 TSLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTANLNLGYATVTSPIS 268 L +RYKPLV NA+SKQEYD+ A KQAEAD+AA KAA +TA L+L YATVTSPIS Sbjct: 120 AELKEKRYKPLVATNAISKQEYDDVTATLKQAEADLAASKAARETARLSLDYATVTSPIS 179 Query: 269 GRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDN 328 GRIGRALVTEGALVGQ +AT LA VQQ+DP+YVN+TQSS ++L+LQ+A+A G+LKS G Sbjct: 180 GRIGRALVTEGALVGQNEATPLATVQQIDPIYVNMTQSSTEILQLQRALADGKLKSAGKG 239 Query: 329 KASVTLVLENGQAYDQPGKLLFSDISVDESTGSVSLRAEFPNPKRLLLPGTYVRTKIEQA 388 + VTLV E+GQ Y QPGKLLFSD++VD S+G+++LRAEFPNP LLPG YVR ++EQA Sbjct: 240 QVKVTLVTEDGQEYAQPGKLLFSDLTVDASSGAITLRAEFPNPDSQLLPGMYVRARVEQA 299 Query: 389 VDEQALLVPQQAVVRDAGGSSVMVVNAESKVEARPVKTGGARGNNWQVIDGLKEGDRVIV 448 ++E A+ VPQQA+ R G++VMVV+AE+ V +RPV TG A G++W + DGLK+GD+VIV Sbjct: 300 INENAITVPQQAISRTPDGAAVMVVSAENTVVSRPVTTGAASGDSWVISDGLKDGDQVIV 359 Query: 449 EGLQKVRPGAAVKPVQW 465 EGLQK++PGA VKPVQW Sbjct: 360 EGLQKIKPGATVKPVQW 376 >emb|CCA80860.1| component of acridine efflux pump, multidrug efflux system [blood disease bacterium R229] Length = 399 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 242/394 (61%), Positives = 297/394 (75%), Gaps = 3/394 (0%) Query: 89 MSSVSRFTRLTMTVAVAAALVACGQKPAAQ--GGQMPPAEVSVVTIAPQRVAITNELPGR 146 M++ R+ +L + AL ACG K A G MPP EV VVT+ P V +T ELPGR Sbjct: 1 MTNTRRYHQLAAAAFMIVALAACGNKQAQGPGGAGMPPTEVGVVTVQPHAVGLTTELPGR 60 Query: 147 VEAFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANL 206 +EA RVAQVRARVAGIV KR ++EGS+VK G+VLF+IDPAQY+ASL+SA+A LARA+A Sbjct: 61 LEATRVAQVRARVAGIVLKRTYQEGSDVKAGEVLFRIDPAQYQASLDSAKAQLARAEATQ 120 Query: 207 TQTSLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTANLNLGYATVTSP 266 TQ L A+RYKPLV NA+SKQ+YD+AVAA KQA ADV A +AAV TA LNLGYATVTSP Sbjct: 121 TQAQLKAERYKPLVATNAISKQDYDDAVAAAKQATADVGAARAAVDTAKLNLGYATVTSP 180 Query: 267 ISGRIGRALVTEGALVGQ-GDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSV 325 ISGR G A VTEGALVGQ GDAT LA VQQ+DP+Y+ TQSS ++++LQ+A+ AG+L + Sbjct: 181 ISGRAGLAQVTEGALVGQGGDATLLATVQQIDPIYLTFTQSSTEVMRLQEALKAGKLAAA 240 Query: 326 GDNKASVTLVLENGQAYDQPGKLLFSDISVDESTGSVSLRAEFPNPKRLLLPGTYVRTKI 385 D A +TLV E+G+ Y Q GKL FSD++VD++TGS++LRA FPN +R LLPG YVR ++ Sbjct: 241 SDTAAKITLVTEDGRVYAQTGKLYFSDLTVDQTTGSITLRAIFPNAERTLLPGMYVRARL 300 Query: 386 EQAVDEQALLVPQQAVVRDAGGSSVMVVNAESKVEARPVKTGGARGNNWQVIDGLKEGDR 445 EQAVD+QA+ VPQQAV R A GS+VM+V+AE KV R V+ A G W V GL+ GD+ Sbjct: 301 EQAVDQQAITVPQQAVSRGADGSTVMIVDAEGKVAPRKVQADRAVGTEWIVASGLQAGDK 360 Query: 446 VIVEGLQKVRPGAAVKPVQWNPAGAPAQAAGQPA 479 VIV+GLQKVRPGA VKPV W GAP+Q A A Sbjct: 361 VIVDGLQKVRPGAPVKPVAWQAGGAPSQGATASA 394