BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0578.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773921.1| bacitracin resistance undecaprenol kinase 2 ... 466 e-129 ref|YP_004751500.1| Undecaprenyl-diphosphatase [Collimonas fungi... 396 e-108 ref|YP_002871997.1| putative transporter-like membrane protein [... 388 e-106 ref|ZP_07774888.1| undecaprenyl-diphosphatase [Pseudomonas fluor... 378 e-103 ref|ZP_08071046.1| Bacitracin resistance protein BacA [Methylocy... 338 6e-91 >ref|YP_003773921.1| bacitracin resistance undecaprenol kinase 2 [Herbaspirillum seropedicae SmR1] gb|ADJ62013.1| bacitracin resistance undecaprenol kinase 2 protein [Herbaspirillum seropedicae SmR1] Length = 290 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 276/290 (95%), Positives = 284/290 (97%) Query: 1 MANVCSAGLDIGFASLSYAQIGFLGIVQGITELLPISSTAHMRVVPAFLGWHDPGSAFSA 60 MANVCSAGLDIGFASLSYAQIG LGIVQGITELLPISSTAHMR+VPA LGWHDPGSAFSA Sbjct: 1 MANVCSAGLDIGFASLSYAQIGLLGIVQGITELLPISSTAHMRIVPALLGWHDPGSAFSA 60 Query: 61 AMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMFKLAVAIILATIPIGIAGLALS 120 AMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMF+LAVAIILATIPIGIAGL+LS Sbjct: 61 AMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMFRLAVAIILATIPIGIAGLSLS 120 Query: 121 HVLNACGSPLRSLTVIGWSCIVMAVLLAISEMVCRHRRSVDQMRLRDALIVGLAQVGALI 180 HVLNACGSPLRSLTVIGWSC+ MA+LLAISEMVCRHRRSVDQMRLRDALIVGLAQVGALI Sbjct: 121 HVLNACGSPLRSLTVIGWSCVGMAILLAISEMVCRHRRSVDQMRLRDALIVGLAQVGALI 180 Query: 181 PGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAWGVLL 240 PGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAWGVLL Sbjct: 181 PGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAWGVLL 240 Query: 241 FGLAVASVSAFAAIWGLMKFLERFSTWPFIVYRAALGVFLLLAVSRGWLQ 290 FGL VASVSAFAAIWGLMKFLERFSTWPFIVYRA LG FLL+AV++GWLQ Sbjct: 241 FGLLVASVSAFAAIWGLMKFLERFSTWPFIVYRAVLGAFLLVAVAQGWLQ 290 >ref|YP_004751500.1| Undecaprenyl-diphosphatase [Collimonas fungivorans Ter331] gb|AEK60677.1| Undecaprenyl-diphosphatase [Collimonas fungivorans Ter331] Length = 299 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 229/289 (79%), Positives = 257/289 (88%) Query: 1 MANVCSAGLDIGFASLSYAQIGFLGIVQGITELLPISSTAHMRVVPAFLGWHDPGSAFSA 60 +A VCSAG DIGFASL Y Q+ LG++QGI+ELLPISSTAHMR+VPA LGWHDPGSAFSA Sbjct: 10 VAGVCSAGTDIGFASLDYVQVAILGVIQGISELLPISSTAHMRIVPAILGWHDPGSAFSA 69 Query: 61 AMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMFKLAVAIILATIPIGIAGLALS 120 AMQLAALAAV+SYF RDV VT GS+ A R R+F+ P F+L +AIILATIPIGIAGLAL+ Sbjct: 70 AMQLAALAAVVSYFWRDVREVTVGSINAVRERNFSSPSFRLGMAIILATIPIGIAGLALA 129 Query: 121 HVLNACGSPLRSLTVIGWSCIVMAVLLAISEMVCRHRRSVDQMRLRDALIVGLAQVGALI 180 VLNACGSPLRSL+VIG++CI M VLLAI+E+ CRHRR+V +MRLRDALIVGLAQVGALI Sbjct: 130 PVLNACGSPLRSLSVIGYACIAMGVLLAIAELSCRHRRTVGEMRLRDALIVGLAQVGALI 189 Query: 181 PGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAWGVLL 240 PGVSRSGSTLTAALFLNF+REEAARFSFLLGLPAIALAGLKEL VL H H+PLE W +L+ Sbjct: 190 PGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELLVLFHLHMPLETWMLLI 249 Query: 241 FGLAVASVSAFAAIWGLMKFLERFSTWPFIVYRAALGVFLLLAVSRGWL 289 FGL VASVSAF AIWGLMKFLE+FSTWPFIVYR ALG+FLL+AV G+L Sbjct: 250 FGLVVASVSAFGAIWGLMKFLEKFSTWPFIVYRIALGIFLLVAVHNGFL 298 >ref|YP_002871997.1| putative transporter-like membrane protein [Pseudomonas fluorescens SBW25] emb|CAY48626.1| putative transport-related membrane protein [Pseudomonas fluorescens SBW25] Length = 290 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 230/289 (79%), Positives = 254/289 (87%) Query: 1 MANVCSAGLDIGFASLSYAQIGFLGIVQGITELLPISSTAHMRVVPAFLGWHDPGSAFSA 60 M+NVCSAGLD+GFASL Y QI LG++QGITELLP+SSTAHMRVVPA LGW DPGSAFSA Sbjct: 1 MSNVCSAGLDVGFASLDYLQIFILGVIQGITELLPVSSTAHMRVVPALLGWQDPGSAFSA 60 Query: 61 AMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMFKLAVAIILATIPIGIAGLALS 120 AMQLAALAAV+SYF RDV VT GS+ A RR D+NDP FKLAVAI+LATIPIGIAGLALS Sbjct: 61 AMQLAALAAVVSYFWRDVRQVTTGSIGAVRRGDYNDPWFKLAVAIVLATIPIGIAGLALS 120 Query: 121 HVLNACGSPLRSLTVIGWSCIVMAVLLAISEMVCRHRRSVDQMRLRDALIVGLAQVGALI 180 LNAC SPLR L VIG SC+VMAVLLA++E+ RH R V +MRLRDALIVG+AQ+GALI Sbjct: 121 STLNACNSPLRGLMVIGISCVVMAVLLAVAEVRARHTREVSEMRLRDALIVGIAQIGALI 180 Query: 181 PGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAWGVLL 240 PGVSRSGSTLTAALFLNF+REEAARFSFLLGLPAIALAGLKEL VLLHA +P+ AW LL Sbjct: 181 PGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELWVLLHADMPVHAWPHLL 240 Query: 241 FGLAVASVSAFAAIWGLMKFLERFSTWPFIVYRAALGVFLLLAVSRGWL 289 FGL VAS+SAF AIWGLMKFLERFSTWPF++YRA LGVFL++AVS G L Sbjct: 241 FGLVVASISAFFAIWGLMKFLERFSTWPFVIYRALLGVFLIVAVSTGLL 289 >ref|ZP_07774888.1| undecaprenyl-diphosphatase [Pseudomonas fluorescens WH6] gb|EFQ63836.1| undecaprenyl-diphosphatase [Pseudomonas fluorescens WH6] Length = 290 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 227/289 (78%), Positives = 248/289 (85%) Query: 1 MANVCSAGLDIGFASLSYAQIGFLGIVQGITELLPISSTAHMRVVPAFLGWHDPGSAFSA 60 M NVCSAGLD+GFASL Y QI LG++QGITELLP+SSTAHMRVVPA LGW DPGSAFSA Sbjct: 1 MTNVCSAGLDVGFASLDYLQIFILGVIQGITELLPVSSTAHMRVVPALLGWQDPGSAFSA 60 Query: 61 AMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMFKLAVAIILATIPIGIAGLALS 120 AMQLAALAAV+SYF RDV VT GS+ A RR D+ND FKLAVAI+LATIPI IAGL LS Sbjct: 61 AMQLAALAAVVSYFWRDVRQVTTGSIGAVRRGDYNDRWFKLAVAIVLATIPICIAGLVLS 120 Query: 121 HVLNACGSPLRSLTVIGWSCIVMAVLLAISEMVCRHRRSVDQMRLRDALIVGLAQVGALI 180 LNAC SPLR L VIG +C+VMAVLLA +E+ RH R V QMRLRDALIVG+AQ+GALI Sbjct: 121 STLNACNSPLRGLMVIGIACLVMAVLLAAAELRARHTREVGQMRLRDALIVGIAQIGALI 180 Query: 181 PGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAWGVLL 240 PGVSRSGSTLTAALFLNF+REEAARFSFLLGLPAIALAGLKEL VLLHA +P AW LL Sbjct: 181 PGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELWVLLHADLPPHAWPHLL 240 Query: 241 FGLAVASVSAFAAIWGLMKFLERFSTWPFIVYRAALGVFLLLAVSRGWL 289 FGL VAS+SAF AIWGLMKFLERFSTWPF++YRA LGVFL++AVS G L Sbjct: 241 FGLVVASISAFFAIWGLMKFLERFSTWPFVIYRALLGVFLIVAVSTGLL 289 >ref|ZP_08071046.1| Bacitracin resistance protein BacA [Methylocystis sp. ATCC 49242] gb|EFY01573.1| Bacitracin resistance protein BacA [Methylocystis sp. ATCC 49242] Length = 290 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 195/289 (67%), Positives = 227/289 (78%) Query: 1 MANVCSAGLDIGFASLSYAQIGFLGIVQGITELLPISSTAHMRVVPAFLGWHDPGSAFSA 60 MA C+ GLD GF L Y ++ LG+VQGITELLPISSTAHMR+VPA LGW DPGSAFSA Sbjct: 1 MATACTNGLDTGFVDLGYIKVAALGVVQGITELLPISSTAHMRIVPALLGWKDPGSAFSA 60 Query: 61 AMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMFKLAVAIILATIPIGIAGLALS 120 AMQLAALAAV+SYF D+ + GS+ A RRRDFND F+ + I AT+PIG+AG+ LS Sbjct: 61 AMQLAALAAVVSYFWSDIRTLAVGSIQAIRRRDFNDWTFRFVMWIGFATVPIGVAGILLS 120 Query: 121 HVLNACGSPLRSLTVIGWSCIVMAVLLAISEMVCRHRRSVDQMRLRDALIVGLAQVGALI 180 H LN CGSPLRSL VIG SCIVMA LLAI+E+ C H+R++D + L+DA+IVG AQVGALI Sbjct: 121 HTLNTCGSPLRSLPVIGISCIVMAALLAIAELYCNHKRTLDHVSLKDAMIVGFAQVGALI 180 Query: 181 PGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAWGVLL 240 PGVSRSGSTLTAALFL+ +REEAARFSFLLGLPAIALAGLKEL L AH+ W VL Sbjct: 181 PGVSRSGSTLTAALFLDLKREEAARFSFLLGLPAIALAGLKELWELHKAHLDFHGWSVLT 240 Query: 241 FGLAVASVSAFAAIWGLMKFLERFSTWPFIVYRAALGVFLLLAVSRGWL 289 GL VAS+SAF AIWGL++ LERFS WPF+ YR +GV LL+ G+L Sbjct: 241 LGLFVASISAFVAIWGLLRILERFSAWPFVAYRGFIGVVLLVGFYAGFL 289