BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0576.p (524 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001436367.1| hypothetical protein ESA_00230 [Cronobacter ... 420 e-115 gb|EGL71371.1| hypothetical protein CSE899_18179 [Cronobacter sa... 417 e-114 ref|YP_004114472.1| methyl-accepting chemotaxis sensory transduc... 406 e-111 ref|YP_003211997.1| methyl-accepting chemotaxis protein II [Cron... 404 e-110 ref|YP_004826977.1| methyl-accepting chemotaxis sensory transduc... 402 e-110 >ref|YP_001436367.1| hypothetical protein ESA_00230 [Cronobacter sakazakii ATCC BAA-894] gb|ABU75531.1| hypothetical protein ESA_00230 [Cronobacter sakazakii ATCC BAA-894] Length = 531 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 286/522 (54%), Positives = 378/522 (72%), Gaps = 1/522 (0%) Query: 1 MKLNDLKIGVRLGMLSVLLLAAIAFVGIRGVMAVGEVYGQGAQGMETGALIEQSVDVARS 60 MKLN L IG RLG+L+ LLL A+ F+GIRG+ + Q M T +I +S+D AR+ Sbjct: 1 MKLNHLTIGQRLGLLAALLLVAVLFIGIRGLTINADGLEQNNNIMATEKVIAESIDTARN 60 Query: 61 AQVQFKIQVQEWKNTLLRG-KDPAAFNKYRQAFIDESAATQKQLKTLETLMPRIGMDAEP 119 AQVQFKIQVQEWKNTLLRG + AAF+KY+ AF+D+S TQ L L TL+P++GM + Sbjct: 61 AQVQFKIQVQEWKNTLLRGTQGQAAFDKYKAAFVDQSDKTQALLNRLATLLPQLGMGVDE 120 Query: 120 ARKAQQAHAELLNRYLEALKLYAADDPASVARVDEQVKGVDRVPTKMIDDIVVAVLEHSR 179 R+ H EL YL A+ Y DP S VD+ V G+DR PT+MIDD+V L+ + Sbjct: 121 VRQTIAKHEELEKSYLAAIAQYNIADPTSAQHVDKLVSGIDREPTRMIDDVVAKTLKQAD 180 Query: 180 KTREALNADSLFDYQQARLLLLVSIGLSLLLGLAITWTLVRSIVRPLDEAVQIAQTVAAG 239 A +L YQQ R +LL+++ L+L+ + IT+ LVRSI RPL +AV IA+ VAAG Sbjct: 181 ALTRQTEARNLAQYQQTRTMLLITMALTLIASILITFWLVRSITRPLAQAVIIARNVAAG 240 Query: 240 DLRSEVVIRGKDETAQLLHSLKEMNDNLAGIVAEVRSGTGAITVAATEIASGNRDLSERT 299 DL++ + + G+DETA+L+ +L+EMN NL IV+ VRSGT I A+ +IA+G+R+LS R Sbjct: 241 DLQTTITVSGRDETAELMGALQEMNGNLTRIVSGVRSGTETIATASAQIATGSRELSARN 300 Query: 300 EEQAGSLEETAASMEEITSTVQKNAENTRQAHQLADEASGVARKGGDMVGAVVQTMQAIE 359 E QA +LEETAASMEE+TS V+ NAEN+R A +A +A VA +GG++V VVQTM I Sbjct: 301 EAQASALEETAASMEELTSVVKNNAENSRFASDIARDACQVAGQGGEVVERVVQTMSEIH 360 Query: 360 ESSHRIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 419 + S I IISVIDGIAFQTNILALNAAVEAARAG +GRGFAVVA+EVR+LAQRS++AA+ Sbjct: 361 QFSTEISNIISVIDGIAFQTNILALNAAVEAARAGAEGRGFAVVAAEVRALAQRSSSAAQ 420 Query: 420 EIKELIDDSVGKINAGSALVNGAGGTMEDIITAIHKVAEIMDDINVANREQSAEIDEVNK 479 +I+ LID SV +I G++LV GAG MEDI+ ++ +V+E+++ I++ANREQS ID+VN Sbjct: 421 DIRNLIDRSVSRIAEGNSLVKGAGSAMEDILKSVQRVSELVETISMANREQSTGIDQVNI 480 Query: 480 AVVQMDGVTQQNAALVEQAAAAAESLQDQAAGLARTVSVFKL 521 AV QMD TQQNAAL +++AAAA+S+Q QA L +VSVF+L Sbjct: 481 AVTQMDASTQQNAALSQESAAAAQSMQYQAEKLLDSVSVFRL 522 >gb|EGL71371.1| hypothetical protein CSE899_18179 [Cronobacter sakazakii E899] Length = 531 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 285/522 (54%), Positives = 377/522 (72%), Gaps = 1/522 (0%) Query: 1 MKLNDLKIGVRLGMLSVLLLAAIAFVGIRGVMAVGEVYGQGAQGMETGALIEQSVDVARS 60 MKLN L IG RLG+L+ LLL A+ F+GIRG+ + Q M T +I +S+D AR+ Sbjct: 1 MKLNHLTIGQRLGLLAALLLVAVLFIGIRGLTINADGLEQNNNIMATEKVIAESIDTARN 60 Query: 61 AQVQFKIQVQEWKNTLLRG-KDPAAFNKYRQAFIDESAATQKQLKTLETLMPRIGMDAEP 119 AQVQFKIQVQEWKNTLLRG + AAF+KY+ AF+D+S TQ L L TL+P++GM + Sbjct: 61 AQVQFKIQVQEWKNTLLRGTQGQAAFDKYKAAFVDQSDKTQALLNRLATLLPQLGMSVDE 120 Query: 120 ARKAQQAHAELLNRYLEALKLYAADDPASVARVDEQVKGVDRVPTKMIDDIVVAVLEHSR 179 + H L YL A+ Y DP S VD+ V G+DR PT+MIDD+V L+ + Sbjct: 121 VHQTIALHEGLEKSYLAAIAQYNIADPTSAQHVDKLVSGIDREPTRMIDDVVAKTLKQAD 180 Query: 180 KTREALNADSLFDYQQARLLLLVSIGLSLLLGLAITWTLVRSIVRPLDEAVQIAQTVAAG 239 A +L YQQ R +LL+++ L+L+ + IT+ LVRSI RPL +AV IA+ VAAG Sbjct: 181 ALTRQTEARNLAQYQQTRTMLLITMALTLIASILITFWLVRSITRPLAQAVIIARNVAAG 240 Query: 240 DLRSEVVIRGKDETAQLLHSLKEMNDNLAGIVAEVRSGTGAITVAATEIASGNRDLSERT 299 DL++ + + G+DETA+L+ +L+EMN NL IVA VR+GT I A+T+IA+G+R+LS R Sbjct: 241 DLQTAITVSGRDETAELMSALQEMNVNLTRIVAGVRNGTETIATASTQIATGSRELSARN 300 Query: 300 EEQAGSLEETAASMEEITSTVQKNAENTRQAHQLADEASGVARKGGDMVGAVVQTMQAIE 359 E QA +LEETAASMEE+TS V+ NAEN+R A +A +A VA +GG++V VVQTM I Sbjct: 301 EAQASALEETAASMEELTSVVKNNAENSRFASDIARDACQVAGQGGEVVERVVQTMSEIH 360 Query: 360 ESSHRIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 419 + S I IISVIDGIAFQTNILALNAAVEAARAG +GRGFAVVA+EVR+LAQRS++AA+ Sbjct: 361 QFSTEISNIISVIDGIAFQTNILALNAAVEAARAGAEGRGFAVVAAEVRALAQRSSSAAQ 420 Query: 420 EIKELIDDSVGKINAGSALVNGAGGTMEDIITAIHKVAEIMDDINVANREQSAEIDEVNK 479 +I+ LID SV +I G++LV GAG MEDI+ ++ +V+E+++ I++ANREQS ID+VN Sbjct: 421 DIRNLIDRSVSRIAEGNSLVKGAGSAMEDILKSVQRVSELVETISMANREQSTGIDQVNI 480 Query: 480 AVVQMDGVTQQNAALVEQAAAAAESLQDQAAGLARTVSVFKL 521 AV QMD TQQNAAL +++AAAA+S+Q QA L +VSVF+L Sbjct: 481 AVTQMDASTQQNAALSQESAAAAQSMQYQAEKLLDSVSVFRL 522 >ref|YP_004114472.1| methyl-accepting chemotaxis sensory transducer [Pantoea sp. At-9b] gb|ADU67916.1| methyl-accepting chemotaxis sensory transducer [Pantoea sp. At-9b] Length = 526 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 266/524 (50%), Positives = 360/524 (68%), Gaps = 1/524 (0%) Query: 1 MKLNDLKIGVRLGMLSVLLLAAIAFVGIRGVMAVGEVYGQGAQGMETGALIEQSVDVARS 60 MKLN KIG RLG L+ LLL A +G+RG+ + M LI +S+D ARS Sbjct: 1 MKLNHFKIGQRLGFLATLLLLATLLMGLRGLQVNLLALNNNQEVMAQEVLIAESIDTARS 60 Query: 61 AQVQFKIQVQEWKNTLLRG-KDPAAFNKYRQAFIDESAATQKQLKTLETLMPRIGMDAEP 119 AQVQFKIQVQEWKNTLLRG + FNKY+ AF+ ES TQ L L + +G+ P Sbjct: 61 AQVQFKIQVQEWKNTLLRGNQGQDTFNKYKAAFLQESKTTQALLTKLSQIQTSLGLPTGP 120 Query: 120 ARKAQQAHAELLNRYLEALKLYAADDPASVARVDEQVKGVDRVPTKMIDDIVVAVLEHSR 179 +A+ HA L ++YL AL Y D S ARVD V G+DR PT+ IDD+V L+ ++ Sbjct: 121 VEQARSVHAGLESKYLAALDNYVISDITSAARVDHLVTGIDRAPTQQIDDLVATTLQRAQ 180 Query: 180 KTREALNADSLFDYQQARLLLLVSIGLSLLLGLAITWTLVRSIVRPLDEAVQIAQTVAAG 239 + +A+ A +L YQQ R LLL+++G LL+G +TW L++SI RPL +A+ +A+TVAAG Sbjct: 181 QMHQAIAATNLAHYQQTRSLLLLAMGCILLVGFFVTWWLIQSITRPLRQAITVAKTVAAG 240 Query: 240 DLRSEVVIRGKDETAQLLHSLKEMNDNLAGIVAEVRSGTGAITVAATEIASGNRDLSERT 299 DLR+++ + G+DETAQL+ +L++MN NL IV VRSGT AI ++A G+R+LS R Sbjct: 241 DLRTQIQVAGRDETAQLMVALRDMNANLTRIVTGVRSGTEAIADTTEQVAHGSRELSARN 300 Query: 300 EEQAGSLEETAASMEEITSTVQKNAENTRQAHQLADEASGVARKGGDMVGAVVQTMQAIE 359 E QA +LE+TAASME++TS V+ NA+N R A+ +A + A +GG +V VV M+ I Sbjct: 301 EAQASALEQTAASMEQLTSVVKNNADNARHANDIAQDTRKRAGEGGAVVEKVVVAMEEIH 360 Query: 360 ESSHRIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 419 + S I EI++VIDGIAFQTNILALNAAVEAARAG GRGFAVVA+EVR+LAQRSA+AAR Sbjct: 361 QFSREINEIVTVIDGIAFQTNILALNAAVEAARAGNDGRGFAVVAAEVRALAQRSASAAR 420 Query: 420 EIKELIDDSVGKINAGSALVNGAGGTMEDIITAIHKVAEIMDDINVANREQSAEIDEVNK 479 +I+ L + SVG I G++LV GAG +M++I+ ++ ++ +M++I+ A+ EQS I++VN Sbjct: 421 DIRGLTNRSVGLIAHGNSLVKGAGASMQEIVESVQQLCALMENISAASAEQSVGIEQVNL 480 Query: 480 AVVQMDGVTQQNAALVEQAAAAAESLQDQAAGLARTVSVFKLRS 523 AV MD TQQNA L +Q+A +A SL +Q L VSVF+L S Sbjct: 481 AVTHMDAATQQNATLSQQSAQSARSLNEQVGSLVENVSVFQLES 524 >ref|YP_003211997.1| methyl-accepting chemotaxis protein II [Cronobacter turicensis z3032] emb|CBA33878.1| Methyl-accepting chemotaxis protein II [Cronobacter turicensis z3032] Length = 504 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 268/495 (54%), Positives = 359/495 (72%), Gaps = 1/495 (0%) Query: 28 IRGVMAVGEVYGQGAQGMETGALIEQSVDVARSAQVQFKIQVQEWKNTLLRG-KDPAAFN 86 +RG+ + Q M T +I +S+D AR+AQVQFKIQVQEWKNTLLRG + AAF+ Sbjct: 1 MRGLTINADGLEQNNNIMATEKVIAESIDTARNAQVQFKIQVQEWKNTLLRGTQGQAAFD 60 Query: 87 KYRQAFIDESAATQKQLKTLETLMPRIGMDAEPARKAQQAHAELLNRYLEALKLYAADDP 146 KY+ AF+D+S TQ L L TL+P++GM+ + R+ H L YL A+ Y DP Sbjct: 61 KYKAAFVDQSDKTQALLNRLTTLLPQLGMNVDEVRQTIALHEGLEKSYLAAIAQYNIADP 120 Query: 147 ASVARVDEQVKGVDRVPTKMIDDIVVAVLEHSRKTREALNADSLFDYQQARLLLLVSIGL 206 S RVD+ V G+DR PT+MID++V L+ + A +L Y+Q R +LL+++ L Sbjct: 121 TSAQRVDKLVSGIDREPTRMIDEVVAKTLKQADALTRQTEARNLSQYEQTRTMLLITMAL 180 Query: 207 SLLLGLAITWTLVRSIVRPLDEAVQIAQTVAAGDLRSEVVIRGKDETAQLLHSLKEMNDN 266 +L+ + IT+ LVRSI RPL +AV IA+ VAAGDL++ + I G+DETA+L+ +L+EMN N Sbjct: 181 TLIASIMITFWLVRSITRPLAQAVTIARNVAAGDLQTAITISGRDETAELMSALQEMNVN 240 Query: 267 LAGIVAEVRSGTGAITVAATEIASGNRDLSERTEEQAGSLEETAASMEEITSTVQKNAEN 326 L IVA VR+GT I A+T+IA+G+R+LS R E QA +LEETAASMEE+TS V+ NAEN Sbjct: 241 LTRIVAGVRNGTETIATASTQIATGSRELSARNEAQASALEETAASMEELTSVVKNNAEN 300 Query: 327 TRQAHQLADEASGVARKGGDMVGAVVQTMQAIEESSHRIVEIISVIDGIAFQTNILALNA 386 +R A +A +A VA +GG +V VVQTM I + S I IISVIDGIAFQTNILALNA Sbjct: 301 SRFASDIARDACQVAGQGGQVVERVVQTMSEIHQFSTEISNIISVIDGIAFQTNILALNA 360 Query: 387 AVEAARAGEQGRGFAVVASEVRSLAQRSATAAREIKELIDDSVGKINAGSALVNGAGGTM 446 AVEAARAG +GRGFAVVA+EVR+LAQRS++AA++I+ LID SV +I+ G++LV GAG M Sbjct: 361 AVEAARAGAEGRGFAVVAAEVRALAQRSSSAAQDIRNLIDRSVSRIDEGNSLVKGAGSAM 420 Query: 447 EDIITAIHKVAEIMDDINVANREQSAEIDEVNKAVVQMDGVTQQNAALVEQAAAAAESLQ 506 EDI+ ++ +V+E+++ I++ANREQS ID+VN AV QMD TQQNAAL +++AAAA+S+Q Sbjct: 421 EDILKSVQRVSELVETISMANREQSTGIDQVNIAVTQMDASTQQNAALSQESAAAAQSMQ 480 Query: 507 DQAAGLARTVSVFKL 521 QA L +VSVF+L Sbjct: 481 YQAEKLLDSVSVFRL 495 >ref|YP_004826977.1| methyl-accepting chemotaxis sensory transducer [Enterobacter asburiae LF7a] gb|AEN63192.1| methyl-accepting chemotaxis sensory transducer [Enterobacter asburiae LF7a] Length = 526 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 276/523 (52%), Positives = 364/523 (69%), Gaps = 1/523 (0%) Query: 1 MKLNDLKIGVRLGMLSVLLLAAIAFVGIRGVMAVGEVYGQGAQGMETGALIEQSVDVARS 60 MKLN L IG RLG+L+ LLL A F+G+RG++ + Q Q M I S+D AR+ Sbjct: 1 MKLNTLTIGQRLGLLASLLLLATLFIGLRGLVINSDSRAQNEQIMAMEQTITDSIDTARN 60 Query: 61 AQVQFKIQVQEWKNTLLRG-KDPAAFNKYRQAFIDESAATQKQLKTLETLMPRIGMDAEP 119 AQVQFKIQVQEWKNTL+RG + AFNKY+ AFI ES TQ L L L+P+IGMD + Sbjct: 61 AQVQFKIQVQEWKNTLIRGAQGQEAFNKYKSAFIAESQNTQALLTHLGELLPKIGMDNQQ 120 Query: 120 ARKAQQAHAELLNRYLEALKLYAADDPASVARVDEQVKGVDRVPTKMIDDIVVAVLEHSR 179 + ++ HA L +YL AL Y D S +VD+ V G+DR PTKMID++V L+H++ Sbjct: 121 VMETREIHAGLEQKYLAALTTYQVGDATSAQQVDKLVTGIDREPTKMIDNVVTRTLQHAQ 180 Query: 180 KTREALNADSLFDYQQARLLLLVSIGLSLLLGLAITWTLVRSIVRPLDEAVQIAQTVAAG 239 + + A + Y++ + +L++++ L+L G+ +TW LVRSI RPL +AV IA+TVAAG Sbjct: 181 ELHKQTIARNQAKYEETKWMLMLAMALTLAAGMLVTWWLVRSITRPLAQAVTIARTVAAG 240 Query: 240 DLRSEVVIRGKDETAQLLHSLKEMNDNLAGIVAEVRSGTGAITVAATEIASGNRDLSERT 299 DL+S + G+DETA+L+ +L+EMNDNL IV+ VRSGT I A+ +IASG+ +LS R Sbjct: 241 DLQSHFAVAGRDETAELMRALQEMNDNLTRIVSGVRSGTETIATASAQIASGSHELSSRN 300 Query: 300 EEQAGSLEETAASMEEITSTVQKNAENTRQAHQLADEASGVARKGGDMVGAVVQTMQAIE 359 E QA +LE+TAASMEE+TS V+ NAEN+R A LA A VAR+G + V VQTM I Sbjct: 301 EAQASALEQTAASMEELTSVVKSNAENSRTASDLAQNARQVARQGEEAVERAVQTMSEIH 360 Query: 360 ESSHRIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 419 S I II +ID IAFQTNILALNAAVEAARAG +GRGFAVVA+EVR+LAQRSA AA+ Sbjct: 361 NFSSEINNIIGMIDSIAFQTNILALNAAVEAARAGTEGRGFAVVAAEVRALAQRSAAAAK 420 Query: 420 EIKELIDDSVGKINAGSALVNGAGGTMEDIITAIHKVAEIMDDINVANREQSAEIDEVNK 479 EI+ LID SV +I+ G+ V AG M DI+ ++ KV+E+++ I+ A+ EQS ID+VN Sbjct: 421 EIRVLIDRSVNRIDEGNGQVKQAGEAMADILHSVSKVSELIEAISHASHEQSTGIDQVNV 480 Query: 480 AVVQMDGVTQQNAALVEQAAAAAESLQDQAAGLARTVSVFKLR 522 AV MD TQQNA L ++++AAA+++ QA L TV VFKLR Sbjct: 481 AVTHMDAATQQNATLSQESSAAAQAMHRQAEQLLDTVQVFKLR 523