BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0574.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_158422.1| hypothetical protein ebA2473 [Aromatoleum aroma... 367 e-100 ref|YP_001100277.1| hypothetical protein HEAR2010 [Herminiimonas... 337 6e-91 ref|ZP_01365989.1| hypothetical protein PaerPA_01003120 [Pseudom... 300 1e-79 ref|YP_004353345.1| hypothetical protein PSEBR_a2086 [Pseudomona... 294 6e-78 ref|ZP_08017920.1| XRE family transcriptional regulator [Lautrop... 290 2e-76 >ref|YP_158422.1| hypothetical protein ebA2473 [Aromatoleum aromaticum EbN1] emb|CAI07521.1| hypothetical gene [Aromatoleum aromaticum EbN1] Length = 224 Score = 367 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 182/224 (81%), Positives = 201/224 (89%) Query: 1 MTVATDHPGVSTLVGTPKEVQARLGKSHADRVLVVAFDQIKPKVFQTLAENFANVAASMF 60 M+V DHPGVSTLVGTPKEVQARLGKSHADRVLVVAFD I P VFQ LAENF NVA+SMF Sbjct: 1 MSVVADHPGVSTLVGTPKEVQARLGKSHADRVLVVAFDHINPNVFQALAENFTNVASSMF 60 Query: 61 EVLLERQERESLERLAEVLVPRKPASPRLLKEAAMLVQARKAVLDSGDWLTAAEIAEVAG 120 EVLLER +RESLERLAEVLVPR P SPRLLKEAAMLV++RKAVL+SGDWLTAA+IA++AG Sbjct: 61 EVLLERHDRESLERLAEVLVPRTPPSPRLLKEAAMLVRSRKAVLESGDWLTAADIAQLAG 120 Query: 121 LSTRNPSAQPNKWKKQGQIFAIHHVGVDYFPGYGLDRDTGFRPVKALAEVIDILGAHKDA 180 LSTRNPSAQPNKWKKQG IFAI+H GVDYFPGYGLDRD GFRPVKALA++I+ KD+ Sbjct: 121 LSTRNPSAQPNKWKKQGLIFAINHGGVDYFPGYGLDRDAGFRPVKALAKIIETFAGRKDS 180 Query: 181 WGMAYWFRSDNSLLRGKRPQDLLQSAPERVIAAALDEIKPIGHG 224 WGMAYWFRSDNS+L GKRPQDLL SAPERV+ AA+DE++ I HG Sbjct: 181 WGMAYWFRSDNSVLGGKRPQDLLASAPERVMDAAMDEVQEIAHG 224 >ref|YP_001100277.1| hypothetical protein HEAR2010 [Herminiimonas arsenicoxydans] emb|CAL62154.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 224 Score = 337 bits (865), Expect = 6e-91, Method: Composition-based stats. Identities = 169/223 (75%), Positives = 191/223 (85%) Query: 1 MTVATDHPGVSTLVGTPKEVQARLGKSHADRVLVVAFDQIKPKVFQTLAENFANVAASMF 60 M+V D GVSTLVGTPKE+QA+L +S AD VLVVAFD IKP VF LAENF NVA+SMF Sbjct: 1 MSVVADRLGVSTLVGTPKEIQAQLARSQADHVLVVAFDHIKPSVFAALAENFTNVASSMF 60 Query: 61 EVLLERQERESLERLAEVLVPRKPASPRLLKEAAMLVQARKAVLDSGDWLTAAEIAEVAG 120 EVLLERQ+RESLERLAE+LVPR P SPRLLKEA++LVQARKAVL+SGDWLTAA IA++A Sbjct: 61 EVLLERQDRESLERLAEMLVPRNPLSPRLLKEASLLVQARKAVLESGDWLTAANIAQLAE 120 Query: 121 LSTRNPSAQPNKWKKQGQIFAIHHVGVDYFPGYGLDRDTGFRPVKALAEVIDILGAHKDA 180 LSTRNPSAQPNKWKKQ QIFAI+H G+DYFP YGLDRD GFRP+K+LA+VI+ HKD Sbjct: 121 LSTRNPSAQPNKWKKQRQIFAINHGGIDYFPDYGLDRDAGFRPLKSLAKVIETFEGHKDG 180 Query: 181 WGMAYWFRSDNSLLRGKRPQDLLQSAPERVIAAALDEIKPIGH 223 WGMAYWFRS+NS L G RPQDLL SAP+RVIAAA+DEI + H Sbjct: 181 WGMAYWFRSENSFLGGNRPQDLLASAPDRVIAAAVDEILEMTH 223 >ref|ZP_01365989.1| hypothetical protein PaerPA_01003120 [Pseudomonas aeruginosa PACS2] Length = 193 Score = 300 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 148/192 (77%), Positives = 167/192 (86%) Query: 32 VLVVAFDQIKPKVFQTLAENFANVAASMFEVLLERQERESLERLAEVLVPRKPASPRLLK 91 +LVVAFD IKP VF LAENF NVA+SMFEVLLERQ+RESLERLAE+LVPR P SPRLLK Sbjct: 1 MLVVAFDHIKPSVFAALAENFTNVASSMFEVLLERQDRESLERLAEMLVPRNPLSPRLLK 60 Query: 92 EAAMLVQARKAVLDSGDWLTAAEIAEVAGLSTRNPSAQPNKWKKQGQIFAIHHVGVDYFP 151 EA++LVQARKAVL+SGDWLTAA IA++A LSTRNPSAQPNKWKKQ QIFAI+H G+DYFP Sbjct: 61 EASLLVQARKAVLESGDWLTAANIAQLAELSTRNPSAQPNKWKKQRQIFAINHGGIDYFP 120 Query: 152 GYGLDRDTGFRPVKALAEVIDILGAHKDAWGMAYWFRSDNSLLRGKRPQDLLQSAPERVI 211 YGLDRD GFRP+K+LA+VI+ HKD WGMAYWFRS+NS L G RPQDLL SAP+RVI Sbjct: 121 DYGLDRDAGFRPLKSLAKVIETFEGHKDGWGMAYWFRSENSFLGGNRPQDLLASAPDRVI 180 Query: 212 AAALDEIKPIGH 223 AAA+DEI + H Sbjct: 181 AAAVDEILEMTH 192 >ref|YP_004353345.1| hypothetical protein PSEBR_a2086 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA68341.1| Hypothetical protein PSEBR_a2086 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 193 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 149/193 (77%), Positives = 166/193 (86%) Query: 32 VLVVAFDQIKPKVFQTLAENFANVAASMFEVLLERQERESLERLAEVLVPRKPASPRLLK 91 +LVV+FDQ+ VF+ LAENFANVA+SM+EVL ERQ+ +SLERLAEV V RKP SPRLLK Sbjct: 1 MLVVSFDQVNLNVFEALAENFANVASSMYEVLQERQDPKSLERLAEVFVTRKPPSPRLLK 60 Query: 92 EAAMLVQARKAVLDSGDWLTAAEIAEVAGLSTRNPSAQPNKWKKQGQIFAIHHVGVDYFP 151 EAAMLVQARKAVL+SGDWLTAA+IA+VA LSTRNPSAQPNKWKKQGQIFAI H GVDYFP Sbjct: 61 EAAMLVQARKAVLESGDWLTAADIAQVAQLSTRNPSAQPNKWKKQGQIFAISHGGVDYFP 120 Query: 152 GYGLDRDTGFRPVKALAEVIDILGAHKDAWGMAYWFRSDNSLLRGKRPQDLLQSAPERVI 211 GYGLD D +RP KALA+VI+ HKD WGMAYWFRSDNS L G+RPQDLL SAP+RVI Sbjct: 121 GYGLDPDACYRPFKALAKVIEAFAGHKDGWGMAYWFRSDNSFLGGQRPQDLLASAPDRVI 180 Query: 212 AAALDEIKPIGHG 224 AAA DEI+ I HG Sbjct: 181 AAAQDEIQGIVHG 193 >ref|ZP_08017920.1| XRE family transcriptional regulator [Lautropia mirabilis ATCC 51599] gb|EFV95278.1| XRE family transcriptional regulator [Lautropia mirabilis ATCC 51599] Length = 224 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 144/224 (64%), Positives = 177/224 (79%) Query: 1 MTVATDHPGVSTLVGTPKEVQARLGKSHADRVLVVAFDQIKPKVFQTLAENFANVAASMF 60 M + + PG + GTP+EV+ +LGKS A +VL V+F Q+ P+ FQ+LAEN +VA+S+ Sbjct: 1 MNMVAERPGFYAVAGTPQEVRDQLGKSDAQQVLAVSFRQLDPQAFQSLAENMGHVASSLL 60 Query: 61 EVLLERQERESLERLAEVLVPRKPASPRLLKEAAMLVQARKAVLDSGDWLTAAEIAEVAG 120 E L +RQ++ S++RLAE LVP PASPRLL+EAAMLV ARKAVL SGDWL+A E+A +AG Sbjct: 61 EALSQRQDQASMQRLAEALVPPAPASPRLLREAAMLVAARKAVLASGDWLSATELASLAG 120 Query: 121 LSTRNPSAQPNKWKKQGQIFAIHHVGVDYFPGYGLDRDTGFRPVKALAEVIDILGAHKDA 180 S RNPSAQPNKWK+QGQIFAIHH G+DYFPG+GLD D GFRP+KALA+VI IL HKD Sbjct: 121 FSPRNPSAQPNKWKRQGQIFAIHHKGIDYFPGFGLDPDRGFRPLKALADVIGILAGHKDG 180 Query: 181 WGMAYWFRSDNSLLRGKRPQDLLQSAPERVIAAALDEIKPIGHG 224 WGMAYWF+S N L GKRPQDLL + P+RVIAAA DE+ + HG Sbjct: 181 WGMAYWFQSVNGFLGGKRPQDLLATDPDRVIAAARDEVLGVLHG 224