BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0571.p (467 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_999374.1| hypothetical protein Veis_4659 [Verminephrobact... 571 e-161 ref|YP_003052402.1| hypothetical protein Msip34_2638 [Methylovor... 550 e-154 ref|YP_001340636.1| hypothetical protein Mmwyl1_1775 [Marinomona... 184 4e-44 ref|ZP_02901650.1| hypothetical protein ESCAB7627_1375 [Escheric... 173 5e-41 ref|ZP_08743747.1| hypothetical protein VII00023_14966 [Vibrio i... 164 4e-38 >ref|YP_999374.1| hypothetical protein Veis_4659 [Verminephrobacter eiseniae EF01-2] gb|ABM60356.1| hypothetical protein Veis_4659 [Verminephrobacter eiseniae EF01-2] Length = 468 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 274/468 (58%), Positives = 351/468 (75%), Gaps = 3/468 (0%) Query: 1 MGHAARLFNGSAEQTLYGRITPTEAQRDFLQAQWNSLAEHLKEELADWGYPVSTWLQGSY 60 MG A++LFNG+ +QTL GR+TPT QR+FLQ QWN LA+HLK+ LA GY +STWLQGSY Sbjct: 1 MGQASKLFNGNTDQTLIGRVTPTTEQREFLQQQWNDLADHLKQALAKHGYTISTWLQGSY 60 Query: 61 KYGTLIKPVHKGEEYDVDVGIYFHWEKKLGEITPSPDQLREWVQQELMEYQKINADIQKI 120 KY TLIKPVH GEEYDVDVG+YF W + P+P QLR+WVQ EL+EY+K +++K+ Sbjct: 61 KYATLIKPVHLGEEYDVDVGLYFEWNDD-QDAEPTPKQLRDWVQAELLEYEKACEELKKV 119 Query: 121 DLP-KERCSRAIYAQQFHIDTPTYHLDPAEDHRELACLSGKWEASDPKAIYKWFKNAVGS 179 ++P KERCSRA Y QQFHIDTP YHL+ D R LACLSGKWE SDPK +YKWFK AV Sbjct: 120 EVPPKERCSRASYIQQFHIDTPVYHLNTDSDVRRLACLSGKWEHSDPKKLYKWFKEAVSG 179 Query: 180 DNRDQLRRLVRYLKGWAAIAFQDAPASRPSSIFLTVLAADVFRDMWGARLFGIADDDALS 239 D+RDQLRRLVRYLK WAA++F DAP SRPSSIFLTV+A + ++D+W RL G+ADDDAL Sbjct: 180 DDRDQLRRLVRYLKAWAAVSFDDAPGSRPSSIFLTVIATEAYQDLWAQRLLGLADDDALL 239 Query: 240 AIIKAIFERLIKDPRVPNPVDRKEDLNRIPEGAWDAFLTRLTVLHDTALSADEAEDEASA 299 A+IK + +RL D +V NPVD+ EDLNR+ AWD FL RL L D A A +A+DEASA Sbjct: 240 AVIKKMHDRLFDDRKVENPVDKNEDLNRMTAEAWDGFLPRLAALQDIAERAGDAKDEASA 299 Query: 300 ALIWAESFSFLMPLPETDAVEVIEPTSERQLMQLPEIQIQI-FDSQDNLLATHMNEVPSV 358 ALIW+E+FSFLMPLPETD VE+++ S R +MQLPEI++++ + +AT+ NEVP V Sbjct: 300 ALIWSEAFSFLMPLPETDQVEIVDEGSGRAVMQLPEIEVKVCTGTPPRPVATYRNEVPGV 359 Query: 359 VKGQKLLFTIVNPEVVPAYASIEWTVRNSGNESDRIGDLGHARGGIRMFSIEEYSGYIGK 418 K L F IVNP VVP +A++EWTVRN G E+D+ DLGH R G+R+ S+EE++ Y+G+ Sbjct: 360 AKDCMLSFAIVNPHVVPEFATVEWTVRNEGQEADQRSDLGHRRVGMRLLSVEEHTAYVGR 419 Query: 419 HYMDCVIKNNGSIFSARRIAVYIEENLSIRRKNSQRNWMKLRTQRGRR 466 H+MDCV++ NG +++ RR+ V I + + R + + KLR+ RR Sbjct: 420 HFMDCVVRLNGQVYAVRRVPVTIRDVQHVARNPPRPPYTKLRSLFRRR 467 >ref|YP_003052402.1| hypothetical protein Msip34_2638 [Methylovorus glucosetrophus SIP3-4] gb|ACT51875.1| conserved hypothetical protein [Methylovorus glucosetrophus SIP3-4] Length = 468 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 280/469 (59%), Positives = 349/469 (74%), Gaps = 5/469 (1%) Query: 1 MGHAARLFNGSAEQTLYGRITPTEAQRDFLQAQWNSLAEHLKEELADWGYPVSTWLQGSY 60 MG A RLFNG A+QTL R+TPT QR+FLQ QWNSLA+H+K+ L GY +STWLQGSY Sbjct: 1 MGKATRLFNGGADQTLISRVTPTTEQREFLQEQWNSLADHVKKTLGKHGYTISTWLQGSY 60 Query: 61 KYGTLIKPVHKGEEYDVDVGIYFHWEKKLGEITPSPDQLREWVQQELMEYQKINADIQKI 120 KY TLIKPVH EEYDVDVGIYF W ++ +I P+P QLREWVQ+EL+EY K+ DI+KI Sbjct: 61 KYATLIKPVHSDEEYDVDVGIYFEWGEE-QDIEPAPRQLREWVQKELIEYAKLCTDIKKI 119 Query: 121 DLP-KERCSRAIYAQQFHIDTPTYHLDPAEDHRELACLSGKWEASDPKAIYKWFKNAVGS 179 + P KERCSRA YA+QFHIDTP YH + D R LAC+S KWE SDPK +YKWFK+AV Sbjct: 120 ETPAKERCSRASYARQFHIDTPVYHFNKDSDSRRLACMSDKWELSDPKRLYKWFKDAVNG 179 Query: 180 DNRDQLRRLVRYLKGWAAIAFQDAPASRPSSIFLTVLAADVFRDMWGARLFGIADDDALS 239 D+RDQLRRLVRYLK WAA++F D P SRPSSIFLTV+ + ++ +WG RLFGI DDDAL Sbjct: 180 DDRDQLRRLVRYLKTWAAVSFDDVPDSRPSSIFLTVITTEAYKSLWGQRLFGIEDDDALI 239 Query: 240 AIIKAIFERLIKDPRVPNPVDRKEDLNRIPEGAWDAFLTRLTVLHDTALSADEAEDEASA 299 AI+K + RL D +V NP+D+ E+LNR+ AWD FL RL L + A A+ AEDEASA Sbjct: 240 AIVKILHTRLFNDRQVINPIDKDENLNRMSSEAWDGFLPRLASLSNIAERAEAAEDEASA 299 Query: 300 ALIWAESFSFLMPLPETDAVEVIEPTSERQLMQLPEIQIQIF-DSQDNLLATHMNEVPSV 358 ALIW+E+FSFLMPLPETD VE++E S R +M LPEI+IQ+F + L+ TH NEVPSV Sbjct: 300 ALIWSEAFSFLMPLPETDQVEIVEEISGRAVMPLPEIEIQVFAGNPSRLVMTHRNEVPSV 359 Query: 359 VKGQKLLFTIVNPEVVPAYASIEWTVRNSGNESDRIGDLGHARGGIRMFSIEEYSGYIGK 418 KG L F IVNP VVP +A++EWTVRN G E+D+ DLGH R G+R+ EE++ Y G+ Sbjct: 360 SKGCSLSFKIVNPHVVPEFATVEWTVRNEGQEADQKSDLGHRRVGMRLLDAEEHTAYYGR 419 Query: 419 HYMDCVIKNNGSIFSARRIAVYIEENLSIRRKNSQR-NWMKLRTQRGRR 466 H+MDC+++ NG I++ RRI V + NL +N R ++ K+R+ RR Sbjct: 420 HFMDCIVRMNGQIYAVRRIPVNV-RNLDQPARNPPRPSYTKIRSFLRRR 467 >ref|YP_001340636.1| hypothetical protein Mmwyl1_1775 [Marinomonas sp. MWYL1] gb|ABR70701.1| conserved hypothetical protein [Marinomonas sp. MWYL1] Length = 453 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 134/437 (30%), Positives = 220/437 (50%), Gaps = 23/437 (5%) Query: 1 MGHAARLF-NGSAEQTLYGRITPTEAQRDFLQAQWNSLAEHLKEELA-DWGYPVSTWLQG 58 MG +A+LF + + +TL+ R++ T Q + +A+ + L E +K EL+ PV WLQG Sbjct: 1 MGLSAKLFFDNNENETLFTRVSLTPEQLEDARAKKDKLLELVKPELSLSLEVPVKHWLQG 60 Query: 59 SYKYGTLIKPVHKGEEYDVDVGIYFHWEKKLGEITPSPDQLREWVQQELMEYQKINADIQ 118 SYK TLI+P+ KG+E+D+DVG+Y + E S +++ + + ++E+ N Sbjct: 61 SYKNHTLIRPIKKGDEFDIDVGLYVLCNAE--EDGLSALDVKQ-LNRSILEWYVSNRPEA 117 Query: 119 KIDLPKERCSRAIYAQQFHIDTPTYHLDPAEDHRELACLSGKWEASDPKAIYKWFKNAVG 178 K+ K C R IY FHID P Y+ D +LA +W SDPKA+ WF V Sbjct: 118 KLGESKTSCERLIYPLSFHIDIPIYYYDAETGSCKLATQEDEWINSDPKALQDWFNKKVS 177 Query: 179 ---SDNRDQLRRLVRYLKGWAAIAFQDAPASRPSSIFLTVLAADVFRDMWGARLFGIADD 235 S + QLRR+++YLK W AI +D P SI +TVL AD++ + I Sbjct: 178 SLTSKSLAQLRRMIKYLKVWTAIKGKDDGIRIP-SIAITVLVADLYFEADDDDDAFIQ-- 234 Query: 236 DALSAIIKAIFERLIKDPRVPNPVDRKEDLNRIPEGAWDAFLTRLTVLHDTALSADEAED 295 +A+ + +I + + +P + DL + + +R L + ++++D Sbjct: 235 ---TAV--NVMNYIISNDTLDSPCN-GGDLFGFKDNEYQQIKSRSEALKSSCEFINKSDD 288 Query: 296 EASAALIWAESFSFLMPLPETDAVEVIEPTSERQLMQLPEIQIQIFDSQDNLLATHMNEV 355 ++W+ +F + P EV + T+ + P+I+++ D LL++ + + Sbjct: 289 SLQQYVLWSATFEHMFPPFIERIDEVSKKTNLPAITVPPQIKVRHLDKNKKLLSSGVKDE 348 Query: 356 PSVVKGQKLLFTIVNPEVVPAYASIEWTVRNSGNESDRIGDLGHARGGIRMFSIEEYSG- 414 V + ++L F+I N A + W VRN E+ R+ DLGH + S E Y G Sbjct: 349 IRVFRDEELYFSIDNKVDYSQTAEVHWIVRNQDEEAKRVNDLGHT--SVLSISDERYEGC 406 Query: 415 -YIGKHYMDCVI--KNN 428 Y G HYM+C++ KNN Sbjct: 407 SYSGTHYMECLVLDKNN 423 >ref|ZP_02901650.1| hypothetical protein ESCAB7627_1375 [Escherichia albertii TW07627] gb|EDS92462.1| hypothetical protein ESCAB7627_1375 [Escherichia albertii TW07627] Length = 443 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 134/442 (30%), Positives = 212/442 (47%), Gaps = 19/442 (4%) Query: 11 SAEQTLYGRITPTEAQRDFLQAQWNSLAEHLKEELAD-WGYPVSTWLQGSYKYGTLIKPV 69 + E TL+ R +E A+ N L E L++EL + + V WLQGSYK TLIKPV Sbjct: 12 NTENTLHQRTQLSEVILSKGIAKKNELIEFLRQELKEAFDCDVRFWLQGSYKSHTLIKPV 71 Query: 70 HKGEEYDVDVGIYFHWEKKLGEITPSPDQLREWVQQELMEYQKINADIQKIDLPKERCSR 129 K YD+D+G+Y ++ + E S D ++E ++ L+ Y IN + K+ K C Sbjct: 72 DKFSSYDIDIGVYLFFDAE-NEGVDSKD-VKETLRDALLSYCSINNE-AKLQESKNACEG 128 Query: 130 AIYAQQFHIDTPTYHLDPAEDHRELACLSGKWEASDPKAIYKWFKNAV-GSDNRDQLRRL 188 ++ +DTP Y+ + +LA G W SDPKAI W N +R ++RL Sbjct: 129 LKFSTFLTVDTPIYY--KTDTKIKLATDKG-WSDSDPKAIQDWITNYYKDKSDRALMKRL 185 Query: 189 VRYLKGWAAIAFQDAPASRPSSIFLTVLAADVFRDMWGARLFGIADDDALSAIIKAIFER 248 VRY K W + +Q+ + S+ + VL A + + +DD +I E Sbjct: 186 VRYFKAWVNVKWQNTGFKKIPSLAINVLVAQHMKQH-------VREDDCFIYTALSICEE 238 Query: 249 LIKDPRVPNPVDRKEDLNRIPEGAWDAFLTRLTVLHDTALSADEAEDEASAALIWAESFS 308 L V NP++ +L +P+ A +L L LS +++D A S Sbjct: 239 LESTLIVRNPLN-NSNLISMPQDAECFAHQKLDELKQVCLSCIKSDDIKRGAHF---SNL 294 Query: 309 FLMPLPETDAVEVIEPTSERQLMQLPEIQIQIFDSQDNLLATHMNEVPSVVKGQKLLFTI 368 F P+ T ++ +PEI + +D N + T + + +V KG L FTI Sbjct: 295 FQHYFPQISLDSATGSTGLPTVVNVPEISVCRYDKNGNHVETIITDRLTVNKGDSLTFTI 354 Query: 369 VNPEVVPAYASIEWTVRNSGNESDRIGDLGHARGGIRMFSIEEYSGYIGKHYMDCVIKNN 428 N Y+S +WTVRN G++++ D+GH+ G S + + Y G H M+C+I +N Sbjct: 355 RNHYDFNIYSSAQWTVRNIGSQANDANDIGHSVTGKPSESHKRGTSYTGSHTMECMILHN 414 Query: 429 GSIFSARRIAVYIEENLSIRRK 450 G+I + I V ++ ++RRK Sbjct: 415 GAIIGFKTIHVIVKPARTVRRK 436 >ref|ZP_08743747.1| hypothetical protein VII00023_14966 [Vibrio ichthyoenteri ATCC 700023] gb|EGU38793.1| hypothetical protein VII00023_14966 [Vibrio ichthyoenteri ATCC 700023] Length = 453 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 132/441 (29%), Positives = 204/441 (46%), Gaps = 29/441 (6%) Query: 32 AQWNSLAEHLKEELAD-WGYPVSTWLQGSYKYGTLIKPVHKGEEYDVDVGIYFHWEKKLG 90 A+ ++L ++L+ EL D +G V WLQGSYK TLI PV YD+D+GIY E + Sbjct: 33 AKKDALIDYLRAELEDSFGCSVKFWLQGSYKSFTLIAPVSSQSTYDIDIGIYLISELE-- 90 Query: 91 EITPSPD--QLREWVQQELMEYQKINADIQKIDLPKERCSRAIYAQQFHIDTPTYHLDPA 148 TP D ++E +++ L Y +I+ + K+ K C + IDTP Y + Sbjct: 91 --TPDVDAKDVKEVLKETLSYYCQIDTE-AKLQDSKNACEGLTFENFLTIDTPIYFIRDI 147 Query: 149 EDHRELACLSGKWEASDPKAIYKWFKNAVGSD-NRDQLRRLVRYLKGWAAIAFQDAPASR 207 +D L W SDP AI W N +D +R ++R VRYLK WA I ++ + + Sbjct: 148 KDSTPLLATDNGWIDSDPIAIQTWLTNFYSTDADRSLMKRNVRYLKAWANIRWKRSEHKK 207 Query: 208 PSSIFLTVLAADVFRDMWGARLFGIADDDALS--AIIKAIFERLIKDPRVPNPVDRKEDL 265 S+ L +L A+ I D++ S + I +L + V NP++ ++ L Sbjct: 208 IPSLALNILVANNLH---------IGDNEITSFEKTVSNICSQLNQSFEVLNPLNGQDIL 258 Query: 266 NRIPEGAWDAFLTRLTVLHDTALSADEAEDEASAALIWAESFSFLMP-LP--ETDAVEVI 322 E AF + ++ + EDEA+ AL ++ F P LP T V Sbjct: 259 GMSDEA--KAFAVKQFDHLNSVYLKVKHEDEATKALEYSNLFEHYFPQLPVLTTQQGGVS 316 Query: 323 EPTSERQLMQLPEIQIQIFDSQDNLLATHMNEVPSVVKGQKLLFTIVNPEVVPAYASIEW 382 P + +PEI ++ +DS N L+ + V KG L F I NP + W Sbjct: 317 VPV----VTNIPEIYVERYDSSGNYLSGEVTNQIDVRKGDSLTFKINNPHDFIMSDEVHW 372 Query: 383 TVRNSGNESDRIGDLGHARGGIRMFSIEEYSGYIGKHYMDCVIKNNGSIFSARRIAVYIE 442 TVRN GN+S D+GH+ + + S Y G H M+C++K+ GSI + V + Sbjct: 373 TVRNEGNQSISANDIGHSEITSINDTSQRGSAYTGTHAMECLVKSWGSITGFNLVKVRVR 432 Query: 443 ENLSIRRKNSQRNWMKLRTQR 463 I + + + K +R Sbjct: 433 PVAQIVKNKVFKGFNKFGKRR 453