BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0569.p (440 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08851128.1| hypothetical protein HMPREF9457_02837 [Dorea ... 174 3e-41 ref|ZP_06598181.1| hypothetical protein GCWU000341_00947 [Oribac... 160 3e-37 ref|ZP_06267792.1| hypothetical protein HMPREF0648_1738 [Prevote... 82 2e-13 ref|YP_378474.1| hypothetical protein Cag_0153 [Chlorobium chlor... 75 2e-11 ref|ZP_07568235.1| hypothetical protein HMPREF9505_01623 [Entero... 73 9e-11 >ref|ZP_08851128.1| hypothetical protein HMPREF9457_02837 [Dorea formicigenerans 4_6_53AFAA] gb|EGX71072.1| hypothetical protein HMPREF9457_02837 [Dorea formicigenerans 4_6_53AFAA] Length = 726 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 117/404 (28%), Positives = 204/404 (50%), Gaps = 12/404 (2%) Query: 16 LPSTAKKPADIVNYAVQLSDRDRRQISKAFSDESYEMALTFVWTKSMAALKRDLSTVGLK 75 LP P +V YA L + + ++ K + D + A W +SM L++ + ++G Sbjct: 331 LPIITDVP-QLVEYAFALPTKLQSKVKKYYLDGDFVTAANTTWIRSMGLLRKRILSLGED 389 Query: 76 FLGEILGKNGLDDDDNPTTAISHDEAIMLAEELGVVSSTEAMRLRHSHELLTHFLDSDGA 135 F+ +++ N +D N + I LA ELG ++ +L ++E +F ++D A Sbjct: 390 FVADMVEANDMDYVRN----LPAYRLIDLAHELGFINKAGKAKLLKANEFYNYF-NNDEA 444 Query: 136 NISSEEEIEREEAVQTLKTCVRNILGKNKNEVSAKFATFRAALEE-RVFKSDDLEIQNLL 194 N EE+ ++EA +K C+ IL N+ +F FR L+ RV + + + Sbjct: 445 N--EYEEMPQDEANIIIKACISYILYSNQESFGLQFNDFREKLKSGRVTELFEDDKAMFA 502 Query: 195 ISPYFFKKITLNILVNSIGERKGAKLENILANLNVILPVLWANLKENERWTVGREYANAH 254 PYF+ K ++ L+N E +G + +N++ N+ ++ P +W LK ER + Y + Sbjct: 503 TCPYFYLKTSVRSLLNLYRECEGIEYDNVVINMQIMFPAIWERLKIEERRALADAYTDYT 562 Query: 255 GDGEVTAAAGLKSALMKVKGFDYVPENLRSNVFVKAAEKLIELHEAFNNFYNEPAAIKDL 314 E + L +++V FDYV EN+RS +++ A KL ++H NNFYNEP IK+L Sbjct: 563 NASEHKKVSDLNKIMLQVHAFDYVKENVRSRTYIQIANKLRDVHFGVNNFYNEPGVIKNL 622 Query: 315 RSLGTTIPIPAFSICSSAIFCVYLGNSYGVSAAAVPIAYDMLKEFSDDRWKYYFNDCLPS 374 LGT IP A +++ V LGNSYG S +A IA +L ++ W Y + + Sbjct: 623 EDLGTQIPALAIKETITSVLYVKLGNSYGTSWSAEAIADRILDRLTESEWITYLENYMIE 682 Query: 375 DARVLNKLS-YERPRKRFVELVRKLQLNNFA--SGKMKKLLDAA 415 + ++ ++ R R ++ +++K L A + ++KKL+ A Sbjct: 683 EENLVESINGCNRMRNQWKTVIKKYHLKELAINNPQIKKLVSIA 726 >ref|ZP_06598181.1| hypothetical protein GCWU000341_00947 [Oribacterium sp. oral taxon 078 str. F0262] gb|EFE92427.1| hypothetical protein GCWU000341_00947 [Oribacterium sp. oral taxon 078 str. F0262] Length = 728 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 98/347 (28%), Positives = 176/347 (50%), Gaps = 14/347 (4%) Query: 26 IVNYAVQLSDRDRRQISKAFSDESYEMALTFVWTKSMAALKRDLSTVGLKFLGEILGKNG 85 ++ Y + L + ++ K + D + A VW +++ L+R + ++G F+ +++ Sbjct: 343 LITYGIALPKPVQAKVVKYYMDGDFATATEHVWPRAINILRRRILSLGEDFVADMVETTD 402 Query: 86 LDDDDNPTTAISHDEAIMLAEELGVVSSTEAMRLRHSHELLTHFLDSDGANISSEEEIER 145 L+ + + I L+ ELG + +L +++E F +++ + EE+ + Sbjct: 403 LE----YVRELPAYKVIELSSELGFIDKKGKRQLLNANEYYNFFQNTEADDY---EEMPK 455 Query: 146 EEAVQTLKTCVRNILGKNKNEVSAKFATFRAALE----ERVFKSDDLEIQNLLISPYFFK 201 +EA +K ++ IL N++ +F FR L+ +F+ D++ ++ PYF+ Sbjct: 456 DEANIIIKNGIKYILYNNEDSFGLQFNDFREKLKTGRISELFEDDEVMFES---CPYFYL 512 Query: 202 KITLNILVNSIGERKGAKLENILANLNVILPVLWANLKENERWTVGREYANAHGDGEVTA 261 KIT+ L+N + +G + +N+ N+N P W LK +ER + Y++ + + Sbjct: 513 KITVRSLLNLFSDTEGIEFDNVSINMNSFFPKAWGRLKFDERRALADMYSDYQSNRDSKR 572 Query: 262 AAGLKSALMKVKGFDYVPENLRSNVFVKAAEKLIELHEAFNNFYNEPAAIKDLRSLGTTI 321 L ++ V GFDYV EN R ++ A KL ++H + NNFYNEP+ IK L LGT I Sbjct: 573 VNVLSKIMVAVHGFDYVKENERLRTYIAVARKLKDIHFSMNNFYNEPSQIKLLEDLGTII 632 Query: 322 PIPAFSICSSAIFCVYLGNSYGVSAAAVPIAYDMLKEFSDDRWKYYF 368 P A C +AI + LGN YG S +A IA +L ++ W+ Y Sbjct: 633 PSLALKDCITAILFIKLGNQYGTSWSAEDIADRLLARLTETEWRTYL 679 >ref|ZP_06267792.1| hypothetical protein HMPREF0648_1738 [Prevotella bivia JCVIHMP010] gb|EFB93743.1| hypothetical protein HMPREF0648_1738 [Prevotella bivia JCVIHMP010] Length = 339 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 6/138 (4%) Query: 222 NILANLNVILPVLWANLKENERWTVGREYANAHGDGEVTAAAGLKSALMKVK---GFDYV 278 N+ N+ +I P LW + E+ + ++ ++A+ EV G AL +K G Y+ Sbjct: 158 NLKYNVKLIAPSLWNIVSEDVKSSIAVKFASLR---EVKGKDGANEALSFLKLVNGVSYI 214 Query: 279 PENLRSNVFVKAAEKLIELHEAFNNFYNEPAAIKDLRSLGTTIPIPAFSICSSAIFCVYL 338 PE+ + +F K A+ LI+ H +NNFYNEP K+L +LG IPI + + A+ YL Sbjct: 215 PESYKEVIFKKHAQFLIDAHYEWNNFYNEPNFAKELDALGYEIPIASLNTYLKAVLLSYL 274 Query: 339 GNSYGVSAAAVPIAYDML 356 GN YGVS A ML Sbjct: 275 GNCYGVSKDAQEYNEKML 292 >ref|YP_378474.1| hypothetical protein Cag_0153 [Chlorobium chlorochromatii CaD3] gb|ABB27431.1| hypothetical protein Cag_0153 [Chlorobium chlorochromatii CaD3] Length = 418 Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 93/406 (22%), Positives = 171/406 (42%), Gaps = 33/406 (8%) Query: 15 VLPSTAKKPADIVNYAVQLSDRDRRQISKA---FSDESYEMALTFVWTKSMAALKRDLST 71 VLP D+ LS+R+ I++A F Y +L +W ++ LKR + Sbjct: 3 VLPQIIANKIDVKRDFPLLSERELDYINEAKGLFDSGFYSYSLLAIWNAAVNNLKRKVEA 62 Query: 72 VGLKFLGEIL-GKNGLDDDDNPTTAISH-----DEAIML--AEELGVVSSTEAMRLRHSH 123 G++ ++ ++G D I+ D+ +++ A LG+++ L Sbjct: 63 YGVELWSSVVKDESGRKKYDKDAETIAERWSNVDDLVLITGATRLGLLNPKAGKSL---- 118 Query: 124 ELLTHFLDSDGANISSEEEIEREEAVQTLKTCVRNILGKNKNEVSAKFATFRAALEERVF 183 E++ + S+ +E E+AV + +N+ + + + ++ + Sbjct: 119 EMINWMRNHASPAHDSDNRVEMEDAVGLILLLQKNLFEQPFPDPGHSVSAIFEPIKNKTH 178 Query: 184 KSDDLEIQNLLISPYFFKKITLNILVNSIGERKGAKLENILANLNVILPVLWANLKENER 243 D+L I IS Y K + + + E N+ + PV+W E+ R Sbjct: 179 TPDELSILRDHISSY--KNQDIRNVFGFFMDLLTKGDEPAKTNVTELFPVVWEKANEDLR 236 Query: 244 WTVGREYAN--AHGDGEVTAAAGLKSA----LMKVKGFDYVPENLRSNVFVKAAEKLIEL 297 T+G +Y D + + G K+ L+K+ +Y+P+ R+ VF +AAEKL E Sbjct: 237 KTLGVKYHTFVIDPDSDDSPDKGAKTRVFELLVKLDAVNYIPDGTRARVFRRAAEKLAEA 296 Query: 298 HEAFNNFYNEPAAIKDLRSLGTTIPIPAFSICSSAIFCVYLGNSYGVSAAAVPIAYDMLK 357 + E +A ++L LG ++P AF I V+ GN +G S +Y L+ Sbjct: 297 KNTGYGWRLEESASRNLAQLGISVPSIAFEYVYQEILAVWCGNYWGRSD-----SYVTLR 351 Query: 358 EFSD----DRWKYYFNDCLPSDARVLNKLSYERPRKRFVELVRKLQ 399 F D D+ + + RV ++LS RP K V L+++ + Sbjct: 352 PFVDSLNTDQIRLVLK-MFRENERVKDELSQSRPNKIAVSLLKEFE 396 >ref|ZP_07568235.1| hypothetical protein HMPREF9505_01623 [Enterococcus faecalis TX0109] gb|EFM70152.1| hypothetical protein HMPREF9505_01623 [Enterococcus faecalis TX0109] Length = 497 Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 87/415 (20%), Positives = 188/415 (45%), Gaps = 40/415 (9%) Query: 21 KKPADIVNYAVQLSDRDRRQISK---AFSDESYEMALTFVWTKSMAALKRDLSTVGLKFL 77 K DIVN +++ S +SK A ++ ++ AL ++W ++ L+ +S +++ Sbjct: 66 KNLEDIVN-SIECSKDSMTYLSKFIHAITNGLFDAALNYLWDATINELRTRVSNYDVEYF 124 Query: 78 GEIL-----GKNGLDDDDNPTTAISHDEAIMLAEELGVVSSTEAMRLRHSHELLTHFLDS 132 ++ +N L + + I + + +E+ ++++ L H + + + Sbjct: 125 YDVTIMNQEKRNKLSGEKD-LDKIQDSDLLRGVKEIELINNITYNTLDH----IRYMRNW 179 Query: 133 DGANISSEEEIEREEAVQTLKTCVRNILGKNKNEVSAKFATFRAALEERVFKSDDLEIQN 192 +EE I + + L+TC+ N+ ++++ + + ++ R F+ ++L++++ Sbjct: 180 ASTAHPNEETITGFQIIDWLETCILNVFNLPVSDINLEIKKLLSDIKTRRFEPNELDLKS 239 Query: 193 LLISPYFFKKIT---LNILVNSI-----GERKGAKLENILANLNVILPVLWANLKENERW 244 FF+ +T ++ L+N + E G+ ++ N+N LWA E + Sbjct: 240 -----KFFESLTQKQISSLLNGVFGIYCSETSGSIAQD---NINGFASALWALNNEETKE 291 Query: 245 TVGREYANAHGDGEVTAAAGLKSALMKVKGFDYVPENLRSNVFVKAAEKLIELHEAFNNF 304 +G +Y N + +G T A + L V G +PENL+ E+L H NNF Sbjct: 292 KIGFKYGNYYINGHDTKAESARQFLEVVSGQSVIPENLKVIEISNILEELNSAHYNNNNF 351 Query: 305 YNEPAAIKDLRS-----LGTTIPIPAFSICSSAIFCVYLGNSYGVSAAAVPIAYDMLKEF 359 Y+EP+ ++LR G P ++ + C +L N YG++ A +M++ F Sbjct: 352 YSEPSLARELRKYVEGDYGKLPPSLEIDYVTTVVKC-FLTNGYGIAWNADTHYMNMIENF 410 Query: 360 SDDRWKYYFNDCLPSDARVLNKLSYERPRKRFVELVR--KLQLNNFASGKMKKLL 412 + ++ L + + KLS + +F+EL+ +++ N S ++ K + Sbjct: 411 TAEQAMIALFSYL--NEEIEKKLSTRLCQTKFLELLTIIDIKITNEKSKELIKFI 463