BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0565.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02360229.1| phage integrase family protein [Burkholderia ... 486 e-135 ref|YP_001060060.1| phage integrase [Burkholderia pseudomallei 6... 482 e-134 ref|ZP_02507223.1| phage integrase [Burkholderia pseudomallei BC... 481 e-134 gb|EGD03903.1| phage integrase family protein [Burkholderia sp. ... 481 e-133 ref|YP_620332.1| phage integrase [Burkholderia cenocepacia AU 10... 480 e-133 >ref|ZP_02360229.1| phage integrase family protein [Burkholderia oklahomensis EO147] Length = 382 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 240/377 (63%), Positives = 302/377 (80%) Query: 1 MGLIKRNNTANWYYQFQVRGKKYLGSTGTSNKTKAMQVERELRNKIHAELFLGQAETITL 60 M LI+RNN+ NWYYQFQ++GKK+ GSTGT NKTKA QVERE+RN+ HAE +LG A+ ITL Sbjct: 1 MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITL 60 Query: 61 AAALKLYLDARKNLPYHSGMMAISRKLAGYKLHAKTKEKIPCYGLPQNIQLHELQTRDIE 120 AL+ Y++AR YH M +I RK GYKLH +TK K+PCYG+ + LHEL TRD + Sbjct: 61 KDALEQYVEARSETSYHRNMCSIVRKTLGYKLHPRTKGKLPCYGMSPDTLLHELTTRDFD 120 Query: 121 RLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREIIFPTFKTTSRVRYLDEIEE 180 LV +RKAEGD PAT+KHE+GL+R+T+ EM KLG++V+REI+FP +T+ R+RYLD +E Sbjct: 121 LLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSREIVFPELRTSYRLRYLDSNDE 180 Query: 181 AALLRELNPETLRDGLKPLETRNSELQRNLQDNYDIVIALLDTGCRYSEIANIPWSAVDI 240 +ALLREL+PE LR + + E+ RN+QDNYDI + LLDTGCRYSE+ANIPWSA++I Sbjct: 181 SALLRELDPERLRTRINVSKPLTPEMTRNMQDNYDITVFLLDTGCRYSEVANIPWSAINI 240 Query: 241 EAGTIHVYRSKVSNEDRLYMTARLRDVFIRRHANKRPDGRYVFENKAGKERGYSTQAIKK 300 +A TI +YRSKV NED L+MT+RL + RR +R RYVFE++ G ERGYST++IKK Sbjct: 241 DACTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKK 300 Query: 301 AIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDPKMTQRYAH 360 AI+RAGLN P +VKE+GG+VT H LRH++ASKLVK GVSL+EVSVLLGHSDPKMTQRYAH Sbjct: 301 AIERAGLNDPVLVKERGGRVTLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAH 360 Query: 361 LAPNDASRKAVGIIDSI 377 L+PNDASRKAV +IDS+ Sbjct: 361 LSPNDASRKAVKVIDSL 377 >ref|YP_001060060.1| phage integrase [Burkholderia pseudomallei 668] gb|ABN84279.1| phage integrase [Burkholderia pseudomallei 668] Length = 381 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 237/377 (62%), Positives = 302/377 (80%) Query: 1 MGLIKRNNTANWYYQFQVRGKKYLGSTGTSNKTKAMQVERELRNKIHAELFLGQAETITL 60 M LI+RNN+ NWYYQFQ++GKK+ GSTGT NKTKA QVERE+RN+ HAE +LG A+ ITL Sbjct: 1 MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITL 60 Query: 61 AAALKLYLDARKNLPYHSGMMAISRKLAGYKLHAKTKEKIPCYGLPQNIQLHELQTRDIE 120 AL+ Y++AR + YH M +I RK GYKLH +TK K+PCYG+ + LHEL TRD + Sbjct: 61 KDALEQYVEARSDTSYHRNMCSIVRKTLGYKLHPRTKAKLPCYGMLPDTLLHELTTRDFD 120 Query: 121 RLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREIIFPTFKTTSRVRYLDEIEE 180 L +RKAEGD PAT+KHE+GL+R+T+ EM KLG++V+REI+FP +T+ R+RYLD +E Sbjct: 121 LLAAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSREIVFPELRTSYRLRYLDSNDE 180 Query: 181 AALLRELNPETLRDGLKPLETRNSELQRNLQDNYDIVIALLDTGCRYSEIANIPWSAVDI 240 +ALLREL+PE LR + + + E+ RN+QDNYDI + LLDTGCRYSE+ANIPWSA+++ Sbjct: 181 SALLRELDPERLRARINASKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANIPWSAINL 240 Query: 241 EAGTIHVYRSKVSNEDRLYMTARLRDVFIRRHANKRPDGRYVFENKAGKERGYSTQAIKK 300 + TI +YRSKV NED L+MT+RL + RR +R RYVFE++ G ERGYST++IKK Sbjct: 241 DTCTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKK 300 Query: 301 AIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDPKMTQRYAH 360 AI+RAGLN P +VKE+GG+VT H LRH++ASKLVK GVSL+EVSVLLGHSDPKMTQRYAH Sbjct: 301 AIERAGLNDPVLVKERGGRVTLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAH 360 Query: 361 LAPNDASRKAVGIIDSI 377 L+PNDASRKAV +IDS+ Sbjct: 361 LSPNDASRKAVKVIDSL 377 >ref|ZP_02507223.1| phage integrase [Burkholderia pseudomallei BCC215] Length = 382 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 237/377 (62%), Positives = 302/377 (80%) Query: 1 MGLIKRNNTANWYYQFQVRGKKYLGSTGTSNKTKAMQVERELRNKIHAELFLGQAETITL 60 M LI+RNN+ NWYYQFQ++GKK+ GSTGT NKTKA QVERE+RN+ HAE +LG A+ ITL Sbjct: 1 MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITL 60 Query: 61 AAALKLYLDARKNLPYHSGMMAISRKLAGYKLHAKTKEKIPCYGLPQNIQLHELQTRDIE 120 AL+ Y++AR YH M +I RK GYKLH +TK K+PCYG+ + LHEL TRD++ Sbjct: 61 KDALEQYVEARSETSYHRNMCSIVRKTLGYKLHPRTKAKLPCYGMSPDRLLHELTTRDVD 120 Query: 121 RLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREIIFPTFKTTSRVRYLDEIEE 180 LV +RKAEGD PAT+KHE+GL+R+T+ EM KLG++V+REIIFP +T+ R+RYLD +E Sbjct: 121 LLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSREIIFPELRTSYRLRYLDSSDE 180 Query: 181 AALLRELNPETLRDGLKPLETRNSELQRNLQDNYDIVIALLDTGCRYSEIANIPWSAVDI 240 +ALL EL+PE L+ + + + E+ RN+QDNYDI + LLDTGCRYSE+ANIPWSA+++ Sbjct: 181 SALLLELDPERLKTRINSSKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANIPWSAINL 240 Query: 241 EAGTIHVYRSKVSNEDRLYMTARLRDVFIRRHANKRPDGRYVFENKAGKERGYSTQAIKK 300 + TI +YRSKV NED L+MT+RL + RR +R RYVFE++ G ERGYST++IKK Sbjct: 241 DTCTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKK 300 Query: 301 AIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDPKMTQRYAH 360 AI+RAGLN P +VKE+GG+VT H LRH++ASKLVK GVSL+EVSVLLGHSDPKMTQRYAH Sbjct: 301 AIERAGLNDPVLVKERGGRVTLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAH 360 Query: 361 LAPNDASRKAVGIIDSI 377 L+PNDASRKAV +IDS+ Sbjct: 361 LSPNDASRKAVKVIDSL 377 >gb|EGD03903.1| phage integrase family protein [Burkholderia sp. TJI49] Length = 381 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 237/377 (62%), Positives = 300/377 (79%) Query: 1 MGLIKRNNTANWYYQFQVRGKKYLGSTGTSNKTKAMQVERELRNKIHAELFLGQAETITL 60 M LI+RNN+ NWYYQFQ++GKK+ GSTGT NKTKA QVERE+RN+ HAE +LG ITL Sbjct: 1 MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDTPPITL 60 Query: 61 AAALKLYLDARKNLPYHSGMMAISRKLAGYKLHAKTKEKIPCYGLPQNIQLHELQTRDIE 120 AL+ Y++AR + YH M +I RK GYKLH +TK K+PCYG+ + LHEL TR + Sbjct: 61 KDALEEYVEARSDTSYHRNMCSIVRKTLGYKLHPRTKAKLPCYGMSPDTLLHELTTRGFD 120 Query: 121 RLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREIIFPTFKTTSRVRYLDEIEE 180 LV +RKAEGD AT+KHE+GL+R+T+ EM KLG++V+R+I+FP +T+ R+RYLD +E Sbjct: 121 LLVAKRKAEGDKAATIKHEIGLLRATINEMAKLGFKVSRDIVFPELRTSYRLRYLDSNDE 180 Query: 181 AALLRELNPETLRDGLKPLETRNSELQRNLQDNYDIVIALLDTGCRYSEIANIPWSAVDI 240 +ALLREL+PE LR + P + E+ RN+QDNYDI + LLDTGCRYSE+ANIPWSA++I Sbjct: 181 SALLRELDPERLRTRINPSKPLTPEMTRNMQDNYDITVFLLDTGCRYSEVANIPWSAINI 240 Query: 241 EAGTIHVYRSKVSNEDRLYMTARLRDVFIRRHANKRPDGRYVFENKAGKERGYSTQAIKK 300 +A TI +YRSKV NED L+MT+RL + RR +R RYVFE++ G ERGYST++IKK Sbjct: 241 DASTISLYRSKVRNEDVLHMTSRLETILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKK 300 Query: 301 AIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDPKMTQRYAH 360 AI+RAGLN P +VKE+GG+VT H LRH++ASKLVK GVSL+EVSVLLGHSDPKMTQRYAH Sbjct: 301 AIERAGLNDPALVKERGGRVTLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAH 360 Query: 361 LAPNDASRKAVGIIDSI 377 L+PNDASRKAV +IDS+ Sbjct: 361 LSPNDASRKAVKVIDSL 377 >ref|YP_620332.1| phage integrase [Burkholderia cenocepacia AU 1054] ref|YP_834572.1| phage integrase family protein [Burkholderia cenocepacia HI2424] gb|ABF75359.1| phage integrase [Burkholderia cenocepacia AU 1054] gb|ABK07679.1| phage integrase family protein [Burkholderia cenocepacia HI2424] Length = 381 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 238/377 (63%), Positives = 301/377 (79%) Query: 1 MGLIKRNNTANWYYQFQVRGKKYLGSTGTSNKTKAMQVERELRNKIHAELFLGQAETITL 60 M LI+RNN+ NWYYQFQ++GKK+ GSTGT NKTKA QVERE+RN+ HAE +LG A+ ITL Sbjct: 1 MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITL 60 Query: 61 AAALKLYLDARKNLPYHSGMMAISRKLAGYKLHAKTKEKIPCYGLPQNIQLHELQTRDIE 120 AL+ Y++AR YH M +I RK GYKLH +TK K+PCYG+ + LHEL TR + Sbjct: 61 KDALEQYVEARSETSYHRNMCSIVRKTLGYKLHPRTKAKLPCYGMSPDTLLHELTTRYFD 120 Query: 121 RLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREIIFPTFKTTSRVRYLDEIEE 180 LV +RKAEGD PAT+KHE+GL+R+T+ EM KLG++V+REI+FP +T+ R+RYLD +E Sbjct: 121 LLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSREIVFPELRTSYRLRYLDSNDE 180 Query: 181 AALLRELNPETLRDGLKPLETRNSELQRNLQDNYDIVIALLDTGCRYSEIANIPWSAVDI 240 +ALLREL+PE LR + + + E+ RN+QDNYDI + LLDTGCRYSE+AN PWSA+++ Sbjct: 181 SALLRELDPERLRARINASKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANTPWSAINL 240 Query: 241 EAGTIHVYRSKVSNEDRLYMTARLRDVFIRRHANKRPDGRYVFENKAGKERGYSTQAIKK 300 +A TI +YRSKV NED L+MT+RL + RR +R RYVFE++ G ERGYST++IKK Sbjct: 241 DACTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKK 300 Query: 301 AIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDPKMTQRYAH 360 AI+RAGLN P +VKE+GG+VT H LRH++ASKLVK GVSL+EVSVLLGHSDPKMTQRYAH Sbjct: 301 AIERAGLNDPVLVKERGGRVTLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAH 360 Query: 361 LAPNDASRKAVGIIDSI 377 L+PNDASRKAV IIDS+ Sbjct: 361 LSPNDASRKAVKIIDSL 377