BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0543.p (381 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04927984.1| hypothetical protein PACG_00528 [Pseudomonas ... 355 8e-96 ref|ZP_06879544.1| hypothetical protein PaerPAb_18046 [Pseudomon... 355 1e-95 ref|YP_001349125.1| hypothetical protein PSPA7_3771 [Pseudomonas... 354 1e-95 ref|ZP_01364909.1| hypothetical protein PaerPA_01002021 [Pseudom... 354 2e-95 ref|YP_791693.1| hypothetical protein PA14_44311 [Pseudomonas ae... 353 3e-95 >ref|ZP_04927984.1| hypothetical protein PACG_00528 [Pseudomonas aeruginosa C3719] gb|EAZ52103.1| hypothetical protein PACG_00528 [Pseudomonas aeruginosa C3719] Length = 385 Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats. Identities = 182/368 (49%), Positives = 242/368 (65%), Gaps = 4/368 (1%) Query: 16 LLLTGSTGFIGGALAARLIRTPRWERSLFLVRSANRNEGRARLASNLRLHGVSEDELQRL 75 +LLTG+TGF+GG++AA+LI FLVR+ +R +G RL NL +HGV E + L Sbjct: 19 ILLTGATGFLGGSVAAQLIAAGHGANLSFLVRAESRQQGLERLRGNLLMHGVDEADCLAL 78 Query: 76 SPDQILCGDLTGVERWI--DDPRLLQVSDVVNSAALASFGSHRSIFPTNVDGVLAMAHGL 133 +QILCGD W+ + PRL+QV V+N AA+ASF + +I+P NVDG A A L Sbjct: 79 RAEQILCGDFLDTS-WLARETPRLMQVERVINCAAVASFSKNPTIWPVNVDGTFAFADVL 137 Query: 134 SRGRPLRRFIQIGTGMSCGRNAPRPVSEDYSPADGVEHYLDYTASKYQAEQRLRTELPEL 193 SR + L+RF+ +GT M CG P+SE + + +DYTASK + E+R+R ELP L Sbjct: 138 SRSKRLKRFLHVGTAMCCGPQRESPISESWEFPAAEQQLVDYTASKAEIERRMREELPGL 197 Query: 194 PLVVARPSIVVGHTELGCAASGSIYWVFRLARALQAFPCELDQKIDVIPVDYCAEALHLL 253 PLVVARPSIVVGH LGC ASGSI+WVFR+ AL++F C LD++IDVIPVDYCAEAL L Sbjct: 198 PLVVARPSIVVGHRTLGCQASGSIFWVFRMGFALESFTCGLDEQIDVIPVDYCAEALIGL 257 Query: 254 LEKPTLKYAAYNISSGPNHACTFGEIDEAISVGIGEKKM-SRYRQTHYDSFLQMQDRFKD 312 KP L ++ Y+IS+G ACTFGEIDEA + G + RYR+ D ++ F+ Sbjct: 258 ALKPCLGHSLYHISAGHRAACTFGEIDEAFARANGAAPVGERYRKVEVDDLKELAKSFES 317 Query: 313 LIGPCNKRIVLKAIRSYGYFAAEEVLFDNQRLIEEGMRPPQPLTDYVTLCERTSKDILIA 372 IGP N R+VL+A+R Y FA LFDN RL+EEG+ P TDY+ +C ++S + I Sbjct: 318 RIGPANPRLVLRALRLYSGFADLNYLFDNNRLLEEGISAPPRFTDYLDVCVQSSSAVSIP 377 Query: 373 QQMKYDYK 380 QM++D+K Sbjct: 378 AQMQWDFK 385 >ref|ZP_06879544.1| hypothetical protein PaerPAb_18046 [Pseudomonas aeruginosa PAb1] gb|EGM16112.1| hypothetical protein PA15_22410 [Pseudomonas aeruginosa 152504] Length = 385 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 182/368 (49%), Positives = 242/368 (65%), Gaps = 4/368 (1%) Query: 16 LLLTGSTGFIGGALAARLIRTPRWERSLFLVRSANRNEGRARLASNLRLHGVSEDELQRL 75 +LLTG+TGF+GG++AA+LI FLVR+ +R +G RL NL +HGV E + L Sbjct: 19 ILLTGATGFLGGSVAAQLIAAGHGANLSFLVRAESRQQGLERLRGNLLMHGVDETDCLAL 78 Query: 76 SPDQILCGDLTGVERWI--DDPRLLQVSDVVNSAALASFGSHRSIFPTNVDGVLAMAHGL 133 +QILCGD W+ + PRL+QV V+N AA+ASF + +I+P NVDG A A L Sbjct: 79 RAEQILCGDFLDTS-WLARETPRLMQVERVINCAAVASFSKNPTIWPVNVDGTFAFADVL 137 Query: 134 SRGRPLRRFIQIGTGMSCGRNAPRPVSEDYSPADGVEHYLDYTASKYQAEQRLRTELPEL 193 SR + L+RF+ +GT M CG P+SE + + +DYTASK + E+R+R ELP L Sbjct: 138 SRSKRLKRFLHVGTAMCCGPQRESPISESWEFPAAEQQLVDYTASKAEIERRMRQELPGL 197 Query: 194 PLVVARPSIVVGHTELGCAASGSIYWVFRLARALQAFPCELDQKIDVIPVDYCAEALHLL 253 PLVVARPSIVVGH LGC ASGSI+WVFR+ AL++F C LD++IDVIPVDYCAEAL L Sbjct: 198 PLVVARPSIVVGHRTLGCQASGSIFWVFRMGFALESFTCGLDEQIDVIPVDYCAEALIGL 257 Query: 254 LEKPTLKYAAYNISSGPNHACTFGEIDEAISVGIGEKKM-SRYRQTHYDSFLQMQDRFKD 312 KP L ++ Y+IS+G ACTFGEIDEA + G + RYR+ D ++ F+ Sbjct: 258 ALKPCLGHSLYHISAGHRAACTFGEIDEAFARANGAAPVGERYRKVEVDDLKELAKSFES 317 Query: 313 LIGPCNKRIVLKAIRSYGYFAAEEVLFDNQRLIEEGMRPPQPLTDYVTLCERTSKDILIA 372 IGP N R+VL+A+R Y FA LFDN RL+EEG+ P TDY+ +C ++S + I Sbjct: 318 RIGPANPRLVLRALRLYSGFADLNYLFDNSRLLEEGISAPPRFTDYLDVCVQSSSAVSIP 377 Query: 373 QQMKYDYK 380 QM++D+K Sbjct: 378 AQMQWDFK 385 >ref|YP_001349125.1| hypothetical protein PSPA7_3771 [Pseudomonas aeruginosa PA7] gb|ABR86037.1| hypothetical protein PSPA7_3771 [Pseudomonas aeruginosa PA7] Length = 385 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 182/377 (48%), Positives = 248/377 (65%), Gaps = 4/377 (1%) Query: 7 LSAELSSSMLLLTGSTGFIGGALAARLIRTPRWERSLFLVRSANRNEGRARLASNLRLHG 66 ++A + +LLTG+TGF+GG++AARLI FLVR+ +R +G RL NL +HG Sbjct: 10 ITATDTRERILLTGATGFLGGSVAARLIADGHGANLSFLVRAESRQQGLERLRGNLLMHG 69 Query: 67 VSEDELQRLSPDQILCGDLTGVERWI--DDPRLLQVSDVVNSAALASFGSHRSIFPTNVD 124 V+E + L +QI+CGD W+ + RL+QV V+N AA+ASF + +I+P NVD Sbjct: 70 VAEIDYMALGTEQIICGDFLDTS-WLARETLRLMQVERVINCAAVASFSKNPTIWPVNVD 128 Query: 125 GVLAMAHGLSRGRPLRRFIQIGTGMSCGRNAPRPVSEDYSPADGVEHYLDYTASKYQAEQ 184 G A A LSR + L+RF+ +GT M CG P+SE + + +DYTASK + E+ Sbjct: 129 GTFAFAEVLSRSKRLKRFLHVGTAMCCGPQRQSPISESWEFPAAEQQLVDYTASKAEIER 188 Query: 185 RLRTELPELPLVVARPSIVVGHTELGCAASGSIYWVFRLARALQAFPCELDQKIDVIPVD 244 R+R ELP LPLVVARPSIVVGH LGC ASGSI+WVFR+ AL++F C L+++IDVIPVD Sbjct: 189 RMREELPGLPLVVARPSIVVGHRTLGCQASGSIFWVFRMGFALESFTCGLEEQIDVIPVD 248 Query: 245 YCAEALHLLLEKPTLKYAAYNISSGPNHACTFGEIDEAISVGIGEKKM-SRYRQTHYDSF 303 YCAEAL L KP L ++ Y+IS+G + ACTFGEIDEA + G + RYR+ D Sbjct: 249 YCAEALIGLALKPRLGHSLYHISAGHHAACTFGEIDEAFARANGAAPVGGRYRKVDVDDL 308 Query: 304 LQMQDRFKDLIGPCNKRIVLKAIRSYGYFAAEEVLFDNQRLIEEGMRPPQPLTDYVTLCE 363 ++ F+ IGP N R+VL+A+R Y FA LFDN RL+EEG+ PP TDY+ +C Sbjct: 309 KELAKSFESRIGPANPRLVLRALRLYSGFADLNYLFDNSRLLEEGIAPPPRFTDYLDVCV 368 Query: 364 RTSKDILIAQQMKYDYK 380 ++S + I QM++D+K Sbjct: 369 QSSSAVSIPAQMQWDFK 385 >ref|ZP_01364909.1| hypothetical protein PaerPA_01002021 [Pseudomonas aeruginosa PACS2] ref|YP_002441352.1| hypothetical protein PLES_37691 [Pseudomonas aeruginosa LESB58] ref|ZP_04933230.1| Hypothetical protein PA2G_00538 [Pseudomonas aeruginosa 2192] ref|ZP_07792796.1| hypothetical protein PA39016_000460031 [Pseudomonas aeruginosa 39016] gb|EAZ57349.1| Hypothetical protein PA2G_00538 [Pseudomonas aeruginosa 2192] emb|CAW28496.1| hypothetical protein PLES_37691 [Pseudomonas aeruginosa LESB58] gb|EFQ37892.1| hypothetical protein PA39016_000460031 [Pseudomonas aeruginosa 39016] gb|EGM14017.1| hypothetical protein PA13_26271 [Pseudomonas aeruginosa 138244] dbj|GAA17105.1| hypothetical protein NCGM1179_1929 [Pseudomonas aeruginosa NCMG1179] gb|AEO75971.1| hypothetical protein PAM18_3488 [Pseudomonas aeruginosa M18] dbj|BAK89307.1| hypothetical protein NCGM2_2449 [Pseudomonas aeruginosa NCGM2.S1] Length = 385 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 182/368 (49%), Positives = 242/368 (65%), Gaps = 4/368 (1%) Query: 16 LLLTGSTGFIGGALAARLIRTPRWERSLFLVRSANRNEGRARLASNLRLHGVSEDELQRL 75 +LLTG+TGF+GG++AA+LI FLVR+ +R +G RL NL +HGV E + L Sbjct: 19 ILLTGATGFLGGSVAAQLIAAGHGANLSFLVRAESRQQGLERLRGNLLMHGVDEADCLAL 78 Query: 76 SPDQILCGDLTGVERWI--DDPRLLQVSDVVNSAALASFGSHRSIFPTNVDGVLAMAHGL 133 +QILCGD W+ + PRL+QV V+N AA+ASF + +I+P NVDG A A L Sbjct: 79 RAEQILCGDFLDTS-WLARETPRLMQVERVINCAAVASFSKNPTIWPVNVDGTFAFADVL 137 Query: 134 SRGRPLRRFIQIGTGMSCGRNAPRPVSEDYSPADGVEHYLDYTASKYQAEQRLRTELPEL 193 SR + L+RF+ +GT M CG P+SE + + +DYTASK + E+R+R ELP L Sbjct: 138 SRSKRLKRFLHVGTAMCCGPQRESPISESWEFPAAEQQLVDYTASKAEIERRMREELPGL 197 Query: 194 PLVVARPSIVVGHTELGCAASGSIYWVFRLARALQAFPCELDQKIDVIPVDYCAEALHLL 253 PLVVARPSIVVGH LGC ASGSI+WVFR+ AL++F C LD++IDVIPVDYCAEAL L Sbjct: 198 PLVVARPSIVVGHRTLGCQASGSIFWVFRMGFALESFTCGLDEQIDVIPVDYCAEALIGL 257 Query: 254 LEKPTLKYAAYNISSGPNHACTFGEIDEAISVGIGEKKM-SRYRQTHYDSFLQMQDRFKD 312 KP L ++ Y+IS+G ACTFGEIDEA + G + RYR+ D ++ F+ Sbjct: 258 ALKPCLGHSLYHISAGHRAACTFGEIDEAFARANGAAPVGERYRKVEVDDLKELAKSFES 317 Query: 313 LIGPCNKRIVLKAIRSYGYFAAEEVLFDNQRLIEEGMRPPQPLTDYVTLCERTSKDILIA 372 IGP N R+VL+A+R Y FA LFDN RL+EEG+ P TDY+ +C ++S + I Sbjct: 318 RIGPANPRLVLRALRLYSGFADLNYLFDNSRLLEEGISAPPRFTDYLDVCVQSSSAVSIP 377 Query: 373 QQMKYDYK 380 QM++D+K Sbjct: 378 AQMQWDFK 385 >ref|YP_791693.1| hypothetical protein PA14_44311 [Pseudomonas aeruginosa UCBPP-PA14] gb|ABJ15632.1| hypothetical protein PA14_44311 [Pseudomonas aeruginosa UCBPP-PA14] Length = 385 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 181/368 (49%), Positives = 242/368 (65%), Gaps = 4/368 (1%) Query: 16 LLLTGSTGFIGGALAARLIRTPRWERSLFLVRSANRNEGRARLASNLRLHGVSEDELQRL 75 +LLTG+TGF+GG+++A+LI FLVR+ +R +G RL NL +HGV E + L Sbjct: 19 ILLTGATGFLGGSVSAQLIAAGHGANLSFLVRAESRQQGLERLRGNLLMHGVDETDCLAL 78 Query: 76 SPDQILCGDLTGVERWI--DDPRLLQVSDVVNSAALASFGSHRSIFPTNVDGVLAMAHGL 133 +QILCGD W+ + PRL+QV V+N AA+ASF + +I+P NVDG A A L Sbjct: 79 RAEQILCGDFLDTS-WLARETPRLMQVERVINCAAVASFSKNPTIWPVNVDGTFAFADVL 137 Query: 134 SRGRPLRRFIQIGTGMSCGRNAPRPVSEDYSPADGVEHYLDYTASKYQAEQRLRTELPEL 193 SR + L+RF+ +GT M CG P+SE + + +DYTASK + E+R+R ELP L Sbjct: 138 SRSKRLKRFLHVGTAMCCGPQRESPISESWEFPAAEQQLVDYTASKAEIERRMREELPGL 197 Query: 194 PLVVARPSIVVGHTELGCAASGSIYWVFRLARALQAFPCELDQKIDVIPVDYCAEALHLL 253 PLVVARPSIVVGH LGC ASGSI+WVFR+ AL++F C LD++IDVIPVDYCAEAL L Sbjct: 198 PLVVARPSIVVGHRTLGCQASGSIFWVFRMGFALESFTCGLDEQIDVIPVDYCAEALIGL 257 Query: 254 LEKPTLKYAAYNISSGPNHACTFGEIDEAISVGIGEKKM-SRYRQTHYDSFLQMQDRFKD 312 KP L ++ Y+IS+G ACTFGEIDEA + G + RYR+ D ++ F+ Sbjct: 258 ALKPCLGHSLYHISAGHRAACTFGEIDEAFARANGAAPVGERYRKVEVDDLKELAKSFES 317 Query: 313 LIGPCNKRIVLKAIRSYGYFAAEEVLFDNQRLIEEGMRPPQPLTDYVTLCERTSKDILIA 372 IGP N R+VL+A+R Y FA LFDN RL+EEG+ P TDY+ +C ++S + I Sbjct: 318 RIGPANPRLVLRALRLYSGFADLNYLFDNSRLLEEGISAPPRFTDYLDVCVQSSSAVSIP 377 Query: 373 QQMKYDYK 380 QM++D+K Sbjct: 378 AQMQWDFK 385