BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0542.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_556540.1| putative alanyl-tRNA synthetase [Burkholderia x... 315 2e-84 ref|YP_373741.1| metal-dependent hydrolase [Burkholderia sp. 383... 307 6e-82 ref|YP_004754868.1| alanyl-tRNA synthetase domain-containing pro... 307 7e-82 ref|YP_004349243.1| metal-dependent hydrolase [Burkholderia glad... 291 4e-77 ref|NP_900005.1| alanyl-tRNA synthetase [Chromobacterium violace... 270 7e-71 >ref|YP_556540.1| putative alanyl-tRNA synthetase [Burkholderia xenovorans LB400] gb|ABE37190.1| Putative alanyl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 213 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 150/211 (71%), Positives = 175/211 (82%) Query: 1 MTHKLFWSAPYQTELDTTVTAVDGDQVQIAQTIFFAFSGGQESDAGTLGGHPVLQAEKRD 60 MT K+FW PYQT LDT V+ VDG+QVQ+ TIFFAFSGGQESD G+L G+PV++AEK Sbjct: 1 MTRKVFWDEPYQTALDTIVSQVDGEQVQVEATIFFAFSGGQESDCGSLAGYPVIKAEKLG 60 Query: 61 QTIVYTLPPGHGLRVGDAVYLQIDWARRYRLMRLHFAAEMVLQLVYQMRPGIERIGAHIA 120 IVYTLP H L VGD V +IDW RRYRLMRLHFAAEMVLQLVY++RPGIERIGAHIA Sbjct: 61 LEIVYTLPHDHSLSVGDCVTWRIDWERRYRLMRLHFAAEMVLQLVYRLRPGIERIGAHIA 120 Query: 121 MDKARVDFASDTSLAPLFPAIEASAQQLVSADLPIVTAFSDEQAGRRYWEVEGFARMACG 180 DKAR+DFASD SLAPLFP IE++A L + DL I+T FSD Q RRYW+V+GFA MACG Sbjct: 121 QDKARIDFASDVSLAPLFPEIESAAADLTARDLAILTDFSDVQTQRRYWKVDGFAMMACG 180 Query: 181 GTHPRTTAEVGSLKLKRKNTGRGKERIEILL 211 GTHP++T E+G++KLKRKNTGRGKERIE++L Sbjct: 181 GTHPKSTHEIGAVKLKRKNTGRGKERIEVIL 211 >ref|YP_373741.1| metal-dependent hydrolase [Burkholderia sp. 383] gb|ABB13097.1| metal-dependent hydrolase [Burkholderia sp. 383] Length = 226 Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats. Identities = 149/214 (69%), Positives = 175/214 (81%) Query: 1 MTHKLFWSAPYQTELDTTVTAVDGDQVQIAQTIFFAFSGGQESDAGTLGGHPVLQAEKRD 60 MT K+FW PY+T LDT V+ VDGD+VQ+ +TIFFAFSGGQESDAG+LGG+PV++A+K+ Sbjct: 1 MTKKVFWDDPYRTTLDTVVSHVDGDRVQVDETIFFAFSGGQESDAGSLGGYPVIRADKQG 60 Query: 61 QTIVYTLPPGHGLRVGDAVYLQIDWARRYRLMRLHFAAEMVLQLVYQMRPGIERIGAHIA 120 IVYTLP H L VGD V IDWARRYRLMRLHFAAEMVLQLVY++RPGIERIGAHI Sbjct: 61 LDIVYTLPHDHSLSVGDRVTWHIDWARRYRLMRLHFAAEMVLQLVYRLRPGIERIGAHIG 120 Query: 121 MDKARVDFASDTSLAPLFPAIEASAQQLVSADLPIVTAFSDEQAGRRYWEVEGFARMACG 180 DKAR+DFASDTS+APLFP IE++A L DL IVT FSD A RR+W V+GFA MACG Sbjct: 121 QDKARIDFASDTSVAPLFPEIESAAADLSKRDLRIVTDFSDVDAQRRFWTVDGFATMACG 180 Query: 181 GTHPRTTAEVGSLKLKRKNTGRGKERIEILLDAP 214 GTHP +T E+G L LKR+NTG+GKERIE++L P Sbjct: 181 GTHPASTGEIGMLTLKRRNTGKGKERIEVMLVEP 214 >ref|YP_004754868.1| alanyl-tRNA synthetase domain-containing protein [Collimonas fungivorans Ter331] gb|AEK64045.1| Alanyl-tRNA synthetase domain protein [Collimonas fungivorans Ter331] Length = 237 Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats. Identities = 148/211 (70%), Positives = 171/211 (81%) Query: 1 MTHKLFWSAPYQTELDTTVTAVDGDQVQIAQTIFFAFSGGQESDAGTLGGHPVLQAEKRD 60 MT KLFW PY+T L T V+AVD D++++A+TIFFAFSGGQESD GTL GHPVL AEK Sbjct: 14 MTRKLFWQDPYRTTLTTRVSAVDNDRIRLAETIFFAFSGGQESDHGTLAGHPVLSAEKDG 73 Query: 61 QTIVYTLPPGHGLRVGDAVYLQIDWARRYRLMRLHFAAEMVLQLVYQMRPGIERIGAHIA 120 I+YTL PGHGL+ G V + IDW RRYRLMRLHFAAEMVLQLVY++RPGIERIGAHI+ Sbjct: 74 LEILYTLAPGHGLQAGSEVEIVIDWERRYRLMRLHFAAEMVLQLVYKLRPGIERIGAHIS 133 Query: 121 MDKARVDFASDTSLAPLFPAIEASAQQLVSADLPIVTAFSDEQAGRRYWEVEGFARMACG 180 DK R+DFA + S+A L P +E L+ ADLPIVTAF+DE RRYWEV GFARMACG Sbjct: 134 ADKGRIDFAHEGSIAVLLPQVETEVAALLQADLPIVTAFTDEATQRRYWEVAGFARMACG 193 Query: 181 GTHPRTTAEVGSLKLKRKNTGRGKERIEILL 211 GTHPR+TAEVG+L+LKRKN G+GKERIEI L Sbjct: 194 GTHPRSTAEVGALRLKRKNIGKGKERIEISL 224 >ref|YP_004349243.1| metal-dependent hydrolase [Burkholderia gladioli BSR3] gb|AEA63731.1| metal-dependent hydrolase [Burkholderia gladioli BSR3] Length = 223 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 148/210 (70%), Positives = 166/210 (79%) Query: 2 THKLFWSAPYQTELDTTVTAVDGDQVQIAQTIFFAFSGGQESDAGTLGGHPVLQAEKRDQ 61 T K FW PY T LDTTV AVDG +V + +TIFFA SGGQESDAGTLGG+PVL A+K Sbjct: 3 TRKRFWDDPYLTHLDTTVLAVDGQRVHVRETIFFASSGGQESDAGTLGGYPVLHADKEGL 62 Query: 62 TIVYTLPPGHGLRVGDAVYLQIDWARRYRLMRLHFAAEMVLQLVYQMRPGIERIGAHIAM 121 +VYTLPP H LR GD V + ID ARR LMR HFAAEM+LQLVY+ RPGIERIGAHIA Sbjct: 63 DLVYTLPPDHQLRAGDGVAIWIDGARRLGLMRHHFAAEMILQLVYRARPGIERIGAHIAA 122 Query: 122 DKARVDFASDTSLAPLFPAIEASAQQLVSADLPIVTAFSDEQAGRRYWEVEGFARMACGG 181 DKAR+DFASDTSL+PL P +E A LV+ LPI TAFSD A RRYW+VEGFA M CGG Sbjct: 123 DKARIDFASDTSLSPLLPELEREAASLVARALPIHTAFSDIDAERRYWQVEGFASMPCGG 182 Query: 182 THPRTTAEVGSLKLKRKNTGRGKERIEILL 211 THPRTTAEVG+L LKR+NTG+GKE IEI+L Sbjct: 183 THPRTTAEVGALTLKRRNTGKGKECIEIVL 212 >ref|NP_900005.1| alanyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gb|AAQ58014.1| probable alanyl-tRNA synthetase related protein [Chromobacterium violaceum ATCC 12472] Length = 214 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 129/214 (60%), Positives = 167/214 (78%) Query: 1 MTHKLFWSAPYQTELDTTVTAVDGDQVQIAQTIFFAFSGGQESDAGTLGGHPVLQAEKRD 60 MT K FW+ PYQTEL T ++ VDG+++ +A+TIF+AFSGGQESD+G + GHPV AE++ Sbjct: 1 MTIKRFWADPYQTELATRISRVDGERMWLAETIFYAFSGGQESDSGRIAGHPVRLAERQG 60 Query: 61 QTIVYTLPPGHGLRVGDAVYLQIDWARRYRLMRLHFAAEMVLQLVYQMRPGIERIGAHIA 120 I YTL GHGL+ GDA ++IDW RRYRLMRLHFAAE+VL+++ + G+E+IGAHIA Sbjct: 61 ADIAYTLDAGHGLQAGDAAMVEIDWPRRYRLMRLHFAAELVLEVICRQVDGVEKIGAHIA 120 Query: 121 MDKARVDFASDTSLAPLFPAIEASAQQLVSADLPIVTAFSDEQAGRRYWEVEGFARMACG 180 DKAR+DFA D + PL I A+AQ+L++ DLPIV+AFSDE AGRRYWE+ GFAR+ CG Sbjct: 121 EDKARIDFALDLPITPLLADIAAAAQRLINDDLPIVSAFSDEAAGRRYWELPGFARVPCG 180 Query: 181 GTHPRTTAEVGSLKLKRKNTGRGKERIEILLDAP 214 GTH + + EVG + LKR+N G+GKER+EI L P Sbjct: 181 GTHLKRSGEVGRIALKRRNIGKGKERVEIYLLEP 214