BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0529.p         (286 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773942.1| hypothetical protein Hsero_0515 [Herbaspiril...   291   6e-77
ref|XP_002537265.1| conserved hypothetical protein [Ricinus comm...   275   5e-72

>ref|YP_003773942.1| hypothetical protein Hsero_0515 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62034.1| hypothetical protein Hsero_0515 [Herbaspirillum seropedicae SmR1]
          Length = 206

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 143/173 (82%), Positives = 162/173 (93%)

Query: 114 GCDRHIDQELAAHEAAQTTLGLTPKQFADRFNNRLADVLRDMKVEEPEHMAHLYMLDASR 173
           GCDR IDQ+LAAHEAAQTTLG+TPK+FA RFN RL DVL +M+V++PEHMAHLYMLDASR
Sbjct: 34  GCDRSIDQQLAAHEAAQTTLGVTPKEFAGRFNQRLRDVLTEMQVDDPEHMAHLYMLDASR 93

Query: 174 LHPGKYEYVLDTQVGPAQTTLIGTLNKKGELRNVGVMMTNKVPGARDEFLICASSTARSF 233
           LHPG+YEYVLDTQVGP+QTT+IGTLNK G+LRNVGVM+TNK PGAR+EFL+CA+S ARSF
Sbjct: 94  LHPGQYEYVLDTQVGPSQTTIIGTLNKSGQLRNVGVMLTNKTPGAREEFLVCAASAARSF 153

Query: 234 ISGSEDKLLPLITRLTTVALDNPGQRMTEVVADQLLSVELVPQGVLFQVQPRQ 286
           +   ++KLLPLITRLTTVALDNPGQRM+EVVADQLLSVELVPQGVLFQVQPRQ
Sbjct: 154 VDAGQEKLLPLITRLTTVALDNPGQRMSEVVADQLLSVELVPQGVLFQVQPRQ 206


>ref|XP_002537265.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF25117.1| conserved hypothetical protein [Ricinus communis]
          Length = 197

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 144/197 (73%), Positives = 171/197 (86%)

Query: 90  MLTLLRSPLRLLSCTLLATTLLSAGCDRHIDQELAAHEAAQTTLGLTPKQFADRFNNRLA 149
           M T LRSPLRL+ C +LA   L  GCDR ID++LA H AA+TTLG+TPK+FA RFN RL 
Sbjct: 1   MPTSLRSPLRLMLCAILALAALLCGCDRTIDKQLAEHTAAETTLGVTPKEFARRFNERLP 60

Query: 150 DVLRDMKVEEPEHMAHLYMLDASRLHPGKYEYVLDTQVGPAQTTLIGTLNKKGELRNVGV 209
           +VL DM+VEEP HMA+LY LD SRLHPG+YEYVL+T+VGPAQT+L+GTLNKKGELR VGV
Sbjct: 61  EVLSDMQVEEPAHMANLYKLDPSRLHPGQYEYVLETKVGPAQTSLLGTLNKKGELRAVGV 120

Query: 210 MMTNKVPGARDEFLICASSTARSFISGSEDKLLPLITRLTTVALDNPGQRMTEVVADQLL 269
           ++T++  GARDEFLICA S ARSFIS ++DKLLPLITRLT +AL+NPGQRMTEVV+DQLL
Sbjct: 121 LLTDRSQGARDEFLICADSAARSFISTAQDKLLPLITRLTGIALNNPGQRMTEVVSDQLL 180

Query: 270 SVELVPQGVLFQVQPRQ 286
           SVE+VPQG+LFQVQP+Q
Sbjct: 181 SVEIVPQGLLFQVQPQQ 197