BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0528.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773943.1| pyrophosphatase [Herbaspirillum seropedicae ...   202   1e-50
ref|YP_001890828.1| hypothetical protein Bphyt_7171 [Burkholderi...   146   1e-33
ref|YP_004751720.1| hypothetical protein CFU_1065 [Collimonas fu...   140   4e-32
ref|YP_003744008.1| hypothetical protein RCFBP_10036 [Ralstonia ...   134   3e-30
ref|ZP_08503652.1| hypothetical protein METUNv1_00656 [Methylove...   131   3e-29

>ref|YP_003773943.1| pyrophosphatase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62035.1| pyrophosphatase protein [Herbaspirillum seropedicae SmR1]
          Length = 137

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 107/130 (82%), Positives = 114/130 (87%)

Query: 10  AAAPSDLHELREIIRSFSSERDWLRFHTPKNLAMALSVEVAELMEHFQWLPTGADHELDD 69
           AA  SDLHELR +IR F SERDWLRFHTPKNLAMALSVEVAEL+EHFQWLPTGADHELDD
Sbjct: 7   AAPISDLHELRVMIRQFCSERDWLRFHTPKNLAMALSVEVAELLEHFQWLPTGADHELDD 66

Query: 70  AAREGIRHEMADVLVYLIQLADHTGVDLRSAVLEKMELNRRKYPVELARGNARKYSALAG 129
           AAREGIRHEMADVLVYLIQLADHTGVDLRSAVLEKM+LN RKYPVELAR  A KY+ L  
Sbjct: 67  AAREGIRHEMADVLVYLIQLADHTGVDLRSAVLEKMQLNARKYPVELARCKADKYTTLGA 126

Query: 130 PAAGADAGDD 139
            +A + +G D
Sbjct: 127 ASATSASGGD 136


>ref|YP_001890828.1| hypothetical protein Bphyt_7171 [Burkholderia phytofirmans PsJN]
 gb|ACD21457.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
          Length = 123

 Score =  146 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 75/112 (66%), Positives = 88/112 (78%)

Query: 14  SDLHELREIIRSFSSERDWLRFHTPKNLAMALSVEVAELMEHFQWLPTGADHELDDAARE 73
           +DL ELRE+IR F SERDW +FHTPKNLA ALSVE +EL+E FQWL +G   ELD+A   
Sbjct: 8   NDLLELRELIRKFVSERDWDKFHTPKNLATALSVEASELLEPFQWLVSGDKSELDEAKET 67

Query: 74  GIRHEMADVLVYLIQLADHTGVDLRSAVLEKMELNRRKYPVELARGNARKYS 125
            IRHEMADVLVYL++LAD   VDL  AVLEKM LNR+KYP +  RG++RKYS
Sbjct: 68  AIRHEMADVLVYLVRLADKMDVDLFQAVLEKMALNRQKYPADKVRGDSRKYS 119


>ref|YP_004751720.1| hypothetical protein CFU_1065 [Collimonas fungivorans Ter331]
 gb|AEK60897.1| conserved hypothetical protein [Collimonas fungivorans Ter331]
          Length = 159

 Score =  140 bits (354), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 70/111 (63%), Positives = 83/111 (74%)

Query: 15  DLHELREIIRSFSSERDWLRFHTPKNLAMALSVEVAELMEHFQWLPTGADHELDDAAREG 74
           +   LRE +R F +ERDW +FHTPKNL+ AL VE AEL+EHFQWLPTG   EL     + 
Sbjct: 44  EFASLREEVRQFVAERDWDQFHTPKNLSAALCVEAAELLEHFQWLPTGGGDELAPGKLQQ 103

Query: 75  IRHEMADVLVYLIQLADHTGVDLRSAVLEKMELNRRKYPVELARGNARKYS 125
           +RHEMADVLVYL++LAD   VDLR+AV EKM LNR KYP +  RG+ARKYS
Sbjct: 104 VRHEMADVLVYLVRLADKLNVDLRAAVSEKMVLNRLKYPADKVRGDARKYS 154


>ref|YP_003744008.1| hypothetical protein RCFBP_10036 [Ralstonia solanacearum CFBP2957]
 emb|CAQ17794.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
 emb|CBJ41354.1| conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 134

 Score =  134 bits (338), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 70/112 (62%), Positives = 84/112 (75%)

Query: 14  SDLHELREIIRSFSSERDWLRFHTPKNLAMALSVEVAELMEHFQWLPTGADHELDDAARE 73
           SDL  LR+++R F  ERDW +FHTPKNLA+ALSVE +EL+E FQWL +G   EL +A   
Sbjct: 8   SDLVALRDLVREFVRERDWEKFHTPKNLAIALSVEASELLEPFQWLVSGDRLELGEARMT 67

Query: 74  GIRHEMADVLVYLIQLADHTGVDLRSAVLEKMELNRRKYPVELARGNARKYS 125
            +RHEMADVLVYL+ LAD   VDL  AV EKM++NR KYP E  RG+ARKYS
Sbjct: 68  AVRHEMADVLVYLLSLADKLNVDLFQAVQEKMDINRAKYPAEKVRGDARKYS 119


>ref|ZP_08503652.1| hypothetical protein METUNv1_00656 [Methyloversatilis universalis
           FAM5]
 gb|EGK72828.1| hypothetical protein METUNv1_00656 [Methyloversatilis universalis
           FAM5]
          Length = 120

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 69/114 (60%), Positives = 86/114 (75%), Gaps = 2/114 (1%)

Query: 11  AAPSDLHELREIIRSFSSERDWLRFHTPKNLAMALSVEVAELMEHFQWLPTGADHELDDA 70
           A  + L  LR+++R F  ERDW +FHTPKNLAMA+S+E AE+MEHFQWLPTG   EL D 
Sbjct: 5   ADTARLDRLRDLVRQFVDERDWAQFHTPKNLAMAMSIEAAEVMEHFQWLPTG--RELADD 62

Query: 71  AREGIRHEMADVLVYLIQLADHTGVDLRSAVLEKMELNRRKYPVELARGNARKY 124
            R  + HE+ADVLVYL++LAD   +DL +AV EKM+LNR KYP +  RG+ARKY
Sbjct: 63  KRTAVGHELADVLVYLVRLADVLDIDLPAAVAEKMQLNREKYPADRVRGDARKY 116