BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0522.p (503 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773950.1| Na+-dependent transporter protein [Herbaspir... 452 e-125 gb|EFV85125.1| bile acid:sodium symporter [Achromobacter xylosox... 392 e-106 ref|ZP_06687129.1| sodium/bile acid symporter family protein [Ac... 391 e-106 gb|EGP44529.1| sodium bile acid symporter family protein 3 [Achr... 387 e-105 ref|YP_003978357.1| sodium bile acid symporter family protein 3 ... 378 e-102 >ref|YP_003773950.1| Na+-dependent transporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ62042.1| Na+-dependent transporter protein [Herbaspirillum seropedicae SmR1] Length = 305 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 269/305 (88%), Positives = 285/305 (93%) Query: 199 MHIASNAAISLLFFLHGAKLSREAALSGLKQPRLHLLTLASTFILFPLLGLALKSAVPDL 258 MH+ASN AISLLFFLHGAKLSREAAL+GLKQPRLHLLTL STF+LFPLLGL LK+ PDL Sbjct: 1 MHVASNVAISLLFFLHGAKLSREAALAGLKQPRLHLLTLGSTFLLFPLLGLGLKAVAPDL 60 Query: 259 LTPQLWMGVLFVCTLSSTVQSSIGFTSIARGNVPAAICGATASNLLGIIITPLLVTLLLH 318 LTPQLWMGVLFVCTLSSTVQSSIGFTSIARGNVPAAICGATASNLLGI++TPLLVTLLLH Sbjct: 61 LTPQLWMGVLFVCTLSSTVQSSIGFTSIARGNVPAAICGATASNLLGILVTPLLVTLLLH 120 Query: 319 RHHEANGMSQVLSILLQLLLPFVLGNLMRPWIGDWINRHKVIVNVVDRGGILLSVYAAFS 378 RHHEANG+SQVLSILLQLLLPFVLGNL+RPWIGDWINRHKVIVNVVDRGGILLSVYAAFS Sbjct: 121 RHHEANGLSQVLSILLQLLLPFVLGNLLRPWIGDWINRHKVIVNVVDRGGILLSVYAAFS 180 Query: 379 VAVAQGVWHLFPPGQLALLVLVNAVLLGTVLLVTTYGARALKMPRGDEIVLVFCGSKKSL 438 AVAQG+WHLFPPGQLALLVLVNA+LLG VLL+TTYGARALKMPRGDEIVLVFCGSKKSL Sbjct: 181 AAVAQGIWHLFPPGQLALLVLVNAMLLGAVLLITTYGARALKMPRGDEIVLVFCGSKKSL 240 Query: 439 ASGIPIASVLFAGSGAAVVLLPIMLFHQMQLMLCAVLARRYAARQESEQTGEHPQQKGVP 498 ASGIPIASVLFAGSGAAVVLLPIMLFHQMQLMLCAVLARRYAA+Q+ + Q+ Sbjct: 241 ASGIPIASVLFAGSGAAVVLLPIMLFHQMQLMLCAVLARRYAAQQDHLDADDASSQRAAT 300 Query: 499 AAATR 503 A +R Sbjct: 301 LAGSR 305 >gb|EFV85125.1| bile acid:sodium symporter [Achromobacter xylosoxidans C54] Length = 328 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 210/324 (64%), Positives = 254/324 (78%) Query: 167 MNRFLPDRFTQLLIGTVLLATFFPATGSFEHFMHIASNAAISLLFFLHGAKLSREAALSG 226 M RFLPD+FT +LI TV A+FFPA G FM +ASN AISLLFFLHGA+LS +A ++G Sbjct: 1 MRRFLPDQFTLILIATVAFASFFPAVGKGASFMMVASNVAISLLFFLHGARLSTDAIVAG 60 Query: 227 LKQPRLHLLTLASTFILFPLLGLALKSAVPDLLTPQLWMGVLFVCTLSSTVQSSIGFTSI 286 +K RLH L L TFILFP LGLAL++ P LLTP LW+GV+FVCTLSSTVQSSI FTS+ Sbjct: 61 VKDVRLHALILGCTFILFPALGLALRAMFPGLLTPSLWLGVIFVCTLSSTVQSSIAFTSM 120 Query: 287 ARGNVPAAICGATASNLLGIIITPLLVTLLLHRHHEANGMSQVLSILLQLLLPFVLGNLM 346 ARGNVP AIC ATASNLLG ++TPLLV +LLHR +G++ ILLQLLLPF +G+L+ Sbjct: 121 ARGNVPGAICAATASNLLGTVLTPLLVAVLLHRQGGGHGLADAGRILLQLLLPFAVGSLL 180 Query: 347 RPWIGDWINRHKVIVNVVDRGGILLSVYAAFSVAVAQGVWHLFPPGQLALLVLVNAVLLG 406 RPWIG W R+ +++ VDR ILL+VY AFS AVAQG+WH FP LA +VLVNA+LLG Sbjct: 181 RPWIGAWAQRNSRVLSKVDRSSILLAVYTAFSEAVAQGIWHAFPAIDLATMVLVNALLLG 240 Query: 407 TVLLVTTYGARALKMPRGDEIVLVFCGSKKSLASGIPIASVLFAGSGAAVVLLPIMLFHQ 466 +VLLVTT+G+R L + + +EI LVFCGSKKSLASGIP+A+VLF S +V+LP+M+FHQ Sbjct: 241 SVLLVTTWGSRKLGLSKENEITLVFCGSKKSLASGIPLATVLFGTSQMGIVVLPLMIFHQ 300 Query: 467 MQLMLCAVLARRYAARQESEQTGE 490 MQLM+CAVLARRYA R E Q E Sbjct: 301 MQLMVCAVLARRYADRAEPTQAAE 324 >ref|ZP_06687129.1| sodium/bile acid symporter family protein [Achromobacter piechaudii ATCC 43553] gb|EFF75979.1| sodium/bile acid symporter family protein [Achromobacter piechaudii ATCC 43553] Length = 327 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 210/323 (65%), Positives = 252/323 (78%) Query: 167 MNRFLPDRFTQLLIGTVLLATFFPATGSFEHFMHIASNAAISLLFFLHGAKLSREAALSG 226 M RFLPD+FT +LI TV A+FFPA G FM +ASN AISLLFFLHGA+LS +A ++G Sbjct: 1 MRRFLPDQFTLILIATVAFASFFPAVGKGASFMMVASNVAISLLFFLHGARLSTDAIVAG 60 Query: 227 LKQPRLHLLTLASTFILFPLLGLALKSAVPDLLTPQLWMGVLFVCTLSSTVQSSIGFTSI 286 +K RLH L L TFILFP LGL L++ P LLTP LW+GVLFVCTLSSTVQSSI FTS+ Sbjct: 61 VKDVRLHALILGCTFILFPALGLGLRAMFPGLLTPSLWLGVLFVCTLSSTVQSSIAFTSM 120 Query: 287 ARGNVPAAICGATASNLLGIIITPLLVTLLLHRHHEANGMSQVLSILLQLLLPFVLGNLM 346 ARGNVP AIC ATASNLLG ++TPLLV +LLHR +G++ ILLQLLLPF +G+L+ Sbjct: 121 ARGNVPGAICAATASNLLGTVLTPLLVAVLLHRQGGGHGLADAGRILLQLLLPFAVGSLL 180 Query: 347 RPWIGDWINRHKVIVNVVDRGGILLSVYAAFSVAVAQGVWHLFPPGQLALLVLVNAVLLG 406 RPWIG W R+ ++ VDR ILL+VY AFS AVAQG+WH FP LA +VLVNA+LLG Sbjct: 181 RPWIGAWAQRNSRTLSKVDRSSILLAVYTAFSEAVAQGIWHAFPAIDLASMVLVNALLLG 240 Query: 407 TVLLVTTYGARALKMPRGDEIVLVFCGSKKSLASGIPIASVLFAGSGAAVVLLPIMLFHQ 466 TVL++TT+G+R L + + +EI LVFCGSKKSLASGIP+A+VLF S VV+LP+M+FHQ Sbjct: 241 TVLVITTWGSRKLGLSKENEITLVFCGSKKSLASGIPLATVLFGTSQMGVVVLPLMIFHQ 300 Query: 467 MQLMLCAVLARRYAARQESEQTG 489 MQLM+CAVLARRYA RQE Q Sbjct: 301 MQLMVCAVLARRYADRQEPAQVA 323 >gb|EGP44529.1| sodium bile acid symporter family protein 3 [Achromobacter xylosoxidans AXX-A] Length = 328 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 207/314 (65%), Positives = 250/314 (79%) Query: 167 MNRFLPDRFTQLLIGTVLLATFFPATGSFEHFMHIASNAAISLLFFLHGAKLSREAALSG 226 M RFLPD+FT +LI TV A+FFPA G FM +ASN AISLLFFLHGA+LS +A ++G Sbjct: 1 MRRFLPDQFTLILIATVAFASFFPAVGKGASFMLVASNLAISLLFFLHGARLSTDAIVAG 60 Query: 227 LKQPRLHLLTLASTFILFPLLGLALKSAVPDLLTPQLWMGVLFVCTLSSTVQSSIGFTSI 286 +K RLH L L TFILFP LGLAL++A P LLTP LW+GV+FVCTLSSTVQSSI FTS+ Sbjct: 61 VKDVRLHALILGCTFILFPALGLALRAAFPGLLTPALWLGVIFVCTLSSTVQSSIAFTSM 120 Query: 287 ARGNVPAAICGATASNLLGIIITPLLVTLLLHRHHEANGMSQVLSILLQLLLPFVLGNLM 346 ARGNVP AIC ATASNLLG ++TPLLV +LLHR +G++ ILLQLLLPF +G+L+ Sbjct: 121 ARGNVPGAICAATASNLLGTVLTPLLVAVLLHRQGGGHGLADAGRILLQLLLPFAVGSLL 180 Query: 347 RPWIGDWINRHKVIVNVVDRGGILLSVYAAFSVAVAQGVWHLFPPGQLALLVLVNAVLLG 406 RPWIG W R+ I++ VDR ILL+VY AFS AVAQG+WH FP LA +VLVNA+LLG Sbjct: 181 RPWIGAWAQRNSRILSKVDRSSILLAVYTAFSEAVAQGIWHAFPAIDLATMVLVNALLLG 240 Query: 407 TVLLVTTYGARALKMPRGDEIVLVFCGSKKSLASGIPIASVLFAGSGAAVVLLPIMLFHQ 466 VLL+TT+G+R L + + +EI LVFCGSKKSLASGIP+A+VLF S +V+LP+M+FHQ Sbjct: 241 AVLLITTWGSRELGLSKENEITLVFCGSKKSLASGIPLATVLFGTSQMGIVVLPLMIFHQ 300 Query: 467 MQLMLCAVLARRYA 480 MQLM+CAVLARRYA Sbjct: 301 MQLMVCAVLARRYA 314 >ref|YP_003978357.1| sodium bile acid symporter family protein 3 [Achromobacter xylosoxidans A8] gb|ADP15642.1| sodium bile acid symporter family protein 3 [Achromobacter xylosoxidans A8] Length = 327 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 211/317 (66%), Positives = 254/317 (80%) Query: 167 MNRFLPDRFTQLLIGTVLLATFFPATGSFEHFMHIASNAAISLLFFLHGAKLSREAALSG 226 M RFLPD+FT +LI TV+ A+FFPA G FM +ASN AISLLFFLHGA+LS +A ++G Sbjct: 1 MRRFLPDQFTLILIATVVFASFFPAVGQGAAFMTVASNIAISLLFFLHGARLSTDAIVAG 60 Query: 227 LKQPRLHLLTLASTFILFPLLGLALKSAVPDLLTPQLWMGVLFVCTLSSTVQSSIGFTSI 286 +K RLH L LA TF+LFP LGL L++ P+LLTP LW+GVLFVCTLSSTVQSSI FTS+ Sbjct: 61 VKDVRLHALILACTFVLFPALGLGLRALFPNLLTPSLWLGVLFVCTLSSTVQSSIAFTSM 120 Query: 287 ARGNVPAAICGATASNLLGIIITPLLVTLLLHRHHEANGMSQVLSILLQLLLPFVLGNLM 346 ARGNVP AIC ATASNLLG ++TPLLV +LLHR +G++ ILLQLLLPF +G+L+ Sbjct: 121 ARGNVPGAICAATASNLLGTVLTPLLVAVLLHRQGGGHGLADAGRILLQLLLPFAVGSLL 180 Query: 347 RPWIGDWINRHKVIVNVVDRGGILLSVYAAFSVAVAQGVWHLFPPGQLALLVLVNAVLLG 406 RPWIG W R+ ++ VDR ILL+VY AFS AVAQG+WH FPP LA +VLVNA+LLG Sbjct: 181 RPWIGAWAQRNNRTLSKVDRSSILLAVYTAFSEAVAQGIWHAFPPIDLASMVLVNALLLG 240 Query: 407 TVLLVTTYGARALKMPRGDEIVLVFCGSKKSLASGIPIASVLFAGSGAAVVLLPIMLFHQ 466 TVLLVTT+G+R L + + +EI LVFCGSKKSLASGIP+A+VLF S VV+LP+M+FHQ Sbjct: 241 TVLLVTTWGSRKLGLSKENEITLVFCGSKKSLASGIPLATVLFGTSQMGVVVLPLMIFHQ 300 Query: 467 MQLMLCAVLARRYAARQ 483 MQLM+CAVLARRYA RQ Sbjct: 301 MQLMVCAVLARRYAERQ 317