BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0499.p (583 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773967.1| anion ABC transporter permease [Herbaspirill... 1041 0.0 ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease pr... 699 0.0 ref|ZP_01667139.1| binding-protein-dependent transport systems i... 512 e-143 ref|YP_001416175.1| binding-protein-dependent transport systems ... 467 e-129 ref|YP_474523.1| taurine ABC transporter permease protein [Synec... 467 e-129 >ref|YP_003773967.1| anion ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ62059.1| ABC-type anion transport system, duplicated permease component protein [Herbaspirillum seropedicae SmR1] Length = 581 Score = 1041 bits (2693), Expect = 0.0, Method: Composition-based stats. Identities = 573/581 (98%), Positives = 576/581 (99%) Query: 3 MKTTSPQLTAYEEVKPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPA 62 MKTTSPQLTAYEEVKPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPA Sbjct: 1 MKTTSPQLTAYEEVKPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPA 60 Query: 63 MIPYYAGRTLLRMWIAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSAT 122 MIPYYAGRTLLRMWIAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSAT Sbjct: 61 MIPYYAGRTLLRMWIAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSAT 120 Query: 123 VAGFMALFPGSLMGVECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAASTYRLTAWQR 182 VAGFMALFPGSLMGVECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAA+TYRLTAWQR Sbjct: 121 VAGFMALFPGSLMGVECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQR 180 Query: 183 FRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHT 242 FRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHT Sbjct: 181 FRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHT 240 Query: 243 AALWAVIAMLALILVSDQLVWRPLLAWADKFKIELTESTSPPTSWVYDLLRGSYVFTWLD 302 AALWAVIAMLALILVSDQLVWRPLLAWADKFKIELTES+SPPTSWVYDLLRGSYVFTWLD Sbjct: 241 AALWAVIAMLALILVSDQLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLD 300 Query: 303 EKLWLPLGDWLARRRPATSAAPTPARITRERWTKRVITGAICGLLIFEALRGLVAAIDAL 362 EK W PLGDWLAR RP TSAAPTPARITRERWTKRV+TG ICGLLIFEALRGLVAAIDAL Sbjct: 301 EKCWQPLGDWLARHRPGTSAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDAL 360 Query: 363 HGAMSWSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGAS 422 HGAMSWSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGAS Sbjct: 361 HGAMSWSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGAS 420 Query: 423 FPVNMTFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYG 482 FPVNMTFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYG Sbjct: 421 FPVNMTFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYG 480 Query: 483 LSRWNLWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVT 542 LSRWNLWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVT Sbjct: 481 LSRWNLWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVT 540 Query: 543 KSGDTPLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 583 KSGDTPLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD Sbjct: 541 KSGDTPLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 581 >ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease protein [Verrucomicrobium spinosum DSM 4136] Length = 582 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 384/570 (67%), Positives = 448/570 (78%), Gaps = 4/570 (0%) Query: 17 KPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMW 76 + GFGW+D +V+ L GLLWS LHFG+GM VHFD + +D+S IPYYAGRTLLRMW Sbjct: 14 RQGFGWVDLVVMLALLGLLWSVLHFGRGMWVHFDEAKAPPLDTSVWNIPYYAGRTLLRMW 73 Query: 77 IAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMG 136 +AFA SL F GY AAK+R ARA+ILPALD+LQSVPVLGFLSATV GFMALFPGSL G Sbjct: 74 MAFACSLVFTFVVGYAAAKNRVARAVILPALDVLQSVPVLGFLSATVTGFMALFPGSLFG 133 Query: 137 VECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAASTYRLTAWQRFRTVELPASAHSLI 196 VECA IFAIFTGQVWNM FGFY+S+VTIP DM+EAASTY L WQRF TV+LPAS HSLI Sbjct: 134 VECACIFAIFTGQVWNMTFGFYNSLVTIPADMEEAASTYGLNRWQRFTTVQLPASMHSLI 193 Query: 197 WNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALIL 256 +NSMMSFGGGWFFVAQSEAISVMNK++KLPGLGSYMA A++ GD+ AALWAV AML +IL Sbjct: 194 FNSMMSFGGGWFFVAQSEAISVMNKNIKLPGLGSYMASAVETGDNRAALWAVAAMLLIIL 253 Query: 257 VSDQLVWRPLLAWADKFKIELTESTSPPTSWVYDLLRGSYVFTWLDEKLWLPLGDW---L 313 SDQLVWRPLLAWADK+++ELTES SPP SW+YDLLR +YVF W + +L PL DW L Sbjct: 254 ASDQLVWRPLLAWADKYRMELTESGSPPRSWLYDLLRRAYVFEWFNHRL-EPLCDWIRHL 312 Query: 314 ARRRPATSAAPTPARITRERWTKRVITGAICGLLIFEALRGLVAAIDALHGAMSWSLFGH 373 R + +R+ R + + + + GLVAA+ + +S + G+ Sbjct: 313 TFRLTTVEPSRPQSRVPMGSLVVRGLGLVVLAWVGSKCATGLVAAVVNVRDHVSPAQMGN 372 Query: 374 IVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVV 433 I G T+LRVL MT +ATLIW PVGVWIG +P +ARFAQPLAQ+ ASFPVNMTFP VV Sbjct: 373 IAMAGLFTLLRVLVMTTLATLIWVPVGVWIGLRPGVARFAQPLAQMAASFPVNMTFPFVV 432 Query: 434 GWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLI 493 G++VA ++ M WGSI L+AMGTQWYILFNV+AGAMAIPNDLKEAAR YGL WNLW+TLI Sbjct: 433 GFYVAWHIPMGWGSIFLMAMGTQWYILFNVVAGAMAIPNDLKEAARTYGLRGWNLWRTLI 492 Query: 494 LPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIAS 553 LPAIFP+WVTGACTAAGGAWNASIVAELA+WG LKA+GLGA ++ T GD P+II S Sbjct: 493 LPAIFPYWVTGACTAAGGAWNASIVAELATWGPTQLKANGLGATLAEATHQGDKPVIICS 552 Query: 554 IGVMSMFVVLMNKFVWRRLYAFAERRFRLD 583 I +MS+FVVLMN+ +WRRLY AERRFRLD Sbjct: 553 IAMMSLFVVLMNRVLWRRLYRLAERRFRLD 582 >ref|ZP_01667139.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] gb|EAX47041.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] Length = 580 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 278/576 (48%), Positives = 386/576 (67%), Gaps = 20/576 (3%) Query: 20 FGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAF 79 FG ID LV+A +F LL+S L+ G GM++ F P +Q+E+ + PA +PYYAGR+LLRM+IA+ Sbjct: 13 FGLIDILVIAFVFALLFSVLYLGAGMVIPFSPENQIEISTDPADLPYYAGRSLLRMFIAY 72 Query: 80 AFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVEC 139 SL F G +AAKSR A +++P LDILQSVPVLGFLS T+ F+ LFP SL+GVE Sbjct: 73 GASLLFTFIYGSIAAKSRTAEKVLVPLLDILQSVPVLGFLSVTITMFIGLFPNSLLGVEL 132 Query: 140 AAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAASTYRLTAWQRFRTVELPASAHSLIWNS 199 A+IFAIFTGQ WNM F FYHS+ T+P D++EAA+ RL WQRF +E+P + SL+WNS Sbjct: 133 ASIFAIFTGQCWNMTFSFYHSLTTLPQDLKEAAAVLRLNWWQRFIKLEVPFAMISLVWNS 192 Query: 200 MMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSD 259 MMSFGG WFF+A SEAI+V+N+D++LPG+GS+MA A+++G+ +A +A++ M+ +I++ D Sbjct: 193 MMSFGGAWFFLAASEAITVLNQDIRLPGVGSFMAAAVEKGNMSAVGYAILTMIIMIMLVD 252 Query: 260 QLVWRPLLAWADKFKIELTESTSPPTSWVYDLLRGSYVFTWLDEKLWLPLGDWL--ARRR 317 QL WRP++ W+ KFK+E TE+ TS VYD+L+ + W + + P+ + A R Sbjct: 253 QLFWRPIVVWSQKFKMERTEAIEVSTSLVYDILKRAVFVAWAQKYFFGPITQLIDSAFNR 312 Query: 318 PATSAAPTPARITR----------ERWTKRVITGAICGLLIFEALRGLVAAIDALHGAMS 367 A + A+I +W + T G ++ + L +M Sbjct: 313 CARVSGKVAAQIEHLTPLSYLTVAMKWALLLATIYYVGQQTYQGI--------LLIASMG 364 Query: 368 WSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNM 427 + I+ LGF T+ RV A ++I L PVGVWIG+ P +++F QP+ Q+ ASFP NM Sbjct: 365 FDKLVKIITLGFYTLGRVTAASLIGVLWTVPVGVWIGTNPRLSKFFQPIVQVTASFPANM 424 Query: 428 TFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWN 487 +P VV ++ ++ GSILL+ +GTQWYILFNVIAGAMAIP DLKEA+ ++ LS W Sbjct: 425 IYPFVVVLYLNYGINFELGSILLMMLGTQWYILFNVIAGAMAIPTDLKEASTVFKLSGWQ 484 Query: 488 LWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDT 547 W+ LILPAIFP +TG TA+GGAWNASIV+EL +W D L A GLG +I VT++GD Sbjct: 485 KWRKLILPAIFPHLITGCITASGGAWNASIVSELVTWKDQQLNATGLGNFIGQVTEAGDW 544 Query: 548 PLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 583 I+ I VM FV+++N+ WRRLY AE ++ L+ Sbjct: 545 SGILGGIIVMCAFVIIINRLFWRRLYHLAETKYHLN 580 >ref|YP_001416175.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gb|ABS66518.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 582 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 278/565 (49%), Positives = 366/565 (64%), Gaps = 9/565 (1%) Query: 24 DALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAFAFSL 83 DAL +LFG L +H GK L D V PAM+P YA RT +RM A SL Sbjct: 22 DALAFGLLFGGLILMVHGGKETLAPLAALDLAPVSLDPAMLPEYALRTTMRMLAAIVASL 81 Query: 84 FFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECAAIF 143 F G LAAKSRRA +++P LDILQSVPVLGFLS TV GFM+LFPG ++GVE AAIF Sbjct: 82 VFTFAYGALAAKSRRAEMVLVPMLDILQSVPVLGFLSFTVVGFMSLFPGRVLGVELAAIF 141 Query: 144 AIFTGQVWNMAFGFYHSMVTIPTDMQEAASTYRLTAWQRFRTVELPASAHSLIWNSMMSF 203 AIFT Q WNM F FY S+ T+P D+ EA ++RL+ WQRF +E+P S L+WN+MMS Sbjct: 142 AIFTSQAWNMTFSFYQSLKTVPRDLDEATRSFRLSGWQRFWRLEVPFSMPGLVWNTMMSM 201 Query: 204 GGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQLVW 263 GGWFFV SEAISV + + LPG+GSY+A AI + + A WAV+AMLA+IL+ DQL++ Sbjct: 202 SGGWFFVVASEAISVGDTTITLPGVGSYVALAIKEQNLAAVGWAVLAMLAVILLYDQLLF 261 Query: 264 RPLLAWADKFKIELTESTSPPTSWVYDLLRGSYVFTWLDEKLWLPLGDWLA---RRRPAT 320 RPL+AWADKF++E + S + P SW+ R +Y+F +++ PLG LA R+R A Sbjct: 262 RPLVAWADKFRVETSASGAAPRSWLLSAARRTYLF----QRVLQPLGAMLAAVPRQRLAF 317 Query: 321 SA--APTPARITRERWTKRVITGAICGLLIFEALRGLVAAIDALHGAMSWSLFGHIVWLG 378 SA + R+ W G L+ A L + + ++ + LG Sbjct: 318 SAPVSQDTRRVVESAWASPWAEGIWLALVFAVAGYALYVIVAFVGTELTLPEVTQVFGLG 377 Query: 379 FLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVVGWFVA 438 LTM+RV+ + +ATLIW P+GVWIG +P A+ QPLAQ A+FP N+ FP V V Sbjct: 378 VLTMIRVIVLIALATLIWVPIGVWIGLRPRWAQRVQPLAQFLAAFPANIIFPFAVVAIVR 437 Query: 439 ANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILPAIF 498 + + L+ +GTQWYILFNV+AGA A PNDLKEAA + + WN W+ ++LP IF Sbjct: 438 LGLDPDIWLSPLMVLGTQWYILFNVVAGASAFPNDLKEAASTFRIRGWNWWRKVMLPGIF 497 Query: 499 PFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIGVMS 558 P++VTGA TA+GG+WNASIVAE+ASWGD +L+A G+GAYI+ T +GD P I+ + VMS Sbjct: 498 PYYVTGAITASGGSWNASIVAEVASWGDTTLRAHGVGAYIADATAAGDYPRIVLGVAVMS 557 Query: 559 MFVVLMNKFVWRRLYAFAERRFRLD 583 +FV+ N+ +WR ++ FA RR RLD Sbjct: 558 IFVIFFNRLLWRPMFTFAGRRLRLD 582 >ref|YP_474523.1| taurine ABC transporter permease protein [Synechococcus sp. JA-3-3Ab] gb|ABC99260.1| NitT/TauT family ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 575 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 278/572 (48%), Positives = 362/572 (63%), Gaps = 22/572 (3%) Query: 21 GWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQL-EVDSSPAMIPYYAGRTLLRMWIAF 79 G D ++ LL G G F P + +D P +PYYA R+ LRM+IA Sbjct: 16 GAADGAIILGTLVLLGLVAQVGAGTFERFQPPAVVPHIDLDPRNLPYYAARSTLRMFIAL 75 Query: 80 AFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVEC 139 AFS F + GY+AAKSR A +++P LDILQSVPVLGFLS TV GF+ALFPGSL+G+E Sbjct: 76 AFSTLFTLIYGYIAAKSRWAERILIPLLDILQSVPVLGFLSITVTGFIALFPGSLLGLEA 135 Query: 140 AAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAASTYRLTAWQRFRTVELPASAHSLIWNS 199 A+IFAIFT QVWNM F FY S+ T+P ++ EA + YRL+ WQRF +E+PA+ LIWN+ Sbjct: 136 ASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAVTLYRLSGWQRFVQLEVPAAMVGLIWNA 195 Query: 200 MMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSD 259 MMSFGGGWFFVA SEAISV+N++ LPGLGSY+ A+ D WA++ M +IL+ D Sbjct: 196 MMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAVVILLVD 255 Query: 260 QLVWRPLLAWADKFKIELTESTSPPTSWVYDLLRGS----YVFTWL--DEKLWLPLGDWL 313 QL WRPL+AW+DKF++E + + P SW+YDLL + + WL +L L L Sbjct: 256 QLFWRPLVAWSDKFRLEQSAGAAAPESWLYDLLTTARIPRLIGNWLAPSRELADRLLSHL 315 Query: 314 ARRRPATSAAPTPARITRERWTKRVITGAICGLLIFEALRGLVAAIDALHGAMSWSLFGH 373 R R P R RER ++ AI G+ I+ +V + G FG Sbjct: 316 TRLRWGDPPNPEAER-RRERLLTQLSWAAIAGIGIW-----IVYFVTTTVG------FGE 363 Query: 374 IVW---LGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFP 430 ++ LG LT+LRV + V AT+IWTP+GV IG P +A+ QP+ Q A+FP N FP Sbjct: 364 VLLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNPGLAKLLQPVVQFLAAFPANFLFP 423 Query: 431 LVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWK 490 +F+ +S+ WGSILL+++G QWYILFN IAGA +IP DL+E A GL W W+ Sbjct: 424 FATLFFIRTQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGWQRWQ 483 Query: 491 TLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLI 550 LI+P IF WVTG TA+GGAWNASIV+E+ +WG +LKA GLG YI+ T GD P I Sbjct: 484 KLIIPGIFSAWVTGGITASGGAWNASIVSEIVAWGSTTLKATGLGTYIAEATAVGDWPRI 543 Query: 551 IASIGVMSMFVVLMNKFVWRRLYAFAERRFRL 582 IG+MS+FVV +N+ WRRLY AE ++ L Sbjct: 544 TLGIGMMSLFVVGINRLFWRRLYQLAEEKYHL 575