BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0494.p (641 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773970.1| 2-polyprenyl-6-methoxyphenol hydroxylase [He... 885 0.0 ref|YP_582494.1| FAD-dependent oxidoreductase [Cupriavidus metal... 793 0.0 ref|YP_298415.1| FAD-dependent oxidoreductase [Ralstonia eutroph... 777 0.0 ref|YP_004681738.1| 3-(3-hydroxy-phenyl)propionate/3-hydroxycinn... 763 0.0 ref|ZP_06844543.1| monooxygenase FAD-binding [Burkholderia sp. C... 756 0.0 >ref|YP_003773970.1| 2-polyprenyl-6-methoxyphenol hydroxylase [Herbaspirillum seropedicae SmR1] gb|ADJ62062.1| 2-polyprenyl-6-methoxyphenol hydroxylase protein [Herbaspirillum seropedicae SmR1] Length = 589 Score = 885 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 447/557 (80%), Positives = 477/557 (85%), Gaps = 7/557 (1%) Query: 58 MNPTPAIDYQQQRFMYQPCLEQTRPADAALHPVVVIGAGPVGLVTAIDLARQGIRVVLVD 117 MN PAIDYQQQRF + PC EQ P A +HPVV+IGAGPVGL AIDLARQGI VVLVD Sbjct: 1 MNQNPAIDYQQQRFAWTPCAEQQSPGHAPVHPVVIIGAGPVGLACAIDLARQGIAVVLVD 60 Query: 118 DDDTLSTGSRAICFAKRTLDIFDRIGCGQRMVDKGVGWNRGKVFLREEAIYEFDLLPECG 177 DDDTLSTGSRAICFAKRTLDIFDRIGCGQRMVDKGVGWNRGKVFLR++A+YEFDLLPE G Sbjct: 61 DDDTLSTGSRAICFAKRTLDIFDRIGCGQRMVDKGVGWNRGKVFLRDQAVYEFDLLPESG 120 Query: 178 HARPAFINLQQYYVEGYLLEQARQHSLIELRWKSRVSAIAHHADHEALTVETPEGSYLLK 237 HARPAFINLQQYYVEGYLLEQA+Q IE+RWK++VSAIAHH DHEALTV+TP+GSY LK Sbjct: 121 HARPAFINLQQYYVEGYLLEQAQQWPHIEIRWKNKVSAIAHHEDHEALTVDTPQGSYTLK 180 Query: 238 ARYVVAADGSRSPLRKMMGLESVGHTFRDRFLIADVKMAAPFPAERWFWFDPPFHPNQSV 297 ARYVVAADGSRSPLRKMMGLES GHTFRDRFLIADVKM APFPAERWFWFDPPFHP QSV Sbjct: 181 ARYVVAADGSRSPLRKMMGLESQGHTFRDRFLIADVKMDAPFPAERWFWFDPPFHPQQSV 240 Query: 298 LLHRQPDDVWRIDFQLGWDADPVLERTPERVIPRVQALLGKDAQFTLEWVSVYTFSCVRM 357 LLHRQPDDVWRIDFQLGWDADPVLE+TPERVIPRV+ALLG++ F+LEWVSVYTFSCVRM Sbjct: 241 LLHRQPDDVWRIDFQLGWDADPVLEKTPERVIPRVRALLGEEVSFSLEWVSVYTFSCVRM 300 Query: 358 DRFRHGRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLAFVLQGKAPDSLLDSYASER 417 +RFRHGRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLA VLQGKAPDSLLDSYASER Sbjct: 301 ERFRHGRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLAHVLQGKAPDSLLDSYASER 360 Query: 418 EFAADENLLNSTRSTDFITPKSAVSRCFRDAVLALAREHAFARRLVNSGRLSLPATLHGS 477 E+AADENLLNSTRSTDFITPKSAVSR FRDAVL LAREHAFARRLVNSGRLSLPATL S Sbjct: 361 EYAADENLLNSTRSTDFITPKSAVSRAFRDAVLGLAREHAFARRLVNSGRLSLPATLDQS 420 Query: 478 PLSSADSA------PFHGAMQAGAPCTDAPVLTDTIPGWLLPHLGDQFVAMIFAPPASLS 531 PL++ D A F G M+ GAPC DAP+L P WLLP LGD+FV MIFA PA L Sbjct: 421 PLNTPDQAAAPEAVAFTGPMRPGAPCCDAPLLQAGQPAWLLPQLGDRFVLMIFAAPAQLP 480 Query: 532 AALLPALVRLTEGSLPLRLLFVSGAQASAEDHTVLSALGDGAVQVQDIEGLVVQRYDGQP 591 AA AL L + LRLLF+S A+ ED VL L A+QVQDI+ L QRYD P Sbjct: 481 AATRQALAALAQPD-ALRLLFISAQAATQEDERVLQTLAGQAIQVQDIDTLAAQRYDAHP 539 Query: 592 HTCYLIRPDQHVCARWR 608 +CYLIRPDQHV ARWR Sbjct: 540 GSCYLIRPDQHVSARWR 556 >ref|YP_582494.1| FAD-dependent oxidoreductase [Cupriavidus metallidurans CH34] gb|ABF07225.1| Monooxygenase, FAD-binding:FAD dependent oxidoreductase [Cupriavidus metallidurans CH34] Length = 584 Score = 793 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 403/561 (71%), Positives = 455/561 (81%), Gaps = 6/561 (1%) Query: 64 IDYQQQRFMYQPCLEQTRP-ADAALHPVVVIGAGPVGLVTAIDLARQGIRVVLVDDDDTL 122 IDYQ+ ++ Y PC EQ +AA HPV+V+GAGP+GL TAIDLAR G+ VV+VDDD L Sbjct: 8 IDYQRIQYDYVPCAEQRGALTNAAPHPVIVVGAGPIGLATAIDLARHGVPVVVVDDDCML 67 Query: 123 STGSRAICFAKRTLDIFDRIGCGQRMVDKGVGWNRGKVFLREEAIYEFDLLPECGHARPA 182 S GSRAICFAKRTLDIFDR+GCG RMVDKGV WN GKVFLR+ +Y FDLLPE H RPA Sbjct: 68 SVGSRAICFAKRTLDIFDRLGCGDRMVDKGVRWNLGKVFLRDSQVYAFDLLPESDHQRPA 127 Query: 183 FINLQQYYVEGYLLEQARQHSLIELRWKSRVSAIAHHADHEALTVETPEGSYLLKARYVV 242 FINLQQYY+EGYLLE A+ IE+RWKS+ AI HADH LT+ETP+G Y L+ YVV Sbjct: 128 FINLQQYYLEGYLLECAQAMPNIEIRWKSKAVAIEQHADHVTLTIETPDGCYALRGAYVV 187 Query: 243 AADGSRSPLRKMMGLESVGHTFRDRFLIADVKMAAPFPAERWFWFDPPFHPNQSVLLHRQ 302 AADGSRSPLRKM+GLES GHTFRDRFLIADVKM APFPAERWFWFDPPFHPNQSVLLHRQ Sbjct: 188 AADGSRSPLRKMLGLESHGHTFRDRFLIADVKMEAPFPAERWFWFDPPFHPNQSVLLHRQ 247 Query: 303 PDDVWRIDFQLGWDADPVLERTPERVIPRVQALLGKDAQFTLEWVSVYTFSCVRMDRFRH 362 PD+VWRIDFQLGWDADP E+TPERV+PRVQALLG DA+F LEWVSVYTFSCVRMD FRH Sbjct: 248 PDNVWRIDFQLGWDADPAFEKTPERVLPRVQALLGPDAKFELEWVSVYTFSCVRMDSFRH 307 Query: 363 GRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLAFVLQGKAPDSLLDSYASEREFAAD 422 GRVLF GD+AHCVSPFGARGANSG+QDAENLAWKLA+VLQGKAP+SLLD+YASEREFAAD Sbjct: 308 GRVLFAGDSAHCVSPFGARGANSGVQDAENLAWKLAYVLQGKAPESLLDTYASEREFAAD 367 Query: 423 ENLLNSTRSTDFITPKSAVSRCFRDAVLALAREHAFARRLVNSGRLSLPATLHGSPLSSA 482 EN+LNSTRSTDFITPKSAVSR FRDAVL LAR+HAFAR+LVNSGRLS+PA L SPL++A Sbjct: 368 ENILNSTRSTDFITPKSAVSRIFRDAVLTLARDHAFARQLVNSGRLSVPAVLRDSPLNTA 427 Query: 483 DSAPFHGAMQAGAPCTDAPVLTDTIPGWLLPHLGDQFVAMIFAPPASLSAALLPALVRLT 542 D+ F G M GA C DAPV WLLPHLGD FVA+IF PA + AA AL +L Sbjct: 428 DAESFSGQMVPGAACVDAPVAGTEGKPWLLPHLGDDFVALIFGAPAGIDAACREALTQLL 487 Query: 543 EGSLPLRLLFVSGAQASAEDHTVLSALGDGAVQVQDIEGLVVQRYDGQPHTCYLIRPDQH 602 +G +PLR++FV+ A SA + GAV ++D G+ +RYD + TCYLIRPDQH Sbjct: 488 QGDIPLRVVFVTDAAISAS-----AEAWPGAVVLRDAGGVAARRYDARAGTCYLIRPDQH 542 Query: 603 VCARWRRVDAPAIGAALLRAS 623 VCARWR VDA I A+ RA+ Sbjct: 543 VCARWRAVDANQIAGAIARAT 563 >ref|YP_298415.1| FAD-dependent oxidoreductase [Ralstonia eutropha JMP134] gb|AAZ63571.1| Monooxygenase, FAD-binding:FAD dependent oxidoreductase [Ralstonia eutropha JMP134] Length = 579 Score = 777 bits (2007), Expect = 0.0, Method: Composition-based stats. Identities = 392/590 (66%), Positives = 455/590 (77%), Gaps = 17/590 (2%) Query: 58 MNPTPAIDYQQQRFMYQPCLEQTR-PADAALHPVVVIGAGPVGLVTAIDLARQGIRVVLV 116 M AIDYQ+ F YQPC +Q A A+HPVVV+GAGP+GL TAIDLA++G+RVVLV Sbjct: 1 MTIASAIDYQRLSFEYQPCADQRDGQAGGAVHPVVVVGAGPIGLATAIDLAQRGVRVVLV 60 Query: 117 DDDDTLSTGSRAICFAKRTLDIFDRIGCGQRMVDKGVGWNRGKVFLREEAIYEFDLLPEC 176 DDD TLSTGSRAICFAKRTLDIFDR+GCGQRMVD GV WN G+VFLR++ +Y FDLLPE Sbjct: 61 DDDCTLSTGSRAICFAKRTLDIFDRLGCGQRMVDTGVSWNVGRVFLRDQQVYSFDLLPEA 120 Query: 177 GHARPAFINLQQYYVEGYLLEQARQHSLIELRWKSRVSAIAHHA-----DHEALTVETPE 231 GH RPAFINLQQYYVEGYLLE+A++ IE+RW+++V + + ALT+ETP+ Sbjct: 121 GHHRPAFINLQQYYVEGYLLERAQELPNIEIRWRNKVVGLEQRQPGTPEETVALTIETPD 180 Query: 232 GSYLLKARYVVAADGSRSPLRKMMGLESVGHTFRDRFLIADVKMAAPFPAERWFWFDPPF 291 G Y L ARYVVAADGSRSP+RK++GL+S G TF+DRFLIADVKM A FPAERWFWFDPPF Sbjct: 181 GCYTLAARYVVAADGSRSPVRKLLGLDSKGRTFKDRFLIADVKMEADFPAERWFWFDPPF 240 Query: 292 HPNQSVLLHRQPDDVWRIDFQLGWDADPVLERTPERVIPRVQALLGKDAQFTLEWVSVYT 351 HP+QSVLLHRQPD+VWRIDFQLGWDADPVLE+TPERVIPRVQALLG DA+FTLEWVSVYT Sbjct: 241 HPHQSVLLHRQPDNVWRIDFQLGWDADPVLEKTPERVIPRVQALLGPDAKFTLEWVSVYT 300 Query: 352 FSCVRMDRFRHGRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLAFVLQGKAPDSLLD 411 FSC+RMD FRHG VLF GD+AH VSPFGARGANSG+QDAENLAWKLA+VL G+A DSLLD Sbjct: 301 FSCLRMDSFRHGNVLFAGDSAHGVSPFGARGANSGVQDAENLAWKLAYVLDGRAADSLLD 360 Query: 412 SYASEREFAADENLLNSTRSTDFITPKSAVSRCFRDAVLALAREHAFARRLVNSGRLSLP 471 +YASERE+AADEN+LNSTRSTDFITPKS VSR FRDAVL LAR HAFAR+LVNSGRLS+P Sbjct: 361 TYASEREYAADENILNSTRSTDFITPKSEVSRVFRDAVLGLARRHAFARKLVNSGRLSVP 420 Query: 472 ATLHGSPLSSADSAPFHGAMQAGAPCTDAPVLTDTIPGWLLPHLGDQFVAMIFAPPASLS 531 A LHGSPL++ D F M G C DAPV GWLL HLG +F ++F P SL Sbjct: 421 AVLHGSPLNTPDVDGFGDTMVPGTACVDAPVSDAHGAGWLLQHLGGEFTGLVFGSPDSLD 480 Query: 532 AALLPALVRLTEGSLPLRLLFVSGAQASAEDHTVLSALGDGAVQVQDIEGLVVQRYDGQP 591 AL ++ + LPLR++++ + + +L +D +GL QRY+ P Sbjct: 481 GDSRLALEQIEQSGLPLRIVYLGTSTQTVSGTAIL----------RDDKGLAAQRYNAAP 530 Query: 592 HTCYLIRPDQHVCARWRRVDAPAIGAALLRASGKITSPTSQAATPVLDAA 641 T YLIRPDQHVCARWRR+DA I AL RASG P S+A AA Sbjct: 531 GTFYLIRPDQHVCARWRRIDAQRIRDALARASGA-QLPASKALESAAMAA 579 >ref|YP_004681738.1| 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase MhpA [Cupriavidus necator N-1] gb|AEI80506.1| 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase MhpA [Cupriavidus necator N-1] Length = 574 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 380/553 (68%), Positives = 436/553 (78%), Gaps = 11/553 (1%) Query: 63 AIDYQQQRFMYQPCLEQTRPADAALHPVVVIGAGPVGLVTAIDLARQGIRVVLVDDDDTL 122 +IDYQ+ F YQPC EQ + AD A+HPVVV+GAGP+GL TAIDLA++G+RVVLVDDD TL Sbjct: 3 SIDYQRLSFEYQPCAEQQKGADPAIHPVVVVGAGPIGLATAIDLAQRGVRVVLVDDDCTL 62 Query: 123 STGSRAICFAKRTLDIFDRIGCGQRMVDKGVGWNRGKVFLREEAIYEFDLLPECGHARPA 182 STGSRAICF+KRTLDIFDR+GCG+RMVDKGV W+ GKVFLR++ +Y FDLLPE GH RPA Sbjct: 63 STGSRAICFSKRTLDIFDRLGCGERMVDKGVRWHVGKVFLRDQQVYSFDLLPESGHRRPA 122 Query: 183 FINLQQYYVEGYLLEQARQHSLIELRWKSRVSAIAHHADHEA---LTVETPEGSYLLKAR 239 FINLQQYYVEGYLLE+A+ IE+RW+++V + EA LT+ETPEG Y L AR Sbjct: 123 FINLQQYYVEGYLLERAQALPNIEIRWRNKVVGLEQRGTPEAGVVLTIETPEGCYPLGAR 182 Query: 240 YVVAADGSRSPLRKMMGLESVGHTFRDRFLIADVKMAAPFPAERWFWFDPPFHPNQSVLL 299 YVVAADGSRSP+RK++GL+S G TF DRFLIADVKM A FP+ERWFWFDPPFHPNQSVLL Sbjct: 183 YVVAADGSRSPMRKLLGLDSKGRTFHDRFLIADVKMEADFPSERWFWFDPPFHPNQSVLL 242 Query: 300 HRQPDDVWRIDFQLGWDADPVLERTPERVIPRVQALLGKDAQFTLEWVSVYTFSCVRMDR 359 HRQPD+VWRIDFQLGWDADPVLE+TPERVIPRVQALLGKD +F LEWVSVYTFSC+RMD Sbjct: 243 HRQPDNVWRIDFQLGWDADPVLEKTPERVIPRVQALLGKDVKFELEWVSVYTFSCLRMDS 302 Query: 360 FRHGRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLAFVLQGKAPDSLLDSYASEREF 419 FRHG +LF GDAAH VSPFGARGANSGIQDAENLAWKLA+VLQG A D LLD+YASERE+ Sbjct: 303 FRHGNILFAGDAAHGVSPFGARGANSGIQDAENLAWKLAYVLQGHACDKLLDTYASEREY 362 Query: 420 AADENLLNSTRSTDFITPKSAVSRCFRDAVLALAREHAFARRLVNSGRLSLPATLHGSPL 479 AADENL NSTRSTDFITPKSAVSR FRDAVL L+R HAFAR LVNSGRLS+PA L SPL Sbjct: 363 AADENLRNSTRSTDFITPKSAVSRVFRDAVLTLSRRHAFARTLVNSGRLSVPAVLQDSPL 422 Query: 480 SSADSAPFHGA-MQAGAPCTDAPVLTDTIPGWLLPHLGDQFVAMIFAPPASLSAALLPAL 538 ++AD A + + G C DAPV GWLL HLG F ++F P ++ A L L Sbjct: 423 NTADDAQGYACKLVPGTVCCDAPVSGAQGAGWLLSHLGGDFTVLLFGNPDAIDAGTLADL 482 Query: 539 VRLTEGSLPLRLLFVSGAQASAEDHTVLSALGDGAVQVQDIEGLVVQRYDGQPHTCYLIR 598 L + +PL+L++V+ A A T A ++D +GL RY P TCYLIR Sbjct: 483 AALKDSGVPLQLVYVTDAAQPAVTCT-------NATVLRDDKGLAAARYGATPGTCYLIR 535 Query: 599 PDQHVCARWRRVD 611 PDQHVCARW R D Sbjct: 536 PDQHVCARWHRPD 548 >ref|ZP_06844543.1| monooxygenase FAD-binding [Burkholderia sp. Ch1-1] gb|EFG67869.1| monooxygenase FAD-binding [Burkholderia sp. Ch1-1] Length = 569 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 376/568 (66%), Positives = 438/568 (77%), Gaps = 15/568 (2%) Query: 63 AIDYQQQRFMYQPCLEQTRP--ADAALHPVVVIGAGPVGLVTAIDLARQGIRVVLVDDDD 120 +I+YQ F YQPC EQ+ AD A +PV+V+GAGPVGL TAID+A+QG+ VVLVDDD Sbjct: 2 SINYQTLSFDYQPCREQSAQGGADQAAYPVIVVGAGPVGLATAIDVAQQGVPVVLVDDDC 61 Query: 121 TLSTGSRAICFAKRTLDIFDRIGCGQRMVDKGVGWNRGKVFLREEAIYEFDLLPECGHAR 180 +LSTGSRAICF+KR+LDIFDR+GCGQRMVDKG+ WN GKVFL++E +Y F+L PE GH R Sbjct: 62 SLSTGSRAICFSKRSLDIFDRLGCGQRMVDKGISWNVGKVFLKDELVYTFNLQPEAGHNR 121 Query: 181 PAFINLQQYYVEGYLLEQARQHSLIELRWKSRVSAIAHHADHE------ALTVETPEGSY 234 PAFINLQQYYVEG+LLE+A++ +E+RWKS+V + ALT++TP G Y Sbjct: 122 PAFINLQQYYVEGFLLERAQEMPNLEIRWKSKVVGVQQDGTPGTQDAGVALTIDTPNGQY 181 Query: 235 LLKARYVVAADGSRSPLRKMMGLESVGHTFRDRFLIADVKMAAPFPAERWFWFDPPFHPN 294 L+ RYVVAADGSRSP+R +MGL+S G TF+DRFLIADVKM A FP ERWFWFDPPFHPN Sbjct: 182 ALRGRYVVAADGSRSPIRNLMGLDSKGVTFKDRFLIADVKMEAEFPTERWFWFDPPFHPN 241 Query: 295 QSVLLHRQPDDVWRIDFQLGWDADPVLERTPERVIPRVQALLGKDAQFTLEWVSVYTFSC 354 QSVLLHRQPD+VWRIDFQLGWDADPVLE+TPERVIPRV+ALLG DA+F LEWVSVYTFSC Sbjct: 242 QSVLLHRQPDNVWRIDFQLGWDADPVLEKTPERVIPRVRALLGPDAKFELEWVSVYTFSC 301 Query: 355 VRMDRFRHGRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLAFVLQGKAPDSLLDSYA 414 +RMD FRHG VLF GD+AH VSPFGARGANSG+QDAENLAWKL VL+GKA D+LLD+YA Sbjct: 302 LRMDSFRHGNVLFAGDSAHGVSPFGARGANSGVQDAENLAWKLVMVLEGKASDALLDTYA 361 Query: 415 SEREFAADENLLNSTRSTDFITPKSAVSRCFRDAVLALAREHAFARRLVNSGRLSLPATL 474 +EREFAADEN+ NSTRSTDFITPKS VSR FRDAVL LAR H FAR+L NSGRLS+PA L Sbjct: 362 TEREFAADENIRNSTRSTDFITPKSPVSRVFRDAVLKLARHHPFARQLTNSGRLSVPAVL 421 Query: 475 HGSPLSSADSAPFHGAMQAGAPCTDAPVLTDTIPGWLLPHLGDQFVAMIFAPPASLSAAL 534 SPL++ADS F GAM GA C DAPV P WLL LG QF ++F + A Sbjct: 422 RDSPLNTADSDHFEGAMVPGASCVDAPVQVAEQPAWLLQQLGQQFTGLLFCGEHGVDQAT 481 Query: 535 LPALVRLTEGSLPLRLLFVSGAQASAEDHTVLSALGDGAVQVQDIEGLVVQRYDGQPHTC 594 L L G +PL+L+ V+ A ++ T GA DIEGLV RYD +P T Sbjct: 482 RATLDALRSGPIPLKLVVVTRDAAQSDAST-------GAQVAHDIEGLVHARYDAKPGTF 534 Query: 595 YLIRPDQHVCARWRRVDAPAIGAALLRA 622 YLIRPDQHVCARWR+V A + +AL RA Sbjct: 535 YLIRPDQHVCARWRKVAAGDVESALKRA 562