BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0490.p (993 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773974.1| multi-sensor hybrid histidine kinase [Herbas... 1102 0.0 ref|YP_001927407.1| PAS/PAC sensor hybrid histidine kinase [Meth... 583 e-164 ref|YP_002423327.1| PAS/PAC sensor hybrid histidine kinase [Meth... 582 e-163 ref|YP_003070686.1| sensor hybrid histidine kinase with multiple... 581 e-163 ref|YP_002965559.1| sensor hybrid histidine kinase with multiple... 580 e-163 >ref|YP_003773974.1| multi-sensor hybrid histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ62066.1| multi-sensor hybrid histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 845 Score = 1102 bits (2851), Expect = 0.0, Method: Composition-based stats. Identities = 575/718 (80%), Positives = 623/718 (86%), Gaps = 2/718 (0%) Query: 264 VQKEAIAELACLTRESERRRRFYESFLSTTPDLAYAWDLNHRFTYANRVLLQMWGKTWDE 323 ++ EA+AELA LT ESERRRRFYE+F +TTPDLAYAWDL HRFTYANRVLLQMWGKTWDE Sbjct: 124 LRHEAVAELARLTDESERRRRFYETFFATTPDLAYAWDLEHRFTYANRVLLQMWGKTWDE 183 Query: 324 AIGKNCLELGYEPWHAEMHSREIEQVRATKRPVRGDVPFNGTFGRRIYDYIIFPVLGPDG 383 AIGK CLELGYEPWHAEMHSREIEQVRATKRPVRGDVPFNGTFGRRIYDYIIFPVLGPDG Sbjct: 184 AIGKTCLELGYEPWHAEMHSREIEQVRATKRPVRGDVPFNGTFGRRIYDYIIFPVLGPDG 243 Query: 384 EVEAVAGTTRDVTERKNSEARQHALFRLAEAIRSAGSLGDIASAAAQIIGDALTARWVSY 443 EVEAVAGTTRDVT+RK+SEARQHAL LA+AIR+ S DIASAAA IIG+ALTARWVS+ Sbjct: 244 EVEAVAGTTRDVTDRKHSEARQHALLHLADAIRATDSPQDIASAAAHIIGEALTARWVSF 303 Query: 444 KSLGPAQQVEELGQWSFHQDDSAVAVLALHDERRVAQTVRSGSVMLVADVGTDARTAALR 503 +LGP +Q ++LGQW FH+DD A L H R + + + G MLVADV +DART AL Sbjct: 304 HTLGPQRQCQDLGQWRFHRDDDAERGLQAHARRPLQRVLEQGHPMLVADVSSDARTVALA 363 Query: 504 QEHLACGVASYMDVPLLDHEKLVGIVHVSSNLPRTWTDNELAIVREVSEQTRAAFERIRN 563 E A GV S+MDVP+L ++ V +V VSS+ PR WT+NELAIVREVSE+ AAFERIRN Sbjct: 364 DEQRALGVVSFMDVPVLAQDQPVALVQVSSDAPRVWTENELAIVREVSERACAAFERIRN 423 Query: 564 QQALAASEARLREINESLEAEVSARTRELMATEEALRHSQKIEAIGQLTGGLAHDFNNLL 623 Q+ALA SEARLR INESLEAEVSARTRELMATEEALRHSQKIEAIGQLTGGLAHDFNNLL Sbjct: 424 QRALAESEARLRAINESLEAEVSARTRELMATEEALRHSQKIEAIGQLTGGLAHDFNNLL 483 Query: 624 GGITGSLDLMRVRLVQGRGDELFRYIDLAARSAQRAASLTQRLLAFARRQTLDPRPTNVN 683 GGI+GSLDLMRVRLVQGRG+EL RY++LAARS QRAASLTQRLLAFARRQTL P+PT VN Sbjct: 484 GGISGSLDLMRVRLVQGRGEELLRYVELAARSTQRAASLTQRLLAFARRQTLAPKPTRVN 543 Query: 684 ALIGGMEELIRRTIGPAITLEVVTAVSLWPTFVDGPQLESALLNLCINARDAMPDGGRLT 743 ALI GMEELIRRTIGPAI LEVV A LWPTFVDGPQLESALLNLCINARDAMP GGRLT Sbjct: 544 ALISGMEELIRRTIGPAIVLEVVGAGGLWPTFVDGPQLESALLNLCINARDAMPGGGRLT 603 Query: 744 IETANKWLDDKWAQERDLPAGQYVCVSVTDNGSGMPPDVLARAFDPFFTTKPIGEGTGLG 803 IETANKWLDD+WA ERDLP GQYVC+SVTD+G GMPPDVLARAFDPFFTTKPIG GTGLG Sbjct: 604 IETANKWLDDRWAHERDLPPGQYVCISVTDSGVGMPPDVLARAFDPFFTTKPIGAGTGLG 663 Query: 804 LSMVYGFARQSGGQVRLYSELGQGSAVSLYLPRHQHAAQAEECEPAHLPSAA--GRGEVV 861 LSMVYGFARQSGGQVRLYSE+GQG+ VS+YLPRHQH ++ A +AA G GEVV Sbjct: 664 LSMVYGFARQSGGQVRLYSEVGQGTTVSIYLPRHQHDGDEQDEADALDETAAGDGNGEVV 723 Query: 862 LVVDDEAPIRLLVAEVLNEAGYVTLQAEDGPSALRILHSAARIDLLITDVGLPGGLNGRQ 921 LVVDDEA IR+LVAE+L++AGY LQAEDGP ALRIL S RIDLLITDVGLPGGLNGRQ Sbjct: 724 LVVDDEASIRMLVAEILSDAGYDVLQAEDGPGALRILQSKQRIDLLITDVGLPGGLNGRQ 783 Query: 922 VADAARAARPGLQVLFITGYAENAAVGNGHLPAGMQLMTKPFKMDLLARRVQDILESR 979 VADA RAARP L VLFITGYAENAA NGHL GMQLMTKPFKM+ LARRVQ ILESR Sbjct: 784 VADAGRAARPDLHVLFITGYAENAAFDNGHLERGMQLMTKPFKMEALARRVQSILESR 841 Score = 71.6 bits (174), Expect = 6e-10, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 67/138 (48%), Gaps = 5/138 (3%) Query: 18 AVALLPATPPARYPAAYLALDAQWRVVYADDAARALLGSSPGSGEATAGAVLWQVWPALA 77 + AL P PA P A+ ALD QWR V+ D A+ALL G+ G +WQ P L Sbjct: 2 STALSPDRLPALPPEAFFALDPQWRFVFLDSPAQALLNP---HGQDLLGRPIWQACPELL 58 Query: 78 GSLLEEALRATLADGQSRQC-LYTPAGQT-QSYEVICTPQAQGVAVSLRAGRREAQQLQQ 135 GS LEE LRA AD +SR L P Q +Y V C A G++V LRA + Sbjct: 59 GSPLEECLRAVQADQRSRDAVLIHPHHQPGPAYAVSCYAGAHGLSVKLRAIAAQPAAEHG 118 Query: 136 QRTDRKLHESETRFRLMT 153 + R HE+ +T Sbjct: 119 LQQTRLRHEAVAELARLT 136 >ref|YP_001927407.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium populi BJ001] gb|ACB82872.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium populi BJ001] Length = 1086 Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats. Identities = 386/862 (44%), Positives = 509/862 (59%), Gaps = 94/862 (10%) Query: 142 LHESETRFRLMTGAIPQIVLITNDAGVLEFINDQWHQYTG--EALHEGLASLDTMIVRHI 199 L ESE RFR M P ++ +T+ G +++N +W+++TG EA GL L+ + Sbjct: 293 LAESEARFRTMADDAPVMMWVTDADGACQYLNRRWYEFTGQTEAQALGLGWLEA-----V 347 Query: 200 HPEDRADTMAAWQHARSACMEVAIEHRIADARGQYRWFLTRGKPQLEAGSGRILHWYGTS 259 HP+DR + + A + ++E+R+ G YRW + P+ A GR L + G+ Sbjct: 348 HPDDRGWSGETFLTANARHEGFSLEYRLRRRDGAYRWAIDTASPRF-AADGRFLGYIGSV 406 Query: 260 TDIHVQKEAIAELACLTRESERRRRFYESFLSTTPDLAYAWDLNHR---FTYANRVLLQM 316 DI ++ A LA ESE R R L+ WD + R + R+ M Sbjct: 407 VDIEERRAAELALA----ESEERLR-----LAVESGEIGLWDFDPRAGTLFWPPRIK-AM 456 Query: 317 WGKTWDEAIGKNCLELGYEPWHAEMHSREIEQVRATKRPVRGDVPFNGTFGRRIYDYIIF 376 +G + + LE E H + +R A P GT R YD Sbjct: 457 FGLAPEADV---TLEDFSEGLHPDDRARVTAAFAAALDP--------GT--RAFYDEEFR 503 Query: 377 PVLGPDGEVEAVA-----------------GTTRDVTERKNSEARQHALFRLAEAIRSAG 419 V G DG + VA G+ D+T RK +E R L EA R Sbjct: 504 TVGGADGTIRWVAAKGRGVFDAEGHCLRGVGSAIDITARKATEER------LVEATRRLD 557 Query: 420 SLGDIASAAAQIIGDALTARWVSYKSLGPAQQVEELGQWSFHQDDSAVAVLALHDERRVA 479 ++ D A+ A ++ + +++ + E L ++ + ALHD V Sbjct: 558 AVLDNATQAIFMMDERQHCAYMN-------RAAERLTGYTLEETRGQ----ALHDV--VH 604 Query: 480 QTVRSGSVMLVADVGTDARTAALRQEHLACGVASYMDVPLLDHEKLVGIVHVSSNLPRTW 539 T GS + + D QE + + + S P + Sbjct: 605 HTRPDGSPYPLHECPIDQAFPENNQEQ----------------GEEIFVHRDGSFYPVAF 648 Query: 540 TDNELAIVREVSEQTRAAFERIRNQQALAASEARLREINESLEAEVSARTRELMATEEAL 599 T + +R+ RN +A ++A+L N SLE +V+ART ELM TEEAL Sbjct: 649 TASP---IRDEGGAPIGTVIEARNIEAELRAKAQLEAFNASLEQQVAARTAELMRTEEAL 705 Query: 600 RHSQKIEAIGQLTGGLAHDFNNLLGGITGSLDLMRVRLVQGRGDELFRYIDLAARSAQRA 659 R SQK+EA+GQLTGGLAHDFNNLL GITGSL+L++ RL QGR E+ RY++ A +A+RA Sbjct: 706 RQSQKMEAVGQLTGGLAHDFNNLLTGITGSLELLQTRLAQGRLTEIDRYVNAAQGAAKRA 765 Query: 660 ASLTQRLLAFARRQTLDPRPTNVNALIGGMEELIRRTIGPAITLEVVTAVSLWPTFVDGP 719 A+LT RLLAF+RRQTLDP+PT+VN L+ GMEEL+RRTIGP+ITLEVV A LW VD Sbjct: 766 AALTHRLLAFSRRQTLDPKPTDVNRLVMGMEELLRRTIGPSITLEVVAAGGLWSVLVDPS 825 Query: 720 QLESALLNLCINARDAMPDGGRLTIETANKWLDDKWAQERDLPAGQYVCVSVTDNGSGMP 779 QLE+ALLNLCINARDAMPDGGR+TIETAN+WLDD+ A+ERDL GQY+ + VTD G+GM Sbjct: 826 QLENALLNLCINARDAMPDGGRITIETANRWLDDRGARERDLDPGQYLSLCVTDTGTGMS 885 Query: 780 PDVLARAFDPFFTTKPIGEGTGLGLSMVYGFARQSGGQVRLYSELGQGSAVSLYLPRHQH 839 PDV+A+AFDPFFTTKPIG+GTGLGLSM+YGF RQSGGQVR+YSE+GQG+ + LYLPRH Sbjct: 886 PDVIAKAFDPFFTTKPIGQGTGLGLSMIYGFVRQSGGQVRIYSEVGQGTTMCLYLPRHYG 945 Query: 840 AAQAEECEPAHLPSAAGR---GEVVLVVDDEAPIRLLVAEVLNEAGYVTLQAEDGPSALR 896 A AEE +PA +AA R GE VL+VDDE +R+LV EVL + GY ++A DGPS L+ Sbjct: 946 A--AEEPDPAPDLAAAPRAEQGETVLIVDDEPTVRMLVTEVLEDLGYTAIEAADGPSGLK 1003 Query: 897 ILHSAARIDLLITDVGLPGGLNGRQVADAARAARPGLQVLFITGYAENAAVGNGHLPAGM 956 +L S RIDLL+TDVGLPGG+NGRQVADA R RP L+VLFITGYAENAAVGNGHL GM Sbjct: 1004 VLQSDVRIDLLVTDVGLPGGMNGRQVADAGRVLRPELKVLFITGYAENAAVGNGHLEPGM 1063 Query: 957 QLMTKPFKMDLLARRVQDILES 978 Q++TKPF M++LA R+++++ S Sbjct: 1064 QVITKPFVMEVLAGRIKEMISS 1085 >ref|YP_002423327.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium chloromethanicum CM4] gb|ACK85399.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium chloromethanicum CM4] Length = 1092 Score = 582 bits (1500), Expect = e-163, Method: Composition-based stats. Identities = 377/858 (43%), Positives = 503/858 (58%), Gaps = 84/858 (9%) Query: 142 LHESETRFRLMTGAIPQIVLITNDAGVLEFINDQWHQYTG--EALHEGLASLDTMIVRHI 199 L ESE RFR M P ++ +T G +++N +W+ +TG EA GL L+ + Sbjct: 299 LAESEARFRTMADDAPVMMWVTGPDGACQYLNRRWYDFTGQNEAQALGLGWLEA-----V 353 Query: 200 HPEDRADTMAAWQHARSACMEVAIEHRIADARGQYRWFLTRGKPQLEAGSGRILHWYGTS 259 HP+DR + + A + ++E+R+ G YRW + P+ A G L + G+ Sbjct: 354 HPDDRGWSGETFLRANARHEGFSLEYRLRRRDGVYRWAIDTASPRF-AADGSFLGYIGSV 412 Query: 260 TDIHVQKEAIAELACLTRESERRRRFYESFLSTTPDLAYAWDLNHR---FTYANRVLLQM 316 DI ++ A LA ESE R R L+ WD + R + R+ M Sbjct: 413 VDIEERRAAELALA----ESEERLR-----LAVESGEIGLWDFDPRAGTLFWPPRIK-AM 462 Query: 317 WGKTWDEAIGKNCLELGYEPWHAEMHSREI-------------EQVRATKRPVRGDVPFN 363 +G D + + G P + E+ RA R G V + Sbjct: 463 FGLAPDADVTLDDFADGLHPDDRARVTAAFAAALDPVARAFYDEEFRAIGR-ADGTVRWV 521 Query: 364 GTFGRRIYDYIIFPVLGPDGEVEAVAGTTRDVTERKNSEARQHALFRLAEAIRSAGSLGD 423 GR ++D +G G+ D+T RK +E R L EA R ++ D Sbjct: 522 AAKGRGVFD--------AEGRCLRGVGSAIDITARKATEER------LVEATRRLDAVLD 567 Query: 424 IASAAAQIIGDALTARWVSYKSLGPAQQVEELGQWSFHQDDSAVAVLALHDERRVAQTVR 483 A+ A ++ + +++ + E L +S + ALHD V T Sbjct: 568 NATQAIFMMDERQHCAYMN-------RAAERLTGYSLDETHGK----ALHDV--VHHTRP 614 Query: 484 SGSVMLVADVGTDARTAALRQEHLACGVASYMDVPLLDHEKLVGIVHVSSNLPRTWTDNE 543 GS + + D QE + + + S P +T + Sbjct: 615 DGSPYPLHECPIDQAFPENNQEQ----------------GQEIFVHRDGSFYPVAFTASP 658 Query: 544 LAIVREVSEQTRAAFERIRNQQALAASEARLREINESLEAEVSARTRELMATEEALRHSQ 603 +R+ RN + ++A+L N SLE +V+ART ELM TEEALR SQ Sbjct: 659 ---IRDEGGTPIGTVIEARNIEGELRAKAQLEAFNASLEQQVAARTAELMRTEEALRQSQ 715 Query: 604 KIEAIGQLTGGLAHDFNNLLGGITGSLDLMRVRLVQGRGDELFRYIDLAARSAQRAASLT 663 K+EA+GQLTGGLAHDFNNLL GITGSL+L++ RL QGR E+ RY++ A +A+RAA+LT Sbjct: 716 KMEAVGQLTGGLAHDFNNLLTGITGSLELLQTRLAQGRITEIDRYVNAAQGAAKRAAALT 775 Query: 664 QRLLAFARRQTLDPRPTNVNALIGGMEELIRRTIGPAITLEVVTAVSLWPTFVDGPQLES 723 RLLAF+RRQTLDP+PT+VN L+ GME+L+RRTIGP+ITLEVV A LW VD QLE+ Sbjct: 776 HRLLAFSRRQTLDPKPTDVNRLVMGMEDLLRRTIGPSITLEVVAAGGLWSVLVDPSQLEN 835 Query: 724 ALLNLCINARDAMPDGGRLTIETANKWLDDKWAQERDLPAGQYVCVSVTDNGSGMPPDVL 783 ALLNLCINARDAMPDGGR+TIETANKWLDD+ A+ERDL GQY+ + VTD+G+GM PDV+ Sbjct: 836 ALLNLCINARDAMPDGGRITIETANKWLDDRGAKERDLDPGQYLSLCVTDSGTGMSPDVI 895 Query: 784 ARAFDPFFTTKPIGEGTGLGLSMVYGFARQSGGQVRLYSELGQGSAVSLYLPRHQHAAQA 843 A+AFDPFFTTKPIG+GTGLGLSM+YGF RQSGGQVR+YSE+GQG+ + LYLPRH AA+ Sbjct: 896 AKAFDPFFTTKPIGQGTGLGLSMIYGFVRQSGGQVRIYSEVGQGTTMCLYLPRHYGAAEE 955 Query: 844 EECEP--AHLPSAAGRGEVVLVVDDEAPIRLLVAEVLNEAGYVTLQAEDGPSALRILHSA 901 E P A P A +GE VL+VDDE +R+LV EVL + GY ++A DGP+ L++L S Sbjct: 956 PEAAPDLAAAPRAE-QGETVLIVDDEPTVRMLVTEVLEDLGYTAIEAADGPAGLKVLQSD 1014 Query: 902 ARIDLLITDVGLPGGLNGRQVADAARAARPGLQVLFITGYAENAAVGNGHLPAGMQLMTK 961 R+DLL+TDVGLPGG+NGRQVADA R RP L+VLFITGYAENAAVGNGHL GMQ++TK Sbjct: 1015 VRLDLLVTDVGLPGGMNGRQVADAGRVLRPDLKVLFITGYAENAAVGNGHLEPGMQVITK 1074 Query: 962 PFKMDLLARRVQDILESR 979 PF M++LA R+++++ SR Sbjct: 1075 PFVMEVLAARIKEMINSR 1092 >ref|YP_003070686.1| sensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains [Methylobacterium extorquens DM4] emb|CAX26874.1| putative sensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains [Methylobacterium extorquens DM4] Length = 1092 Score = 581 bits (1498), Expect = e-163, Method: Composition-based stats. Identities = 377/858 (43%), Positives = 503/858 (58%), Gaps = 84/858 (9%) Query: 142 LHESETRFRLMTGAIPQIVLITNDAGVLEFINDQWHQYTG--EALHEGLASLDTMIVRHI 199 L ESE RFR M P ++ +T G +++N +W+ +TG EA GL L+ + Sbjct: 299 LAESEARFRTMADDAPVMMWVTGPDGACQYLNRRWYDFTGQNEAQALGLGWLEA-----V 353 Query: 200 HPEDRADTMAAWQHARSACMEVAIEHRIADARGQYRWFLTRGKPQLEAGSGRILHWYGTS 259 HP+DR + + A + ++E+R+ G YRW + P+ A G L + G+ Sbjct: 354 HPDDRGWSGDTFLRANARHEGFSLEYRLRRRDGVYRWAIDTASPRF-AADGSFLGYIGSV 412 Query: 260 TDIHVQKEAIAELACLTRESERRRRFYESFLSTTPDLAYAWDLNHR---FTYANRVLLQM 316 DI ++ A LA ESE R R L+ WD + R + R+ M Sbjct: 413 VDIEERRAAELALA----ESEERLR-----LAVESGEIGLWDFDPRAGTLFWPPRIK-AM 462 Query: 317 WGKTWDEAIGKNCLELGYEPWHAEMHSREI-------------EQVRATKRPVRGDVPFN 363 +G D + + G P + E+ RA R G V + Sbjct: 463 FGLAPDADVTLDDFADGLHPDDRARVTAAFAAALDPVARAFYDEEFRAIGR-ADGTVRWV 521 Query: 364 GTFGRRIYDYIIFPVLGPDGEVEAVAGTTRDVTERKNSEARQHALFRLAEAIRSAGSLGD 423 GR ++D +G G+ D+T RK +E R L EA R ++ D Sbjct: 522 AAKGRGVFD--------AEGRCLRGVGSAIDITARKATEER------LVEATRRLDAVLD 567 Query: 424 IASAAAQIIGDALTARWVSYKSLGPAQQVEELGQWSFHQDDSAVAVLALHDERRVAQTVR 483 A+ A ++ + +++ + E L +S + ALHD V T Sbjct: 568 NATQAIFMMDERQHCAYMN-------RAAERLTGYSLDETHGK----ALHDV--VHHTRP 614 Query: 484 SGSVMLVADVGTDARTAALRQEHLACGVASYMDVPLLDHEKLVGIVHVSSNLPRTWTDNE 543 GS + + D QE + + + S P +T + Sbjct: 615 DGSPYPLHECPIDQAFPENNQEQ----------------GQEIFVHRDGSFYPVAFTASP 658 Query: 544 LAIVREVSEQTRAAFERIRNQQALAASEARLREINESLEAEVSARTRELMATEEALRHSQ 603 +R+ RN + ++A+L N SLE +V+ART ELM TEEALR SQ Sbjct: 659 ---IRDEGGMPIGTVIEARNIEGELRAKAQLEAFNASLEQQVAARTAELMRTEEALRQSQ 715 Query: 604 KIEAIGQLTGGLAHDFNNLLGGITGSLDLMRVRLVQGRGDELFRYIDLAARSAQRAASLT 663 K+EA+GQLTGGLAHDFNNLL GITGSL+L++ RL QGR E+ RY++ A +A+RAA+LT Sbjct: 716 KMEAVGQLTGGLAHDFNNLLTGITGSLELLQTRLAQGRITEIDRYVNAAQGAAKRAAALT 775 Query: 664 QRLLAFARRQTLDPRPTNVNALIGGMEELIRRTIGPAITLEVVTAVSLWPTFVDGPQLES 723 RLLAF+RRQTLDP+PT+VN L+ GME+L+RRTIGP+ITLEVV A LW VD QLE+ Sbjct: 776 HRLLAFSRRQTLDPKPTDVNRLVMGMEDLLRRTIGPSITLEVVAAGGLWSVLVDPSQLEN 835 Query: 724 ALLNLCINARDAMPDGGRLTIETANKWLDDKWAQERDLPAGQYVCVSVTDNGSGMPPDVL 783 ALLNLCINARDAMPDGGR+TIETANKWLDD+ A+ERDL GQY+ + VTD+G+GM PDV+ Sbjct: 836 ALLNLCINARDAMPDGGRITIETANKWLDDRGAKERDLDPGQYLSLCVTDSGTGMSPDVI 895 Query: 784 ARAFDPFFTTKPIGEGTGLGLSMVYGFARQSGGQVRLYSELGQGSAVSLYLPRHQHAAQA 843 A+AFDPFFTTKPIG+GTGLGLSM+YGF RQSGGQVR+YSE+GQG+ + LYLPRH AA+ Sbjct: 896 AKAFDPFFTTKPIGQGTGLGLSMIYGFVRQSGGQVRIYSEVGQGTTMCLYLPRHYGAAEE 955 Query: 844 EECEP--AHLPSAAGRGEVVLVVDDEAPIRLLVAEVLNEAGYVTLQAEDGPSALRILHSA 901 E P A P A +GE VL+VDDE +R+LV EVL + GY ++A DGP+ L++L S Sbjct: 956 PEAAPDLAAAPRAE-QGETVLIVDDEPTVRMLVTEVLEDLGYTAIEAADGPAGLKVLQSD 1014 Query: 902 ARIDLLITDVGLPGGLNGRQVADAARAARPGLQVLFITGYAENAAVGNGHLPAGMQLMTK 961 R+DLL+TDVGLPGG+NGRQVADA R RP L+VLFITGYAENAAVGNGHL GMQ++TK Sbjct: 1015 VRLDLLVTDVGLPGGMNGRQVADAGRVLRPDLKVLFITGYAENAAVGNGHLEPGMQVITK 1074 Query: 962 PFKMDLLARRVQDILESR 979 PF M++LA R+++++ SR Sbjct: 1075 PFVMEVLAARIKEMINSR 1092 >ref|YP_002965559.1| sensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains [methylobacterium extorquens AM1] gb|ACS42282.1| putative sensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains [Methylobacterium extorquens AM1] Length = 1086 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 377/858 (43%), Positives = 502/858 (58%), Gaps = 84/858 (9%) Query: 142 LHESETRFRLMTGAIPQIVLITNDAGVLEFINDQWHQYTG--EALHEGLASLDTMIVRHI 199 L ESE RFR M P ++ +T G +++N +W+ +TG EA GL L+ + Sbjct: 293 LAESEARFRTMADDAPVMMWVTGPDGACQYLNRRWYDFTGQNEAQALGLGWLEA-----V 347 Query: 200 HPEDRADTMAAWQHARSACMEVAIEHRIADARGQYRWFLTRGKPQLEAGSGRILHWYGTS 259 HP+DR + + A + ++E+R+ G YRW + P+ A G L + G+ Sbjct: 348 HPDDRGWSGDTFLRANARHEGFSLEYRLRRRDGVYRWAIDTASPRF-AADGSFLGYIGSV 406 Query: 260 TDIHVQKEAIAELACLTRESERRRRFYESFLSTTPDLAYAWDLNHR---FTYANRVLLQM 316 DI ++ A LA ESE R R L+ WD + R + R+ M Sbjct: 407 VDIEERRAAELALA----ESEERLR-----LAVESGEIGLWDFDPRAGTLFWPPRIK-AM 456 Query: 317 WGKTWDEAIGKNCLELGYEPWHAEMHSREI-------------EQVRATKRPVRGDVPFN 363 +G D + + G P + E+ RA R G V + Sbjct: 457 FGLAPDADVTLDDFADGLHPDDRARVTAAFAAALDPVARAFYDEEFRAIGR-ADGTVRWV 515 Query: 364 GTFGRRIYDYIIFPVLGPDGEVEAVAGTTRDVTERKNSEARQHALFRLAEAIRSAGSLGD 423 GR ++D +G G+ D+T RK +E R L EA R ++ D Sbjct: 516 AAKGRGVFD--------AEGRCLRGVGSAIDITARKATEER------LVEATRRLDAVLD 561 Query: 424 IASAAAQIIGDALTARWVSYKSLGPAQQVEELGQWSFHQDDSAVAVLALHDERRVAQTVR 483 A+ A ++ + +++ + E L +S + ALHD V T Sbjct: 562 NATQAIFMMDERQHCAYMN-------RAAERLTGYSLDETHGK----ALHDV--VHHTRP 608 Query: 484 SGSVMLVADVGTDARTAALRQEHLACGVASYMDVPLLDHEKLVGIVHVSSNLPRTWTDNE 543 GS + + D QE + + + S P +T + Sbjct: 609 DGSPYPLHECPIDQAFPENNQEQ----------------GQEIFVHRDGSFYPVAFTASP 652 Query: 544 LAIVREVSEQTRAAFERIRNQQALAASEARLREINESLEAEVSARTRELMATEEALRHSQ 603 +R+ RN + ++A+L N SLE +V ART ELM TEEALR SQ Sbjct: 653 ---IRDEGGTPIGTVIEARNIEGELRAKAQLEAFNASLEQQVLARTAELMRTEEALRQSQ 709 Query: 604 KIEAIGQLTGGLAHDFNNLLGGITGSLDLMRVRLVQGRGDELFRYIDLAARSAQRAASLT 663 K+EA+GQLTGGLAHDFNNLL GITGSL+L++ RL QGR E+ RY++ A +A+RAA+LT Sbjct: 710 KMEAVGQLTGGLAHDFNNLLTGITGSLELLQTRLAQGRITEIDRYVNAAQGAAKRAAALT 769 Query: 664 QRLLAFARRQTLDPRPTNVNALIGGMEELIRRTIGPAITLEVVTAVSLWPTFVDGPQLES 723 RLLAF+RRQTLDP+PT+VN L+ GME+L+RRTIGP+ITLEVV A LW VD QLE+ Sbjct: 770 HRLLAFSRRQTLDPKPTDVNRLVMGMEDLLRRTIGPSITLEVVAAGGLWSVLVDPSQLEN 829 Query: 724 ALLNLCINARDAMPDGGRLTIETANKWLDDKWAQERDLPAGQYVCVSVTDNGSGMPPDVL 783 ALLNLCINARDAMPDGGR+TIETANKWLDD+ A+ERDL GQY+ + VTD+G+GM PDV+ Sbjct: 830 ALLNLCINARDAMPDGGRITIETANKWLDDRGAKERDLDPGQYLSLCVTDSGTGMSPDVI 889 Query: 784 ARAFDPFFTTKPIGEGTGLGLSMVYGFARQSGGQVRLYSELGQGSAVSLYLPRHQHAAQA 843 A+AFDPFFTTKPIG+GTGLGLSM+YGF RQSGGQVR+YSE+GQG+ + LYLPRH AA+ Sbjct: 890 AKAFDPFFTTKPIGQGTGLGLSMIYGFVRQSGGQVRIYSEVGQGTTMCLYLPRHYGAAEE 949 Query: 844 EECEP--AHLPSAAGRGEVVLVVDDEAPIRLLVAEVLNEAGYVTLQAEDGPSALRILHSA 901 E P A P A +GE VL+VDDE +R+LV EVL + GY ++A DGP+ L++L S Sbjct: 950 PEAAPDLAAAPRAE-QGETVLIVDDEPTVRMLVTEVLEDLGYTAIEAADGPAGLKVLQSD 1008 Query: 902 ARIDLLITDVGLPGGLNGRQVADAARAARPGLQVLFITGYAENAAVGNGHLPAGMQLMTK 961 R+DLL+TDVGLPGG+NGRQVADA R RP L+VLFITGYAENAAVGNGHL GMQ++TK Sbjct: 1009 VRLDLLVTDVGLPGGMNGRQVADAGRVLRPDLKVLFITGYAENAAVGNGHLEPGMQVITK 1068 Query: 962 PFKMDLLARRVQDILESR 979 PF M++LA R+++++ SR Sbjct: 1069 PFVMEVLAARIKEMINSR 1086