BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0483.p         (183 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754123.1| ATPases of the AAA+ class [Collimonas fungiv...   118   3e-25
ref|YP_001020371.1| hypothetical protein Mpe_A1175 [Methylibium ...   111   4e-23
ref|ZP_04945080.1| hypothetical protein BDAG_00959 [Burkholderia...   107   8e-22
ref|YP_004022081.1| hypothetical protein RBRH_00480 [Burkholderi...   107   1e-21
ref|ZP_08275892.1| ATPases of the AAA+ class [Oxalobacteraceae b...   105   2e-21

>ref|YP_004754123.1| ATPases of the AAA+ class [Collimonas fungivorans Ter331]
 gb|AEK63300.1| ATPases of the AAA+ class [Collimonas fungivorans Ter331]
          Length = 135

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/125 (47%), Positives = 80/125 (64%)

Query: 59  SLLMLALQAAPVRADEPTLSILEPKTGQTVTSPFRVRLAAHSMTTRPAGKVVEGTGHHHL 118
           S  +L+    P  A   ++S +EP  G  V+SPF V+     M  +PAG +   TGHHHL
Sbjct: 11  SATLLSASLLPQLAHAASVSFIEPADGAVVSSPFTVKFGVSGMEVKPAGDMTANTGHHHL 70

Query: 119 LINHGAVGKGEVIPHDETHIHLDDGQTETMVSLPPGKYKLTAQFADGEHRSYGHMMAHGI 178
           LIN  ++  G+ IP D+ H+H   GQTET V+LPPG+YKLT QFA+G H+SYG  ++  I
Sbjct: 71  LINEDSIPAGQSIPIDDKHLHFGKGQTETSVTLPPGEYKLTMQFANGAHQSYGPELSKTI 130

Query: 179 NITVK 183
           N+TVK
Sbjct: 131 NVTVK 135


>ref|YP_001020371.1| hypothetical protein Mpe_A1175 [Methylibium petroleiphilum PM1]
 gb|ABM94136.1| hypothetical protein Mpe_A1175 [Methylibium petroleiphilum PM1]
          Length = 142

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 55/104 (52%), Positives = 70/104 (67%)

Query: 80  LEPKTGQTVTSPFRVRLAAHSMTTRPAGKVVEGTGHHHLLINHGAVGKGEVIPHDETHIH 139
           +EP  G TV+SP +V+     MT RPAG++ EGTGHHHLLI+    G+G VIP D +H+H
Sbjct: 39  IEPVDGSTVSSPVKVKFGLKGMTVRPAGELAEGTGHHHLLIDTAGPGQGNVIPADGSHLH 98

Query: 140 LDDGQTETMVSLPPGKYKLTAQFADGEHRSYGHMMAHGINITVK 183
              GQTET V L PG + L  QFADG H+SYG  M+  + ITV+
Sbjct: 99  FGKGQTETEVQLAPGSHVLKMQFADGLHQSYGEAMSASVRITVR 142


>ref|ZP_04945080.1| hypothetical protein BDAG_00959 [Burkholderia dolosa AUO158]
 gb|EAY68251.1| hypothetical protein BDAG_00959 [Burkholderia dolosa AUO158]
          Length = 194

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 62/145 (42%), Positives = 83/145 (57%), Gaps = 7/145 (4%)

Query: 39  QEPTMLNPVFRRTLLTATCGSLLMLALQAAPVRADEPTLSILEPKTGQTVTSPFRVRLAA 98
           +E TMLN   R+ +  A C    ++AL  +     E  +  +EP+ G TV+SP  V+   
Sbjct: 57  EEQTMLN---RKWIAGAVC----VVALAVSTAARAEARVFFVEPQDGATVSSPVHVKFGL 109

Query: 99  HSMTTRPAGKVVEGTGHHHLLINHGAVGKGEVIPHDETHIHLDDGQTETMVSLPPGKYKL 158
             M  +PAG +   TGHHHLLI+   V KG+VIP  +  +H   GQTET V LPPG++ L
Sbjct: 110 EGMALKPAGDMTPDTGHHHLLIDGKPVPKGDVIPATDHSLHFGKGQTETDVKLPPGQHTL 169

Query: 159 TAQFADGEHRSYGHMMAHGINITVK 183
           T Q  DG HRSYG  ++  I I VK
Sbjct: 170 TLQLGDGAHRSYGPELSSTITINVK 194


>ref|YP_004022081.1| hypothetical protein RBRH_00480 [Burkholderia rhizoxinica HKI 454]
 emb|CBW76562.1| Hypothetical protein RBRH_00480 [Burkholderia rhizoxinica HKI 454]
          Length = 182

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 65/150 (43%), Positives = 89/150 (59%), Gaps = 3/150 (2%)

Query: 34  LLSSHQEPTMLNPVFRRTLLTATCGSLLMLALQAAPVRADEPTLSILEPKTGQTVTSPFR 93
           L+S H+E  ++   F ++L   T    L+ AL A  V A    +S +EPK G  V++P  
Sbjct: 36  LVSCHEEQFVMICAFAKSLCRTTT---LLSALFAGCVTAHAADVSFVEPKDGAQVSNPIH 92

Query: 94  VRLAAHSMTTRPAGKVVEGTGHHHLLINHGAVGKGEVIPHDETHIHLDDGQTETMVSLPP 153
           ++ A   M   PAG +  GTGHHHLL++  A+  GEV+P ++  IH   GQTET V+L P
Sbjct: 93  LKFAVDGMKVAPAGDMTPGTGHHHLLVDGQALPSGEVVPVNDHSIHYGKGQTETDVTLTP 152

Query: 154 GKYKLTAQFADGEHRSYGHMMAHGINITVK 183
           G + LT QFADG HRSYG  M+  I + VK
Sbjct: 153 GDHTLTMQFADGAHRSYGPEMSQTIKVHVK 182


>ref|ZP_08275892.1| ATPases of the AAA+ class [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30637.1| ATPases of the AAA+ class [Oxalobacteraceae bacterium IMCC9480]
          Length = 129

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/107 (50%), Positives = 71/107 (66%)

Query: 77  LSILEPKTGQTVTSPFRVRLAAHSMTTRPAGKVVEGTGHHHLLINHGAVGKGEVIPHDET 136
           +S +EP  G TV + F V+ A   M  +PAG++   +GHHHLLIN  A+  GE +P DET
Sbjct: 23  VSFVEPADGATVPTTFPVKFAVEGMDVKPAGELSPTSGHHHLLINATAIPTGEPVPFDET 82

Query: 137 HIHLDDGQTETMVSLPPGKYKLTAQFADGEHRSYGHMMAHGINITVK 183
           HIH   GQTE  V+L PGKY+LT QFA+G H+SYG  ++  I + VK
Sbjct: 83  HIHFGKGQTEATVTLKPGKYQLTLQFANGAHQSYGAPLSKTITVNVK 129