BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0468.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03266055.1| conserved hypothetical protein [Burkholderia ... 138 1e-30 ref|ZP_06841053.1| conserved hypothetical protein [Burkholderia ... 133 3e-29 ref|YP_559770.1| hypothetical protein Bxe_A1235 [Burkholderia xe... 132 4e-29 ref|YP_001778555.1| hypothetical protein Bcenmc03_4935 [Burkhold... 130 2e-28 ref|YP_371075.1| hypothetical protein Bcep18194_B0315 [Burkholde... 129 6e-28 >ref|ZP_03266055.1| conserved hypothetical protein [Burkholderia sp. H160] gb|EEA02357.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 244 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 5/223 (2%) Query: 60 AQTADAPSLQEGDAWVYQATEEQNTAGILGSTTKKWDVAIVRSGSKTMVISAKAEDSNLP 119 AQ+A AP +Q GD W Y +T E+ G G V ++R S + + +K S Sbjct: 21 AQSAPAPDVQPGDTWTYTSTVEK---GPSGWNQTHEQVTVMRRTSSHIYVESKIAGSTQA 77 Query: 120 PKELLRNADWAVVQNINGKNTVTNRPYDFPLKPGKTWKVEYDTANPDARTKVQHITKNYT 179 P+EL+ ADW+ +++NG +TV NRP+ FPL GK+W V+Y +P+ Q + Y Sbjct: 78 PRELISGADWSRERSVNGTDTVVNRPFAFPLSTGKSWNVDYTEQHPNRMFASQKWSSQYR 137 Query: 180 VLGWVDIKVPAGTYHAIKVEMEGEWSKEFNPTAAVATSTVTSTQAGSVAISASRNASTQQ 239 V+G +++ AG + AIK+E EG+W + P V +T ++ A + Q Sbjct: 138 VVGTETVELAAGKFQAIKIESEGDWLAQLEPRQTVTQATQVEHDDTAMITHAQKIGPVQM 197 Query: 240 SASGRMYDAFWYVPELKTHVKLITENYQAGGALNKRVTEELAA 282 +GR Y AFWYVPE+ VK + E Y + G N+R T EL + Sbjct: 198 --TGRTYKAFWYVPEVGRWVKSVEEYYSSNGVRNERYTTELES 238 >ref|ZP_06841053.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG71343.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 244 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 5/223 (2%) Query: 60 AQTADAPSLQEGDAWVYQATEEQNTAGILGSTTKKWDVAIVRSGSKTMVISAKAEDSNLP 119 AQ+A P+L+ GD W Y T E+ + T +V+++R+ S + ++K S Sbjct: 21 AQSAPPPALKTGDTWTYVNTFEK-APSVWRQTHD--EVSVLRATSAHIYYASKPVGSTQA 77 Query: 120 PKELLRNADWAVVQNINGKNTVTNRPYDFPLKPGKTWKVEYDTANPDARTKVQHITKNYT 179 P EL+ ADW+ +++NG V NRP FPL PGKTW ++Y +P+ + + Y Sbjct: 78 PNELIAGADWSRERSVNGTEVVVNRPLAFPLSPGKTWNIDYAEQHPNKMHASEKWSTQYR 137 Query: 180 VLGWVDIKVPAGTYHAIKVEMEGEWSKEFNPTAAVATSTVTSTQAGSVAISASRNASTQQ 239 V+ ++VPAG + AIKVE EG W+ + PT V + Q G A+ + Sbjct: 138 VVDTETVEVPAGKFQAIKVEAEGNWTAQLEPTQTV--TQAVQVQQGDTAMVTHAQKTGPV 195 Query: 240 SASGRMYDAFWYVPELKTHVKLITENYQAGGALNKRVTEELAA 282 A+GR Y A WYVPE+ VK + E Y + G N+R T EL + Sbjct: 196 QATGRTYKAIWYVPEIGRWVKSVEEYYASNGVRNERYTSELES 238 >ref|YP_559770.1| hypothetical protein Bxe_A1235 [Burkholderia xenovorans LB400] gb|ABE31718.1| hypothetical protein Bxe_A1235 [Burkholderia xenovorans LB400] Length = 244 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 5/223 (2%) Query: 60 AQTADAPSLQEGDAWVYQATEEQNTAGILGSTTKKWDVAIVRSGSKTMVISAKAEDSNLP 119 AQ+A P+L+ GD W Y T E+ + T +V+++R+ S + ++K S Sbjct: 21 AQSAPPPALKAGDTWTYVDTFEK-APSVWRQTHD--EVSVLRATSAHVYYASKPVGSTQA 77 Query: 120 PKELLRNADWAVVQNINGKNTVTNRPYDFPLKPGKTWKVEYDTANPDARTKVQHITKNYT 179 P EL+ ADW+ +++NG V NRP FPL PGKTW ++Y +P+ + + Y Sbjct: 78 PNELIAGADWSRERSVNGTEMVVNRPLAFPLSPGKTWSIDYTEQHPNKMHASEKWSTQYR 137 Query: 180 VLGWVDIKVPAGTYHAIKVEMEGEWSKEFNPTAAVATSTVTSTQAGSVAISASRNASTQQ 239 V+ ++VPAG + AIKVE EG W+ + PT V + Q G A+ + Sbjct: 138 VVDTETVEVPAGKFQAIKVEAEGNWTAQLEPTQTV--TQAVQVQQGDTAMITHAQKTGPV 195 Query: 240 SASGRMYDAFWYVPELKTHVKLITENYQAGGALNKRVTEELAA 282 A+GR Y A WYVPE+ VK + E Y + G N+R T EL + Sbjct: 196 QATGRTYKAIWYVPEIGRWVKSVEEYYASNGVRNERYTSELES 238 >ref|YP_001778555.1| hypothetical protein Bcenmc03_4935 [Burkholderia cenocepacia MC0-3] gb|ACA94065.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 269 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 8/234 (3%) Query: 52 LLCASA---SYAQTADAPSLQEGDAWVYQATEEQNTAGILGSTTKKWDVAIVRSGSKTMV 108 LLCA A + AQ+ AP+L+ GD W Y T E G G + ++ + R+ + Sbjct: 10 LLCAVAPGIALAQSIAAPALKPGDTWTYVDTVE---IGPNGWRQTRDEITVQRTTPGHIY 66 Query: 109 ISAKAEDSNLPPKELLRNADWAVVQNINGKNTVTNRPYDFPLKPGKTWKVEYDTANPDAR 168 + ++ + P E++ +ADW+ ++ING TV NRP FPL GKTW ++Y ++P+ + Sbjct: 67 VESRQSGATQAPHEMIVDADWSRARSINGTETVVNRPLAFPLTIGKTWTIQYSESHPNPQ 126 Query: 169 TKVQHITKNYTVLGWVDIKVPAGTYHAIKVEMEGEWSKEFNPTAAVATSTVTSTQAGSVA 228 + +Y V+G + V G + AIK+E EG W + P ++ TS V+ GS Sbjct: 127 HASEAYDTHYKVVGHETVTVTGGKFDAIKIEAEGSWKAQSAPGQSI-TSGVSRNAGGSTI 185 Query: 229 ISASRNASTQQSASGRMYDAFWYVPELKTHVKLITENYQAGGALNKRVTEELAA 282 + SRN T + +G+ Y AFWYVP + VK + E Y G R ++ELA+ Sbjct: 186 VVQSRNNGTAE-GTGKTYKAFWYVPAVGRWVKSVEEYYDTNGMRTARYSDELAS 238 >ref|YP_371075.1| hypothetical protein Bcep18194_B0315 [Burkholderia sp. 383] gb|ABB10431.1| hypothetical protein Bcep18194_B0315 [Burkholderia sp. 383] Length = 273 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 122/225 (54%), Gaps = 5/225 (2%) Query: 58 SYAQTADAPSLQEGDAWVYQATEEQNTAGILGSTTKKWDVAIVRSGSKTMVISAKAEDSN 117 + AQ+ P+L+ GD W Y T E G G + +++ R+ S+ + + + + Sbjct: 19 ALAQSIAPPALKPGDTWTYINTVE---IGPNGWRQTRDQISVQRTTSEHIYVETQQSGTT 75 Query: 118 LPPKELLRNADWAVVQNINGKNTVTNRPYDFPLKPGKTWKVEYDTANPDARTKVQHITKN 177 P+EL+ +ADW+ +++NG TV NRP FPL GKTW V+Y ++P+A+ + + Sbjct: 76 QAPRELIVDADWSRSRSVNGTETVVNRPLAFPLTAGKTWTVKYSESHPNAQHASEAYDTH 135 Query: 178 YTVLGWVDIKVPAGTYHAIKVEMEGEWSKEFNPTAAVATSTVTSTQAGSVAISASRNAST 237 Y V+G + V G + AIK+E EG W + P ++ TS V+ GS + SRN T Sbjct: 136 YKVVGPDTVTVAGGKFDAIKIEAEGTWKAQPAPGQSI-TSGVSRNAGGSTIVMQSRNNGT 194 Query: 238 QQSASGRMYDAFWYVPELKTHVKLITENYQAGGALNKRVTEELAA 282 + +G+ Y AFWYVP + VK + E Y A G N R + EL + Sbjct: 195 AEQ-TGKTYKAFWYVPAVGRWVKSVEEYYDANGTRNARYSNELVS 238