BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0460.p (284 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774026.1| sulfate ABC transporter permease [Herbaspiri... 385 e-105 ref|YP_004754419.1| MolT family ABC transporter permease [Collim... 336 2e-90 ref|YP_841116.1| ABC transporter permease [Ralstonia eutropha H1... 288 8e-76 ref|NP_946825.1| putative permease [Rhodopseudomonas palustris C... 283 3e-74 ref|YP_001990667.1| ABC transporter inner membrane protein [Rhod... 282 4e-74 >ref|YP_003774026.1| sulfate ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ62118.1| ABC-type sulfate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 291 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 244/272 (89%), Positives = 255/272 (93%), Gaps = 1/272 (0%) Query: 14 KRPGRKVWM-FAVPGMTLFAAFWLLPMLRLVGVGASGPTGAMAYLAVLTNRHYLWSLVST 72 +R G +VW+ FAVPG+TLF AFWLLPM RLVGVGASGP GAMAYL+VLTNRHY SLVST Sbjct: 20 RRAGNQVWLCFAVPGLTLFCAFWLLPMARLVGVGASGPDGAMAYLSVLTNRHYFASLVST 79 Query: 73 LLLSGAVTVATLVISSLVGLFLQRNRFPGKPLLLAMLTFPLAFPGVVVGFMVIMLAGRQG 132 L LS AVT ATL IS VGLFLQR+RFPG+ LLLAMLTFPLAFPGVVVGFMVIMLAGRQG Sbjct: 80 LALSAAVTAATLAISVFVGLFLQRHRFPGQALLLAMLTFPLAFPGVVVGFMVIMLAGRQG 139 Query: 133 LIGAFTNWLFGESLVFAYSLAGLFLGYLYFSIPRVILTVVAAAEKLDPSLEEAARSLGAK 192 LIGA TN LFGESLVFAYSLAGLFLGYLYFSIPRVILTVVAAAEKLDPSLEEAARSLGA+ Sbjct: 140 LIGALTNGLFGESLVFAYSLAGLFLGYLYFSIPRVILTVVAAAEKLDPSLEEAARSLGAR 199 Query: 193 PWQVLLHVVLPALLPALISSGAICFATSVGAFGTAFTLAANIDVLPMTIYNEFTGYANFA 252 PWQVLLHVVLPALLPAL+SSGAICFATSVGAFGTAFTLAANIDVLPMTIYNEFTGYANFA Sbjct: 200 PWQVLLHVVLPALLPALVSSGAICFATSVGAFGTAFTLAANIDVLPMTIYNEFTGYANFA 259 Query: 253 TAASLSIVLGLITWAMLALARSLTGSGVAAAA 284 TAASLSIVLG+ITWA+LALARSLTGSGVAAAA Sbjct: 260 TAASLSIVLGVITWAVLALARSLTGSGVAAAA 291 >ref|YP_004754419.1| MolT family ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK63596.1| ABC-type transporter, permease component: MolT family [Collimonas fungivorans Ter331] Length = 281 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 220/281 (78%), Positives = 242/281 (86%), Gaps = 1/281 (0%) Query: 5 LSQSRQLHRKRPGRKVWM-FAVPGMTLFAAFWLLPMLRLVGVGASGPTGAMAYLAVLTNR 63 + +S Q R GR V++ FA PG+TLF AFWLLPMLRLV VGASGP+GA AYLAVLTNR Sbjct: 1 MKRSSQKRRTPAGRHVYLLFAAPGVTLFLAFWLLPMLRLVEVGASGPSGAAAYLAVLTNR 60 Query: 64 HYLWSLVSTLLLSGAVTVATLVISSLVGLFLQRNRFPGKPLLLAMLTFPLAFPGVVVGFM 123 HY SL+ TLLLS AVT+ATL+ISSLVGLFLQRNRF GK +LLAMLTFPLAFPGVVVGFM Sbjct: 61 HYFTSLMLTLLLSAAVTLATLMISSLVGLFLQRNRFAGKAVLLAMLTFPLAFPGVVVGFM 120 Query: 124 VIMLAGRQGLIGAFTNWLFGESLVFAYSLAGLFLGYLYFSIPRVILTVVAAAEKLDPSLE 183 VIMLAGRQGLIGA TNWLFG++ VFAYSL GLFLGYLYFSIPRVILTV+AAAEKLDP+LE Sbjct: 121 VIMLAGRQGLIGAVTNWLFGDAWVFAYSLGGLFLGYLYFSIPRVILTVMAAAEKLDPALE 180 Query: 184 EAARSLGAKPWQVLLHVVLPALLPALISSGAICFATSVGAFGTAFTLAANIDVLPMTIYN 243 EAARSLGA P +V +VLPAL PAL+SSGAICFATSVGAFGTAFTLA NIDVLPM IYN Sbjct: 181 EAARSLGANPLRVFADIVLPALAPALVSSGAICFATSVGAFGTAFTLATNIDVLPMAIYN 240 Query: 244 EFTGYANFATAASLSIVLGLITWAMLALARSLTGSGVAAAA 284 EFT YANF+ AA+LSIVLG TW +LALARS +G+ AAA Sbjct: 241 EFTSYANFSMAAALSIVLGATTWLVLALARSWSGNAAGAAA 281 >ref|YP_841116.1| ABC transporter permease [Ralstonia eutropha H16] emb|CAJ96386.1| ABC-type transporter, permease component: MolT family [Ralstonia eutropha H16] Length = 299 Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 174/265 (65%), Positives = 211/265 (79%) Query: 20 VWMFAVPGMTLFAAFWLLPMLRLVGVGASGPTGAMAYLAVLTNRHYLWSLVSTLLLSGAV 79 +++FA+P + +F AF+ LPM RLV V +G GA Y V+++ YL SL+ T+LLS AV Sbjct: 35 LFLFALPALVVFLAFFCLPMARLVAVSINGEQGAGVYWTVVSSPRYLHSLMVTVLLSAAV 94 Query: 80 TVATLVISSLVGLFLQRNRFPGKPLLLAMLTFPLAFPGVVVGFMVIMLAGRQGLIGAFTN 139 T+ TLVI+ + G FLQRN PGK +L+AMLTFPLAFPGVV+GFMVIML GR GL+ + Sbjct: 95 TLVTLVIAGIAGTFLQRNAVPGKSVLVAMLTFPLAFPGVVIGFMVIMLGGRNGLLAMVGD 154 Query: 140 WLFGESLVFAYSLAGLFLGYLYFSIPRVILTVVAAAEKLDPSLEEAARSLGAKPWQVLLH 199 L GE FAY LAGLF+GYLYFSIPRVILTV+AA EKLD SLEEAARSLGA PW+V+ Sbjct: 155 KLAGERWTFAYGLAGLFVGYLYFSIPRVILTVMAAVEKLDASLEEAARSLGAGPWRVVRD 214 Query: 200 VVLPALLPALISSGAICFATSVGAFGTAFTLAANIDVLPMTIYNEFTGYANFATAASLSI 259 V+LPA++PA+ISSGAICFATS+GAFGTAFTLA +DVLP+TIYNEFT YANF AA+LSI Sbjct: 215 VMLPAMMPAMISSGAICFATSMGAFGTAFTLATQLDVLPLTIYNEFTNYANFGMAAALSI 274 Query: 260 VLGLITWAMLALARSLTGSGVAAAA 284 +LG +TWA+LALAR +G VAA A Sbjct: 275 LLGTVTWALLALARWFSGDAVAATA 299 >ref|NP_946825.1| putative permease [Rhodopseudomonas palustris CGA009] emb|CAE26919.1| putative permease protein [Rhodopseudomonas palustris CGA009] Length = 271 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 175/259 (67%), Positives = 211/259 (81%) Query: 26 PGMTLFAAFWLLPMLRLVGVGASGPTGAMAYLAVLTNRHYLWSLVSTLLLSGAVTVATLV 85 P + L AF+LLPM RLV +GA GP G YLA+L Y +L++TLLL+ A T+ATL+ Sbjct: 13 PLVVLTVAFFLLPMARLVVIGAEGPEGPAGYLAILLEPRYRATLINTLLLATATTIATLI 72 Query: 86 ISSLVGLFLQRNRFPGKPLLLAMLTFPLAFPGVVVGFMVIMLAGRQGLIGAFTNWLFGES 145 ++++ GLFLQR+RFPG+ +L+AMLTFPLAFPGVV+GF++I+LAGRQG+IG T + G Sbjct: 73 VATIAGLFLQRHRFPGRAVLIAMLTFPLAFPGVVIGFLIILLAGRQGVIGDLTRFATGTR 132 Query: 146 LVFAYSLAGLFLGYLYFSIPRVILTVVAAAEKLDPSLEEAARSLGAKPWQVLLHVVLPAL 205 +VFAYS+ GLFLGYLYFSIPRVILT++AA +KLDP LEEAARSLGA PW V VVLPAL Sbjct: 133 VVFAYSIWGLFLGYLYFSIPRVILTIMAAVQKLDPGLEEAARSLGASPWAVQRDVVLPAL 192 Query: 206 LPALISSGAICFATSVGAFGTAFTLAANIDVLPMTIYNEFTGYANFATAASLSIVLGLIT 265 +PA ++SGAI FAT++GAFGTAFTLA NIDVLPM IY EFT ANFATAASLS+ LGLI+ Sbjct: 193 VPAFVASGAIAFATAMGAFGTAFTLATNIDVLPMLIYTEFTLAANFATAASLSVGLGLIS 252 Query: 266 WAMLALARSLTGSGVAAAA 284 WAMLALARSLTG VAA Sbjct: 253 WAMLALARSLTGGTVAATG 271 >ref|YP_001990667.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] gb|ACF00192.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 271 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 174/259 (67%), Positives = 211/259 (81%) Query: 26 PGMTLFAAFWLLPMLRLVGVGASGPTGAMAYLAVLTNRHYLWSLVSTLLLSGAVTVATLV 85 P + L AF+LLPM RLV +GA GP G YLA+L Y +L++T+LL+ A T+ATL+ Sbjct: 13 PLVVLTVAFFLLPMARLVVIGAEGPEGPAGYLAILLEPRYRATLINTVLLAAATTIATLI 72 Query: 86 ISSLVGLFLQRNRFPGKPLLLAMLTFPLAFPGVVVGFMVIMLAGRQGLIGAFTNWLFGES 145 ++++ GLFLQR+RFPG+ +L+AMLTFPLAFPGVV+GF++I+LAGRQG+IG T + G Sbjct: 73 VATIAGLFLQRHRFPGRAVLIAMLTFPLAFPGVVIGFLIILLAGRQGVIGDLTRFATGTR 132 Query: 146 LVFAYSLAGLFLGYLYFSIPRVILTVVAAAEKLDPSLEEAARSLGAKPWQVLLHVVLPAL 205 +VFAYS+ GLFLGYLYFSIPRVILT++AA +KLDP LEEAARSLGA PW V VVLPAL Sbjct: 133 VVFAYSIWGLFLGYLYFSIPRVILTIMAAVQKLDPGLEEAARSLGASPWAVQRDVVLPAL 192 Query: 206 LPALISSGAICFATSVGAFGTAFTLAANIDVLPMTIYNEFTGYANFATAASLSIVLGLIT 265 +PA ++SGAI FAT++GAFGTAFTLA NIDVLPM IY EFT ANFATAASLS+ LGLI+ Sbjct: 193 VPAFVASGAIAFATAMGAFGTAFTLATNIDVLPMLIYTEFTLAANFATAASLSVGLGLIS 252 Query: 266 WAMLALARSLTGSGVAAAA 284 WAMLALARSLTG VAA Sbjct: 253 WAMLALARSLTGGTVAATG 271