BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0459.p (335 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774025.1| Fe3+ ABC transporter periplasmic protein [He... 595 e-168 ref|YP_004754420.1| putative periplasmic solute-binding protein ... 536 e-150 ref|YP_002005452.1| ABC transporter substrate-binding protein [C... 501 e-140 ref|YP_586971.1| ABC transporter, periplasmic binding component ... 499 e-139 ref|YP_841115.1| ABC-type transporter, periplasmic component [Ra... 498 e-139 >ref|YP_003774025.1| Fe3+ ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62117.1| ABC-type Fe3+ transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 335 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 318/335 (94%), Positives = 329/335 (98%) Query: 1 MFLKRVIQTAAGALLLSASLAASAQTAICYNCPPEWADWAAQIKAIKDKTGITVPPDNKN 60 MFLKRVIQTAAGALLLSASLAA AQTAICYNCPPEWADWAAQIKAIK+KTG+TVPPDNKN Sbjct: 1 MFLKRVIQTAAGALLLSASLAAQAQTAICYNCPPEWADWAAQIKAIKEKTGVTVPPDNKN 60 Query: 61 SGQALAQLTAEKASPVADFTYLGVSFGIEAKNKDLVAAYKPAHWNDIPNGLKDPDGYWVT 120 SGQALAQLTAEKASPVADF YLGVSFGIEAKNKDLVAAYKPAHWNDIPNGLKDPDGYW T Sbjct: 61 SGQALAQLTAEKASPVADFAYLGVSFGIEAKNKDLVAAYKPAHWNDIPNGLKDPDGYWFT 120 Query: 121 IHSGTMGIMVNVDALKGKPVPKSWADLQKPEYKGLIGYLDPASAFVGYVGAVAINQAMGG 180 IHSGTMGIMVNVDALKGKPVPKSWADLQKPEYKGLIGYLDPASAFVGYVGAVAINQA+GG Sbjct: 121 IHSGTMGIMVNVDALKGKPVPKSWADLQKPEYKGLIGYLDPASAFVGYVGAVAINQALGG 180 Query: 181 TLDDFSPAITFFKNLQKNQPIVPKQTSYARLISGEIPILLGYDFDAYRAKYKDHANVAFV 240 TLDDFSPAI +FKNLQKNQPIVPKQTSYARLISGEIPILLGYDFDAYRAKYKDHANVAFV Sbjct: 181 TLDDFSPAIGYFKNLQKNQPIVPKQTSYARLISGEIPILLGYDFDAYRAKYKDHANVAFV 240 Query: 241 IPSEGTVTVPYVVSLVKNGPHQAEAKKVLDFLLSDQGQAIWANAYLRPVRAAAMSKEAEA 300 IPSEGTVTVPYVV+LVKN PHQAEAKKVLDFLLSDQGQAIWANAYLRPVRA+AMSKEAE+ Sbjct: 241 IPSEGTVTVPYVVALVKNAPHQAEAKKVLDFLLSDQGQAIWANAYLRPVRASAMSKEAES 300 Query: 301 RFLPASEYARAKAVDYGKMAEAQRQFSERYLAEVK 335 RFLPA+EYARAK+VDYGKMAEAQR+F ERYLAEV+ Sbjct: 301 RFLPAAEYARAKSVDYGKMAEAQRKFGERYLAEVR 335 >ref|YP_004754420.1| putative periplasmic solute-binding protein [Collimonas fungivorans Ter331] gb|AEK63597.1| putative periplasmic solute-binding protein [Collimonas fungivorans Ter331] Length = 375 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 272/335 (81%), Positives = 301/335 (89%) Query: 1 MFLKRVIQTAAGALLLSASLAASAQTAICYNCPPEWADWAAQIKAIKDKTGITVPPDNKN 60 M L RV A A+ L+AS A AQ AICYNCPPEWADWA QIK IKDKTGITVPPDNKN Sbjct: 41 MRLARVFHAMAAAVALAASAHAFAQNAICYNCPPEWADWATQIKTIKDKTGITVPPDNKN 100 Query: 61 SGQALAQLTAEKASPVADFTYLGVSFGIEAKNKDLVAAYKPAHWNDIPNGLKDPDGYWVT 120 SGQ+L+Q+ AEKASPVADFTY+GV+FGIEAK ++VA YKPA WNDIP LKDPDGYW T Sbjct: 101 SGQSLSQIIAEKASPVADFTYVGVTFGIEAKKNEVVAPYKPAGWNDIPADLKDPDGYWFT 160 Query: 121 IHSGTMGIMVNVDALKGKPVPKSWADLQKPEYKGLIGYLDPASAFVGYVGAVAINQAMGG 180 IHSGTMG+MVNVDALKGKPVP+SW DL KPEYKGLIGYLDPASAFVGYVGAVA+NQA+GG Sbjct: 161 IHSGTMGLMVNVDALKGKPVPRSWQDLLKPEYKGLIGYLDPASAFVGYVGAVAVNQALGG 220 Query: 181 TLDDFSPAITFFKNLQKNQPIVPKQTSYARLISGEIPILLGYDFDAYRAKYKDHANVAFV 240 TLD+F+P + +FK LQKNQPIVPKQTSYARL+SGEIPIL GYDFDAYRAKYKD ANVAFV Sbjct: 221 TLDNFTPGMNYFKALQKNQPIVPKQTSYARLLSGEIPILFGYDFDAYRAKYKDKANVAFV 280 Query: 241 IPSEGTVTVPYVVSLVKNGPHQAEAKKVLDFLLSDQGQAIWANAYLRPVRAAAMSKEAEA 300 IPSEGTVTVPYVVSLVKNGP+ A AKKVLDFLLS++GQAIWANAYLRPVRA+A+SKEA++ Sbjct: 281 IPSEGTVTVPYVVSLVKNGPNPANAKKVLDFLLSNEGQAIWANAYLRPVRASAISKEAQS 340 Query: 301 RFLPASEYARAKAVDYGKMAEAQRQFSERYLAEVK 335 RFLPA+EYARAK VDYGKMAE QR+FSERY AE++ Sbjct: 341 RFLPAAEYARAKPVDYGKMAEVQRKFSERYQAELR 375 >ref|YP_002005452.1| ABC transporter substrate-binding protein [Cupriavidus taiwanensis LMG 19424] emb|CAQ69385.1| putative ABC TRANSPORTER, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 340 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 242/331 (73%), Positives = 293/331 (88%), Gaps = 2/331 (0%) Query: 5 RVIQTAAGALLLSASLAASAQTAICYNCPPEWADWAAQIKAIKDKTGITVPPDNKNSGQA 64 R + GA++ S AA+AQTAICYNCPPEWADWAAQI+AIK+KTG+TVP DNKNSGQ+ Sbjct: 12 RWLLPTVGAVVFSH--AAAAQTAICYNCPPEWADWAAQIRAIKEKTGVTVPHDNKNSGQS 69 Query: 65 LAQLTAEKASPVADFTYLGVSFGIEAKNKDLVAAYKPAHWNDIPNGLKDPDGYWVTIHSG 124 LAQ+ AE+A+PVAD Y GV+FGI+A+ + + A YKPA+WNDIP+GLKDP G+W IHSG Sbjct: 70 LAQIVAERANPVADVVYYGVTFGIQAQKEGVTAPYKPANWNDIPDGLKDPQGHWFAIHSG 129 Query: 125 TMGIMVNVDALKGKPVPKSWADLQKPEYKGLIGYLDPASAFVGYVGAVAINQAMGGTLDD 184 T+G+MVNVDAL+GKPVP+SWADLQKPEYKG++GYLDPASAFVGYVGAVAINQA+GG+LD+ Sbjct: 130 TLGLMVNVDALRGKPVPQSWADLQKPEYKGMVGYLDPASAFVGYVGAVAINQALGGSLDN 189 Query: 185 FSPAITFFKNLQKNQPIVPKQTSYARLISGEIPILLGYDFDAYRAKYKDHANVAFVIPSE 244 F PA+ FFK+LQKNQPIVPKQT+YAR++SGEIPILL YDF+AYRA+YKD ANVAFVIP E Sbjct: 190 FGPALKFFKDLQKNQPIVPKQTAYARVLSGEIPILLDYDFNAYRARYKDRANVAFVIPRE 249 Query: 245 GTVTVPYVVSLVKNGPHQAEAKKVLDFLLSDQGQAIWANAYLRPVRAAAMSKEAEARFLP 304 G++ VPYV+S+V PH AEA+KVLDF+LSD GQA+WANAYLRPVRA A+S+E E+RFLP Sbjct: 250 GSLVVPYVMSMVNKAPHPAEARKVLDFVLSDAGQALWANAYLRPVRAKAVSREVESRFLP 309 Query: 305 ASEYARAKAVDYGKMAEAQRQFSERYLAEVK 335 AS+YARAK +DYGKMAE Q+ FS++YL EV+ Sbjct: 310 ASDYARAKTIDYGKMAEVQKAFSDQYLKEVR 340 >ref|YP_586971.1| ABC transporter, periplasmic binding component involved in Fe3+ transport [Cupriavidus metallidurans CH34] gb|ABF11702.1| putative ABC transporter, periplasmic binding component involved in Fe3+ transport [Cupriavidus metallidurans CH34] Length = 340 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 243/317 (76%), Positives = 278/317 (87%) Query: 19 SLAASAQTAICYNCPPEWADWAAQIKAIKDKTGITVPPDNKNSGQALAQLTAEKASPVAD 78 S +AQTAICYNCPPEWADWAAQI+AIK+KTGITVP DNKNSGQ+LAQL AE+ASPVAD Sbjct: 24 SQGVAAQTAICYNCPPEWADWAAQIRAIKEKTGITVPLDNKNSGQSLAQLVAERASPVAD 83 Query: 79 FTYLGVSFGIEAKNKDLVAAYKPAHWNDIPNGLKDPDGYWVTIHSGTMGIMVNVDALKGK 138 TYLGV+FGI+AK + YKPA+WNDIP+GLKDP G W IHSGT+G MVNVDAL+GK Sbjct: 84 VTYLGVTFGIQAKADGVTQGYKPANWNDIPDGLKDPQGNWFAIHSGTLGFMVNVDALRGK 143 Query: 139 PVPKSWADLQKPEYKGLIGYLDPASAFVGYVGAVAINQAMGGTLDDFSPAITFFKNLQKN 198 PVP+SWADL KPEYKGLIGYLDPASAFVGYVGAVA+NQAMGGTLD+F PA +F+ LQKN Sbjct: 144 PVPQSWADLLKPEYKGLIGYLDPASAFVGYVGAVAVNQAMGGTLDNFGPAFKYFRELQKN 203 Query: 199 QPIVPKQTSYARLISGEIPILLGYDFDAYRAKYKDHANVAFVIPSEGTVTVPYVVSLVKN 258 QPIVPKQT+YAR++SGEIPILL YDF+AYRAKYKDHANVAFVIP EGT+ VPYV+SLV N Sbjct: 204 QPIVPKQTAYARVLSGEIPILLDYDFNAYRAKYKDHANVAFVIPKEGTLVVPYVMSLVNN 263 Query: 259 GPHQAEAKKVLDFLLSDQGQAIWANAYLRPVRAAAMSKEAEARFLPASEYARAKAVDYGK 318 PH E +KVLDF+LSDQGQA+WANAYLRPVR M K+ ++RFLPA+EYARAK VD+GK Sbjct: 264 APHATEGRKVLDFVLSDQGQALWANAYLRPVRNVPMPKDVQSRFLPAAEYARAKPVDFGK 323 Query: 319 MAEAQRQFSERYLAEVK 335 MA+ Q+ FSE+YL EV+ Sbjct: 324 MAQVQKAFSEQYLKEVR 340 >ref|YP_841115.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] emb|CAJ96385.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] Length = 340 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 242/313 (77%), Positives = 279/313 (89%) Query: 23 SAQTAICYNCPPEWADWAAQIKAIKDKTGITVPPDNKNSGQALAQLTAEKASPVADFTYL 82 +AQTAICYNCPPEWADWAAQI+AIK+KTG+ VP DNKNSGQ+LAQL AEKASPVAD Y Sbjct: 28 AAQTAICYNCPPEWADWAAQIRAIKEKTGVAVPLDNKNSGQSLAQLVAEKASPVADVVYY 87 Query: 83 GVSFGIEAKNKDLVAAYKPAHWNDIPNGLKDPDGYWVTIHSGTMGIMVNVDALKGKPVPK 142 GV+FGI+AK + AAYKPAHWNDIP+GLKDP G W IHSGT+G MVNVDAL+GKPVP+ Sbjct: 88 GVTFGIQAKKDGVTAAYKPAHWNDIPDGLKDPQGNWFAIHSGTLGFMVNVDALRGKPVPQ 147 Query: 143 SWADLQKPEYKGLIGYLDPASAFVGYVGAVAINQAMGGTLDDFSPAITFFKNLQKNQPIV 202 SWADL KPEYKGL+GYLDPASAFVGYVGAVA+NQAMGGTLD+F PA +FK+LQKNQPIV Sbjct: 148 SWADLLKPEYKGLVGYLDPASAFVGYVGAVAVNQAMGGTLDNFGPAFKYFKDLQKNQPIV 207 Query: 203 PKQTSYARLISGEIPILLGYDFDAYRAKYKDHANVAFVIPSEGTVTVPYVVSLVKNGPHQ 262 PKQT+YAR++SGEIPILL YDF+AYRA+YKDHANVAFVIP EG+V VPYV+SLV PH+ Sbjct: 208 PKQTAYARVLSGEIPILLDYDFNAYRARYKDHANVAFVIPKEGSVVVPYVMSLVNKAPHE 267 Query: 263 AEAKKVLDFLLSDQGQAIWANAYLRPVRAAAMSKEAEARFLPASEYARAKAVDYGKMAEA 322 AE +KVLD++LSD GQA+WANAYLRPVRA + KE +ARFLPA+EYARAKAVD+GKMA+ Sbjct: 268 AEGRKVLDYVLSDAGQALWANAYLRPVRAGVVPKEVQARFLPATEYARAKAVDFGKMADV 327 Query: 323 QRQFSERYLAEVK 335 Q+ FSE+YL EV+ Sbjct: 328 QKAFSEQYLKEVR 340